| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_1559393
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_10580 |
15 |
6533 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_10580
Contig Sequence (9263 bp)
>contig_1559393 9263 assembly3_WGSMorex_rbca.fasta
ATTTGGATGACGTACGGAAGAAGCACTATNNNCTTTATTAGTAGGTAAGATAAGATTTCT
TCTCATTGTTGTTGTGCGACAAAGCGGAGCACCTTCCATGGCCAGTTTCTTCAAAACAAA
ACATGTTTATCTTTCTATTTCTTATTTCATTTTATTTTTACTTTTCAAAATTTGCAAACT
TTTTATAAAATCATCATTTTTTCTTAAATTCTTGAGCTTTTAAGGTTCGAGAACATTGTT
ACAAATTCGTGAACATTTTCTTAAATTTGCACTTATTTCAAAACCATGAAATATTTTCAA
AGGCATAAATGTTTTTCAAATCCACAAACCCTTTTCAATTTTAATGGACTTTCTAATTTT
GCAAAAAATTTAATTGGTGATTTTTTTAAATTGATTTTTAAAAAAAATAACAAAAATTGA
TAATGCAAACATATTTTCGAATTTATGAAACTTTTATTAAATTATAAACATGTTTTGAAC
TTTTGAACATTGATTAAGAACAAAACTTGGAAATTCTGAATATTGTCCTAGTTTTTTAAA
TTTTGATTAATAAAATGAAAAAAATGATGTTCTGACCAGTTATTTTCAAAATATAAAGAA
TTTGAAAAATTATGTTTTTTCTAAAAAAGCTTCAAATATTTCGAAATTCTGAACAAATTT
TAAATTTAAATTTATGAAAAATAGAGATAGTAAACAAAAAAAGGAAATGGACACACTACG
CATCGACCCGTGGATCTTTCTAAAATATCCGTCGCCTCAACAACTGTCAAATTAACAACT
ATCCAGCGTCCAATGATATTCTCATTATTGCAACAAGGCTAATGTTGTAGATAACTTTGC
AATAAATCCTATTTTGCAGAAATCTTTTTCAATATAGGTGATATTGCAGATTTTTTTTCA
TCACTATTTATGCAACATGGGTGTTATTGCGGGAAATAATTGCAAAATAAACAATGTTGT
AAAAAATATTTACAGTTTTTCTTGTTCTTTATTTTTTGCAACATCAGTGTTGTTACGGAA
AACAAATTTGCAACATCCATAACGTTGCAGAAAGAGAAACCCAAAGTGTCACACAGAGGA
GGCGGCGGATCGCTCGTGTGCAATTAGCCGTATGAAGGTAAGCAATTCCCAAAAGGAAAA
GCCAATGAATAATAAACATAGAAAATAAAATAGGGGAGAAGATAAAAAGAATAAGGGAAA
AAATATTGTTCATGTACATTCTAGAAAGTTCCCAAAACCGGATGGGAAGCTGAGTTTATG
AAAACCGGGAACGCTTTATTTGCACACACAAAAATGAACAGTTTTTAAAACTTTTCAATA
AAAAAATCAATTCAATGAACATTTGTTTTCTAAATTGATGAACTTTTTTTCCCATCTGCG
AGCGCTTGGGCGGGCCAAACGGGCATAATGACTGGAGTGATGCCGTCCCCTAGTTGGGTC
AAGGCTTAAGTTTTTTGCTTTTTGCTTTCCTATTTTTTTCGTTTTTTCTATTTTTCCGCT
CATTCATTTTTCTCCTTTTTGAATTCTATTTTTATTTTTGGAAGAAAAAAAAATTTGTCT
GGAATAATAAAATAAATGTTTTAAATTATGATTTTCAATTCTTTTTCCCTTCAAATATTT
