Contig Data
morexGenes
Links



Map Locations of contig_1559354 (4852 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1559354

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10557 1 1849 bp MLOC_10557.1 Available Available LOC_Os05g38560.1, FRAME:-2, EVALUE:2e-17, 13105.m04047 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative





CDS Structure of MLOC_10557






Contig Sequence (4852 bp)

>contig_1559354 4852 assembly3_WGSMorex_rbca.fasta
CTAGCCAAGAATACTACCAGCACAATCAAGAATCACACAAAAAGGAATTAAACATAGGAA
GATACAAGGCTGCAAACTTTCCCAAAACCATCAGGTTACAGGGACTTGGTGAAAATTCCT
GCACCTGCTAGAGTGATAGAATCTTAAACACCACTTTATGCGTTATTTCATAAGGGCCAG
ATTTGGGTGCATGTGTTACATGCTATGGTTAGATTTATCTTAATTCTTCTTTCGTAGTCG
TGAATGCTTGTGAGAGGGGGTAATCATAAGTGAGTTGCTTGTTCAATTAAGAACATCACC
TTAGCACCGGTCCACCTACATNNNNAATTATCAAAGTAACGAACGTGCATCAACTCAACA
TAATGAACATGACCAGATGGAAATTCCCATGTGTCCTCGAGAACGTTTTCCTTTATATAA
GAGAACTTTCAGGATTGTCCTTTGCTACAAAAAGGATTGTGCCACCTTGTTGCACGCTTG
CTACTTTTGTTACTTATTACTTGCTACCAATTATCTTGCTACAAAACTANNTATCATTGT
TACTCACAACACTTGCAAAGAACCTTGCTCAAAATTGCTTATCATTTCCTTCTACTCCTC
GATGGGTTCGAGTTATCGAAAGGAATACGATTGATCCCNTATACTTGTGGGTCATCAGCC
ACCACTACACGAAGTCGTCATCACTATTACCGCTAACATGGGGATTCTAGAGGTCTTCAT
GATTGCATACAAATGTTACCTGAACTAGTTCCCTGGCATAAACTCATAAGTGAAATCGTC
ATCATCATTTGTGCCCTTCGATGATGCTACACTCTTACTTGATGTACCACTCTTCGAGCT
GGCAGAACCACTGGATCTGTTCCGAGCTTTCTTGCTAGGCATAAAGTCATCATCGTCGCT
CTTCAGTTTCTTACAGTTACTGTCACCCCTCTCAGATGCAACATGAGCATTGAATTTGTC
CTAAGATCGTTTGCTTAGACATAAAGTCATCCTCAACGTCTTCAATCACTTCCTTGGAGT
TAGCGCCACCCCTCGCTGATGCAGCACTCTGTCGTGCTACCCTCACCTCTGGTATAGGGC
CCCACATACACTTCATTCATCCAAAGTTGAAGATATTCTTTTTCAATAATTCCGCATCCG
TAGGTACCTCCGAAAATTAGAAACAACAATAAAAAAACATAATTACATAAGAGCATGGGA
TCTAAATGGGTACAATCTAAAATGAAATATCAATTACCTTAACGTGGTGCTCATGTTGCT
TATGTGGGAAGCTCATTCTTGGATTGCCAACAAGTAAATGCCTACCAGTAATGCGGGGCA
CTCATATGTTTTAGTTCAACAATCCTATCCCACCTTCCACGCAACCGGAAAAGTGTTTGC
CGAATCTCCTCTGAGTTGCTTTTTGAGCACTTCTTCGGGAGCCTCGGACGGGAAAAACAC
TTACCCAACTTCGTACGGTGCCTATCACTACAAACTAATTCTTCAAAACACACACCTCCC
CTAATAGGCATTTGGTTTCTGACGACATTGTACAAGAGCAAATGAGACATCAGTGGAGTA
AAATCGCGGAAATTGTCGCCTAACATGACTGGAAATATTGCTAAGGAAAGATGCAGAAGA
TAACATGCGAGGGGGAGGGGTTATAGAATGAGGATAAGGGGTTGGAGGGAAAATTAGCAG
AAAGGATGGTGGAAAAATATGAGCGGGAAACAATGGGCGGAAAAAGAATGGGAACGCTAA
ATGGTTAAGGTGGAAACAATGTACTAGCGAGAAAAACAAATTGAACAAAAAATACTCTTC
AGCCTAGAGGACACCAAATAGGGGTCTTCGATCTAGTGGAAACCGACGAGAGGTGTCATG
CATCTTCAGTCACCAGTTTACGTGAAGAGGTGGGCTCCTGAACACTCTTTGGCCTCGAGT
AAACCAGAGATTGCTCTTCGGCCTTGGTCCATCGATTTTCGGCTAGGTACAAGCCGAAAA
CTGTTCTTCGGTCTAAGGATGGACGAAAAGTGCCTCTTCGGCTAACACCGAAGACCAGTC
TTCGTCTTGAGCAAGGCCGGCGGGGTCATAGTTTTGATTTATTTGAATTAGGGCACATCT
TTTTGGATACTTTTTTAAAAATATTTTATAAAACATCGGAATTGTCCCTATGCAATTGGT
TACTAGAAAGGTAGTCATCATTGCAGTTTTTATATGTGGAAGAGGCATATACTAATATAC
