Contig Data
morexGenes
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Map Locations of contig_1559233 (1958 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1559233

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10502 3 1316 bp MLOC_10502.2 Available Available LOC_Os04g44950.1, FRAME:-1, EVALUE:5e-74, 13104.m04498 protein short-chain dehydrogenase/reductase, putative, expressed





CDS Structure of MLOC_10502






Contig Sequence (1958 bp)

>contig_1559233 1958 assembly3_WGSMorex_rbca.fasta
TATTAATTTGACATTGTGAATGTTGATACATGTTTTTATAAATTTGGTCAAAGTAGAGAT
ACTTTGATTTCGGACAAAGCTAATATGCAGACTAAAAAGGACCGGAGGAAGTACTACTCA
AAATCTCAAACCATCGTAACATAGCTCACACGAACGACGCCTCCTCGCCCTTGGTGAAGT
ACTTGCCGGTCGGGCCGCCGTCCGGCAGCAGCGCCACCATCACCACGCGCTGCGCTCCCT
CCTCGGGCGTCAGGACACCCGAGCCCATGCTCATGTCCGTCTTGACGTAGCCCGGATGCG
CGCAGTTGACGCGCAGCATGGGGTGCCTCCTGGCCAAGATCCTCGAGTAGGCGTTGGTGG
CGGCCATGGCCACCTTGTACGCCGAGAACCCCGTGGGCCACCCGTGCGTCTCCAGCGCGT
CGCCCTCCTCGAAGTCATTCAGGAACTTGCCCAGCAGCTCGTCCAGCCTCTCCTCCGTCA
GGTTGTCGATGTCGTTGAGGTCCCGCCTCGCCTCCTCGTTGCTGATAAGCTGCATTTATA
TATGTACTTGATATCGAGGTAGTAGCATTAGCATGATCGATGGAGTTTGGCAGAACATGA
TCAATTAAGTTACCCTTAGCAGTCCGTATTCGGAGGAGACAGTCACAATCCTTCCCTCCT
TGGAAGATTGCAGCAGCGGCAGCAGGGCTTGGGTTACATGCTTGGTGCCGTAGTAGTTTG
TCTCCACGGCTTTCCTTGCGGCGTCGATGGGCTCCCGGACATTCTTCACCATCCATTCAA
GTCTCTGCTTCGAGTCCAGGCCGGCGAACTGACCGTCGTTGGCTTCGAGTTCTTGCGGGT
ACTCAACCCCTCCAACACCGGCATTATTGACCTGCAAATTACAGCGGTTGCTTGAAATCT
TGAGCGACGGACGCGCCGTTATTTGCATGAATTTGGAAAAGCAAACGGAATTAAAACTTG
CCAGGATGTCGAGCTTGCCGAAACGGGTGTCGAGGAAGTAGACTAGCGTAGCGATGCTGG
AGGCGTCCGTGATGTCCAGCTGATGGAAGACGGCGTCGGTGACACCCAGCGCTCTGAGCC
TCTCCGCCGCCTCCGCGCCCCTCGCCTCGTCCCGGGCCGTCAGGACGACCGTCACTCCTC
CATCGACGGCTAATTGCCGGCACACCTCGAAGCCGATCCCCTTGTTCCCGCCGGTGACGA
CGGCGACCCTAGCAACCACGCGCCGCAGATCAGAGCAATACTGCTTCGAGGCAAGCCTGC
ATGGTGGCCTAAAGAGCTAAGAATGCCTAGGTAGTCATGCTAACCTTGTGTTTGGCCGGC
TGGAGATGGCTCCTTCCATGAGTGCTACTGCTCGTGCACGACGACCACGAGCTCAAACAA
GAAGATGATTGGATCGGATAGCGTTCTCTCAATCATCAGATAGGCACACGGGTAGGCCAT
CATGCAAGCCAACAGCACATGCGTTGCTTTCATAGAGGCGGATGGCATCATGCTTTGACA
GAGGCGGACGGCATCATGCCCGCCAGCAGCTCATGCGTTGCTTTCACGGACAATTGTGCT
TCGAACAACGAAAAAAAATAGCCCGCTACAAAGTATAACTAGACCCTTCTACCCAAGTTA
GAGCAACTCCAACGCGGCAACAGAAACAGACGCGCGATTTGTCCGCTTTTCGTTCGTTTG
GGTCGGCCAAACGGACGCTGGTGTCCGCTTTTTTAAATGGACCGGTCAGTTCGTTCAACG
TAGGCTCAGACGCAAACAACGATAAACATAACTAAACATTAAAAGACCGGTCAAAGCCGG
CTCAAACCCACATAAAACATAATTAACATAAATAAAATACGCGTACAACTCGGCCGCCCT
ACGTATCGTCTTCGTCGTCGTCGTCGGGGGAGGTGAGGTCGATGAGCTCCGTGGCCGGCC
CAGCCTAAGGGAACGCTGTCTCCCACGCCTGAGCAGCG