ATTAAATCATGTCCCTCCCTTTCATCCAAAAGCCTGCATGCACATGTTTAGGGGTTGTTG
GACTGGATGTACAATTTGTGTGGCCACTCATATTTAGTTCAAACTTGCACCAAATACTTG
CACCAAATACCGGTGGGCACAAAAAATTATATCCATGCAAGGTTTTCTCCTTTTTCGAAA
CAGAAGCAAAAAATATGAAGATGAAGGGCAAGAGTTGCAAACGTGAAGAAAAATATTACT
GTCCTGGCATCAAATGACCCAATGTTTCATTCCCATAGTAACCCAAAGTTTAGCCTTAAT
CTTAATGTTGGCAGAAAGGATGGTGGGCTACCACCTCAATCTTAATGTCGGCAAAAAGGG
TAGTGAGCGTCTTGAATTTGTTGCAGCAAATTCTCGCATTTCTCTCATTCTAAATAACAT
GCACCTAAGGGAAGCCATCGTCTTTCAATGCATAATCGTCTCACTAGAAAAGCCCGTCCA
CCATCCACCACATCGCCTTCCTATGCATGCTGGCAAGTGTCCATATACCAATCGTAGCCA
AACTTTCAAAATGCCGAACCTTCAACATCTTCCAAAGACGCACGGTTACCAGCACTGGCT
TGACCAGATTCCTACTTTCATGTCGAACTGTGTAATGTCCTCCAGTTCGGTTAACAAAAA
GCTCCTCCATCACGAAACCAAAAGGAACACCAAATATGAGTTGAAATGTTCATCCATCAA
CCAAGATAAAATGGGGGCCAATTTCTCACACAGAAGTACTTCCTCCAAGAAGACTATATA
CGGATGTATATAGACATACTTTAAAAGGATGATTCACTCATTTTGCTCCATATATAGTCC
CTTGAAATCTCTAAAAAAAACTTATATTTAGGAACAAAGGGAGTAGTAGTACATTCTAAC
AGGTCCATGTAGCCCTGAGGGCAGGATTCAGTACAACGTTCAACAACCAAATGTCTAGCT
AGATTAAGTCTCACATGTCCAGAGCGCTAAGATGCATTCCATATGTAGAAGAACGATGAG
CTCATCTTCCTATTGGAAACCAGGAACAGTCTAGTCTGTCCTGACACCGATATGCTCGAG
AGATCTTGCATCAGCAAGCAGTATAGCCTTCAACACAGGAAGCATGTCCTCTTTTTCCGT
GCAGTGGATCACTGCCAGGTGGCTGGCATCAAATGATATTCCCTTAGCCGTGTAAATTGG
CTGCTTTTGATCTTCAGTCATACTGAAATTTTTAAGAGTAAAACATATCAATAAGAATTC
CTCTCTTCGCCAAGTAAATAGACAAGGGCAAACGCTGAGTGTTGTCAACCACCTTGAGCT
TCAGATCAAGAATTTAAAGCATAGGAGAGTGCTCGAAGAAGCAAGCTAAATGAGAAAAAT
TATTGGACAAACACCATTCTCCTTCACATATGTAAATCAAAATAAGCACAAGTTTTAAAG
AAATAAATATTTCAGACATGTAAAGAGATTAAGAAGCACCCATACCTGCCTCACTTGACC
TGAAAATTCTACGCTCTTGGCATTTGAAAGATAACATTACTGTTGATGTAGTTCGAACTA
TTTAGGGTGTGCACCCGCAACAAGTGTCCTTGAAGCATTTATAACTAAGCAGTTTGCAAA
TACAAATCAGAAGATTTATAACTAAGCAGTTTATTATTTCCAGAGTCTTCAATGACTGAT
GAAATCTCAGGAAAATCAGGAGTGCTGTCTGCCAACTGCAGATTTTCCAAAGATGGGCAT
TCGGTGCTGAGCTGATCAAAGAAACTTGTGACTAAAATAACATTAACGAGCTTTATACTT
CACAGATATGAAGATGCAAAGTTGATAACTCGAGGGTCTAAGTAAAAAAGCTTGCCATCT
TCTACTTTCAGTGAATTCAATCGATTTAACTTTGTCACACCTGATAGCATGATCGATTCG
AATAGTTGGCTGCATAAATGGCAAAAGAGTGAAGGCGGAGAGTGTCCAGTGTAGCGTTAG
CAATACCCCGCCGCTCAAACAAACTTTCTGCAAACTTGTTGAACTTTGATCTGTCCATAT
CAAAGTGATCAATATCCATATCAAGGCATGGGGCTGAAGTCCATAATGGGTGCCTTGTTC
GGGATAACATGCTTGTGGCTTGTGCGTACAACCCCCTGTGTAGGGATAAAGCACATGATA
TGGAGCATGCTCTCATGAAAGACGGTAATCGTGTCATCATAGCAAGGCTTCTCTTCATTC
CCTATAGGAGCTTGATCAAACAAAAGGGTAGATCATACACGCATCACAAGTTTGCTATTA
GCCGCATAAATGATGAGGCATGCGACTCCAGGAAACAAATATCTTTTTTGAAAATGCATT
TGAAGGACGTAATGACAACAAAGTGTGAATGATGTAAGCAACAACTAAAATCATGAAGGG
ACATACATGTTGCTATTGTATTACCACTAGATAGCACCCCCTGAAGGTTACTCTGTGCTT
GAATGATTTGACTACTACAAATTTGTTGCAGAAGCATCACAGCTGAGAGTTCAAACATTT
GAGAACGCAATCTATCGTACAGCTTATAACCATAATCAGCCTGGAAATAAAAACACACAC
CAAATCTTTTAGCTTGCAGTATAAATTGACATTCTTTCAAAAGCTCAAGGAAAAAGAACA
TTAAATGAAATAAACCTTCCTGCCATCCTGTGAAATGACATACCAGCATTCACAAGGTAT
GCAGAAAGCATACTAAATATTATGCTTTAGAAGACATAATGGAATGAAAGTTGACTGGAG
AATGAGCGGTACTTACGGCGAGTACTTTAAAATATTTTTCGTAGATATGCAGAAGGCTTG
TGTATCATTTCATTGCTATCTAGGGTTAATCAAGAAAATTCAGTGCACATGAGTGCACAC
ATGATCGCTCGTCCAAGCAGTAGCACGCACACACTAAACGCCAGGGAGGACTGCACACAC
CCCTTTCATCCCCAATCTGCTCCATGTCTGCGCATCGTCGACTATTGAAGGTGCAGTTAT
TCCAATGTTTCCACAACCATCAATGCCAATCAAGTGTGGTGTCCCTCGGGATCTTCGCAG
ATGAAGGCCGCCAACTAGGCTGAGAATGCCTTATCGCCATTGATTATGGTAGGGATGCTA
TAGGGTGTGTCGAGGACAAAACCGAGTCTGCCTTGAGAATAAGCAGTCTGTCATGATGTG
TTGCATCATTTCCGGTAGCATACATGCCAGATAGTGCAGCAATCTCAGGCATGCCAGACT
CTCCGTTGTCTAGTACTACCTCCGAACCATAACAAGTGTTGCAGTTTTGAACTAACCCCG
GTTCAAAACTGCGACACTTATTTTGGGTCGGAGGGAGTAGCGGTTTTGGCATGCCAGCAA
GGTGAAGAATATGATGGGCTAGGCGCCCATGACTTCTCAGTAAGCTTCCAATGCTGGGCC
CAGAACGAGCCTTGGAACAGGGCTGAGTTGCTAGTCGTGTATCATCCACACTGAAGAGTC
TGGCTCGCCATGCAGCTGAAAGTGACAGAGGGCGACTTGACACTTCAAACCGTGTCAACT
GTACAGTGAGCTGTCAAGGTCAACTCTTTAGTCTTCAGTACCAGAAAAGTCAGCATGATT
AAAATCATTCCCGTGGAAGGAAGAAAGAGTGATCCATGTCAAAATCCTTTCATAAGTTCC
CCACAGGCAGCAGTAGTTGCCGGCAATTATAGTTTACTTTTGTAAATGTGTTGGGACCAG
AACTCGAACAAGGTTCATGCAACGAGCTCAGGTAGCTATGCAGGCTCAGTCCCTCTATCA
TCAAGCAATACCTTCACTCATGCACGGCTAGGAAGTGGTCAAGCTGTGGATCCAATGTCA
TCGTTGATGTTCCAAACTAAATAGGAAACGGTGGTATTAATAAGGGGAGGGCTGCCTGTG
GTTGTCACCAATTAGTGCATGGTTAATTCCCTCCCAACCATGGTAATACATTAGACTTGT
CGTCCAGTTAGTTATATTCTTATGTAGTGAACTCCTGTGCCTTGACCTATTACTGAATAA
ATATACCATTGGATATCCAAGAGAAGGTGCGAAGCCCAGATCATGTGATAAGTCACAGAC
TAGTAGGCTGATGCACTACTGTTTTAAGCTTTAACATGCCTAACACTAACAGCATATCAA
GATCCATAAAAACGTCAATGACAGATTACAGAAATGGAATATACCTGGTTAACAGCTACT
GCAGAAATAATACTCTCAATCTGGCAGCTACATCAAGAATCTGGCAGCAACATCCAGAAG
ATATTGCTAGTAACCTCCAGTGCGATTTCTCGGACACATCTGGTGACAGTACTACTATCA
GAGCCTCTGATCTGTGCAGATAATATTAAAAAGTAATGAGATATGTGATACATCTCGTGC
ACTTCCAAGTTCAAACAATAGCACTCCAAATAACATGATAATATGATGTGCTCCGAGTGA
GCAACCAAGAACATGTAGGGTGTGTGTAAGAAAAAACCAATGCACGTTGCATACATCTAC
AAGAAGCCCTTAATGGAAATAAGAAGATATACAGGTCAAACTAATAGCTGAGTACAATCA
TACAAATCACTGTTTGGATATCAAATCAACATTTGTATCCACACAAAATGGTTGGAGGTA
GCCGCCTTATACTTTTCACTCTGAATAAATATGAAATAGGAGAGAGAAGTCTAACAAGCT
ATGGATTAAAAATGACAGAGGAAGATCCGTTTTTAATTTATAGCCTGTTAGTATGTAGTA
GGTCTGTCAGTTAATCGCTGGACTATGGCCGAAGTCTGAACTGTCATAATGGGCTACTAT
TTTTAGAAAATAAAACTACAACAAAATGAATAAATGTCAAAGAGCACAGATGCGGGTATG
AAAACATACACCCTTCACAACACAAAAATCTTCTTCCACTAGTATGATACCTCCTTCATT
CAGAATATGGTAGTAAATAACCATAACACACAAAGAATAGAAGTACCGGCTGTTTTTTGC
TCAGAATATTTCTATATTTGACAAAGGCAAAATAGAACATTCTGTTTCCACAAATAAGTC
CTGAAAAGGCTACACCTGCTACCAACATCATCGTAAGATCCTGAAGAATAAGCCAAAGGC
CCAATCAAAAATTGTGATCAATGACCATGTCCTTTGCTTGATCTTCAAGAACTTAACAAA
AGGTGAGATATGCTCTCATCTTGACAACACCGAGAATTTCCATCAATCCATCACATCCAG
ATACATCTATGACGGCGAGGAGCATGTAGAAACCAATATTACATATATAGCAATGCCAAT
TTGAGTGCAAGCAGGATAATACACTAGCAAATGAAAGGGGCAGGGGGGAGGAGAGACAGT
TCTCATAGCATTGAGATGTGAGACTCACGAGTCTCTTTTCCTGATTTGGGACATCGAGTT
GGCACTGCCAGCACCTCCTCCACCGAAGGCCACCTCCATGGCACCCAGGTTCAAACTATG
GATTCCTTCAGGACTTGTGGGCCAAGAGAAGAAGCTGGATGCGAGTATTATGGGCTGGCT
CACGGGTCGGCATGGATGACATGTTGAGCAAGGTCGTATGACCACGTGAATGTCACTTAT
TTGTCAGCAAAAAAGTAAAAAAGTTCATTATGAAGAGTTCACACTGCTTCACACTACTTT
ATCGCCTTTTTCCTTATAATGTGAAGGTGGCTTCCCCAACGTTATTCAGCGAGGCAGGTA
GAAGGTCGTGTCAACTTTTCCACTTCATTCTCCACTGGACAGTAGACCCCACATATTAGA
TATAGAGAGAAAAATGGAAACCTTCGTTTTTCCCATGGCGACCCCACTCTGCCATCCATA
TCAAGCTAGGAATAACGGGAAGAAACAAAAGTAGTGGGGCGGGGGTGGAAAATAAAGGTT
TTCATTTTTTCTCAGTATCTAATATGTGCGGTCTTCTGCCTAGTGGAGAATGATGTGAAG
AAGTTGACAATTTGCTAGCCACCTCGCCAAATAACGCTTACAAAGCCAAGAACGTCCTCA
TTGTACGGGCAAACTAGTGTTAAGAAGTGTGAACTGTTCGTAATAAACTTTTGTACTTTT
TTCTGAGAAATAACCGGCATTGGCACCATTTGACCTTACTCCAGATGTCATTCGTGCCGA
CCCCCGAGCCAGCCCATAATACTCATCCAGCTTCTAATTCTGGACCACCAGTCTAGATGG
AAACCATAGGTCGAACCTGGATGCAATGGAGGTAGGGTTCGATGGAGGAGGAGGTGCTGG
CAATGCCAGCGACTAGAGGTCCCAAATCAGGAAAGGGATTGACAAGTCTCACATCTAAGC
GTTGTGAGCACCATTTCTCTTCTCCCCCTTGTCATTTGATTTGCTAGTTGTTTGGTAGTA
TATCATCGTGCTCACACTTCAAATTCTTAACGCTATGTCTGTAATTTTGGTTTATGCATG
CTATTGGGCATGATAGATGTATGTAGATGTGATGGATTGGTGGAAAATTTGGTGTTGTCC
AGATGAGAACATATTTCACCTTCTGTGAGGTCCTTAAAGATCAAGCAAAAGGCATGTTCA
TTGATCACGGTTTGTTATTAGAGTTGTGGCTTATTATTCTTCAAGATCTTGCGATGATGT
TGATAGCAGGCGTAGCCTTCAGGACTTATTTGTGAACACAGAATGTTCTATTTTGCCTAT
GCCAATTATAGAAATATTTTCAGCAAAAGAAATCTGGTACTAGTATTGGTACTTATTCTT
TGTGTATTATGGTTATTTACTACCATATTCTGAATGAAGAAAGATTATGTGGTGGGATGT
GTTGCGACCCACATGTGGCCGCTGGATATCGAGATGACAACCGGAGAGCTACGAAGGGCA
TGGCGGCTAGGCAGATGCCGATGCAGCAGCCCCGTACTGTGATGGTCTATGTGTGTTGAG
TGTTGCCAATATTGCATGGTTCTAGAAGCACGCGTCCTTTCACCAGAAATATCAAGTCGG
CTGAAACCCGCTCCTAATTACGATTTTGGTTTTTCTCCCCATTTGACACAGGCAGTAATT
GTGTTGTGGTACTTTGTGAAGCGTCTTTTGTGCTCCTTTGGGAGTATGTCATGGTCTTTC
TGCCCTCCTTGGGTGGGCATGCCTGATCTGGTTTGCTAGGTGGAGGAGGCGAGAAGGGTT
CGATGGGTGGAGGGGGCAAAAAGGATTCGATGCGACAGAGTTTTCTTCAACAACATTCAT
TTAGGTCGTGTTTGGTAGCCTGCATGGAGGAGCCCAAAAGTTCCCTTCCCGGCCCACTTT
TCGTTGTTTGGTAGGGTGTATGCGCTGAGTAGAGCATAGCTCAACTGATGCAAAAAAGGG
CCTCATCTATGCTAAGCCAAGCACCCTCTCGAAGGCGAGCTAAGGAGAGCTATACTGAGC
CCAACACCCTCGCCCCGCCTCGCCTTTACCCTGGCCGCCTCGCCCTCGCCCTGCCGCACC
CCGGCCGCCTCGCCCTCGCCCTCCCGCGCCCCTCCCGAGCCCCGTCGCACCGCGCCCCTC
CCGAGCCCTGGTGGCCTCGCCCTCGCCCTGTCGGCCCTCCTCTTCCTCCTCCCGAGCCCC
ATCGGTGGCGTCGCCCGTGTCCCGCCACGATCCGACGGCCTCGCCCTCTTCCTCCCCGTC
GGGACTCCTCTCCCCGCGCCCCG