TATCCGTATTTGAAATCATATGTACTTATGATTGAAACTCTAGCAAGCATCCCAAAATAC
TAGGAATTTATTAAGGTAAAATCCAATCATAACATTAAGATAAATAGAACCCCCTTCATC
CCGTATGTATCAATCCCTACACTTAGCCATGCTAATATTTGTCACTTCGGTCAGCCTATG
CATAGTTTTCTCAACATACAACTAGCCCTAAAGTGTGATCCACATACAAGTAACCAAAGT
GACGGTATTTACATCAGTACATGTATTAGTTTGTATCGATTCTTGACACAGTTAAGAAAA
TCTACTTTGCTTCGAGTAGTGGGTTTAGGCTAGCTTCATTAAAATCCGATATGATCTGAG
GTGCAAAGTTCTCTGCATTTGCGATCCTTGCAGTTCTACAGATATGCTAGGCATCTGATA
AATACATCCAGCAAAAATGCAGTCAGCTTTATTCCCCTTTGCCTTTCATGCTAACTCTAT
TATGTTTAACAGATTCAGAATCGTCGCAACGTCCTTGACAACGATGACAAGCTGGTAAGC
TTAGTGTAGACTATCAATGGCAAAGCTTGAAAGAAATCTTTGGAGGGGCGAAGCGGTAAA
AAAACAAATACAAAATTATACGAATACAGCAAGTTAGATATTGCAAATATCAAACAACTT
CGATAATTATATTGATATATTGATCTTCTCCAGATTAGCTTACAAAATACATTTCTAATC
AGTAGAGACTTCGGTTCACTACAAAGTGCTATTTAACCATAGAGTATTCAGTTCACTGCA
GATCAGCTTTTCATGTGCATTGTGATTTGAATCAGGTTGGGGCCAGATTTGAATCCAAGA
ACTCTCTAGTTGCAGCTGCCCAAGATTTTGGTGCCCCAAGGAATCTTAATCCAAAAACAC
TTTGATTGCAACACTCTAATTCCAGCAAAATTCTTACAATAGGATATAATGGTCAGAACA
CACGCGAGCATCCAACTACAACCACAGAGCAGCACCGGGGTCAAGAAGCCTTGGTGCCCA
TGATGCTGGCAATCTGAAGCTACACCAAATGTGCATAGAAGGCATCTGAGGTTTCCTCAG
TTGACAGCAACAAAGCATCGCTCTAGAGCCATTTGTCAGCACACAAGTGATTGGAAACGA
TGTCAGATTAAGGAGTGGTTAACAATGATGTAAAAACTAACACTATAGGTGTAGCTAGCG
ATTCGGTCCTGAAGCAAAGCAAAGCAGAGCAGCTAGCGATTCGGTCCGGAAGCAGAGCAA
AGCGGAGCAGAGCAGAGCGAAGCAATGTGAGCGCAAAGAGAGAGGCATGAGGGTCTGACC
TCTCGAGGATGAACTTGCCCTCCTTGTACCTCTGGTCCTTCTCAAATGCAGACACTTGAC
ACATAGGTAACCATGGCCATATTGAGTGCTCACACTACACAACCAATCAAACAAAGCCGC
TGAAATGAGGAAGATGGATGGAGGTTCATGTTACGGACGTATTTCCAGCCGAGGATGGCT
CCGCAGGCGACGCAGAGGATGTCGCGGACGGTGTGCAGCCGGTGGTCATCATCCGATCGT
CCTCGCTCTCCCCGGCCACCACGTTCACGCTGTATTTGCCAACGAAGGAGGAAAGCGGTA
CATACACAATGAACAGAGCACAAAGCACATCAAATCTTCTGACTGAATGATAATGCAGCA
GCAGCAGCAGCCGTGTTACAGACAAGAACAGAGCACACAGTAAATGAAACAGAGAATACA
GTAAAGAAAACAGAGCACAGAGCAGAGAGCAGTAGCAAGATGGTGGATAAAAATGGAGAA
GTATGAGCAAGATTCAGGCATGGTAGGCATGGCGATAGATCACTTACACCTTGTCCAAGA
GGTAGACCTTGCCGTGCTTGCAGCGGAACATCTGGCCGGCCAGGGGACGGGAGACAAGAA
TGGATGTTAAGCACCAAATTAAAATGGAGAACGGACGGGAGACAATAATCTTGTTCAGCA
ACAACATTTCATTTTTCTCGAAAACAACTCACAATTGCCATTTTCAGAGTAACACCATCA
AGAATAACACCAAGATGCTGCTCAAGATGAGCTGCTGCTGCTAATACTAATTGCAGAGTG
CCAAAAACAAGAACAGGACATGGCACGGCAAGCAGTTCGGTTGATCTTACTACCTCCGTG
CCAGCAGGAAATTCAGACCAACCGACTGAACAACACTGGGTTCTCAACATTGGTATGCAC
CGCATAATTCAGTTCTTAGAACCAACGGCGACAGCGCGCATTCAGAAATTCCCATGAAAT
TCAGTAACATTCAACGAGGCGACCGCTTGCGACATTAACATTCAGATAGTTTAGCAAAAT
CAGCTCATACAACAAACGAGCCAACAAAGTGTTGGCAACCATACAGCATTCAGACAACTA
CGACTACTTCTACTTGCAGATAGATAACCAGAGTCAGCAACCACTAAGAGGAGATAACAG
CAACCAACCACATCTGTTACTTCAGGAAACACACGCATCGGCAGTCTAGGAGGAGGTGAA
CTTGGTGACTGCCTTGGTGCCCTCGGAGACAGCGTGCTTGGCGAGCTCGCCAGGGAGGAC
GAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTG