| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1559008
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_10408 |
1 |
916 bp |
MLOC_10408.1 |
Available |
Available |
LOC_Os01g19770.1, FRAME:+3, EVALUE:6e-77, 13101.m02149 protein mitochondrial import inner membrane translocase subunit Tim17, putative, expressed |
CDS Structure of MLOC_10408
Contig Sequence (3316 bp)
>contig_1559008 3316 assembly3_WGSMorex_rbca.fasta
TAATCCACCAGCTTGTAATATTGCAAACGGTCGACAAGCGTCCGTTGCTTCAATATTGCG
CGAGACACCTCTAAATATTCATTTTCGTAGGTCTCTACTTGCTGACAGATGGATTAGTTG
GCTGCATCTTTTATCTTTTTTTGTTTTTGTTGGACATGTGAGATCTACTTTTCTAAGTGA
GATTTTTTTTCACGATCCGAGAAACATAGACAGACATTGTTATATGAATATACGTGCGTG
CACGTACACATCTACTAGTTGTATAAAAAGATGAATGCAAGAATTTTAAAAATTGTAGAT
CCGGTCAAGATTGGGTGACCAAATTTCAATTGAAGACCTCAATTGATTGTGAGGCTTTCA
ATCCTAAAAAGTTTAATGATATATAGTATATATATATATGCAAATTTCTCAAGAAAAAGA
CTATATATGAAAAAGGAAAGGTGTGAAACGGGAAATAGCCGCACACCTCGCCCGGGCGGT
AGTAGCGTGGTGACCACCTTGGCTCGGCCACAACGGCTCTCCTGCCACGCGCCCCTCTAC
CTCCAAGAACGCCGAGAATCGTCACGAAGGCTCTGCCGCCTGCCGGCACCACGGGCTCGC
GCACGCACAGCCCGCCACGACCACCATGGGCGACACGTCGCCGCGTGACCACCCACACGT
GTAACCCCCCGCGTCTCCCCGGCTCCGTTCATAAGACCGTTCCCGTCGCCTCCACCGTTC
GGCACTTCTCCATCGTGTATCGCCGGCCAGCCCATACGAGCAGCAAGCGAGCTCAGAGAG
AGGTAGAAGAAGACACGGACGCTCGAGGAGAGATGGGCAGCAGGCTCGACGCGCGCACGC
TCAAGGACGAGGTGGCGAGCATGGACCGGCGCCCGCTCCTCGACCTCGGCCACCCGCTCC
TCAACCGCGTCGCCGACAGCTTCATCCGCGCCGCCGGAGTACGTGCCTGTCGATCTCATA
CGCGTGCTCTGCTCCATTGTTCTTCTCCTGCTCGCTCCGTGTTTTAAGTTTAACTGATCT
GACTGCTCCGGGCTGGCATGCATGCATGGCAGGTCGGGGCGGCGAGGGCGGTGTCGCGGG
AGGCATACTTCGTCACCGTCGAAGGGATGGGAGGAGACTCGACGGGGCTGGACACCAGCG
CCAAGAGGAGCAACTTCTCGAGCGCCAGAGGTAATACTACCACTCAACTCATTCGACCAA
CTACCGTCCATGGTTTATTAGTACGTACTACCTTTTTCTCTCTCTGTTCTCGTTAGAGCC
TGATCTGACGAAATCGACTCACTCTTCACAGGGGATGACGGCCAGAAGTCGCTCGATGCA
GTGGTAAGCTGCCATGCTTGCTTTCCAAGGCTAAAATCATCTGTTTCGACAGCAAATTCT
TCTCCCTCTGACCACTAATTAACTTCCTCACACCTATACTCCCCAGGTTAAATCGGCAGG
CAAGGAGGCCATCCAGTGGGGTGAGCATTCATTTTAGCATCAGCTATAATTATTTTAGCT
CCATTTTTTTTAGCACAACTCGTACTAATATGTACTTGTTCGTCCGGCAGGATTGGCAGC
CGGGGTGTACTCCGGGATAACGTACGGCCTGAGAGAGGCCAGAGGGCACCATGACTGGGT
TGGTTTCTCGATCTCTACTTGTCTCTAGATATTTATCTACTTGCTGTTTCAGAATTAACT
AACTGGTCGGTGCTTGTTAACCGGATGATGATGATGCTGCTGCAGAAGAATAGCGCGATA
GCAGGGGCGATCGCCGGAGCAGCCGTCGCGCTGACAGGGGACAACGGGCACTCCGACCAC
GTCGTCCATTTCGCCATCACCGGAGCCGCACTGTCGAGCGCGGCGACCATGCTCTCAGGC
ATATTCTAAGCCATGGAGCGTGGGGCTAGGGCTAAAGAAATTCGGGGCAGCTCTTGAAAT
GTGTAGCGTTTCCCTTGATTTCTCCATGTACCTTCGACAGTTTGCGCACTCTGCCCCATC
TGCTAGCCAGCCCTGCAACTAAGCAAGTCCGAATCTCGTTAGAATTTCTCCATGTACCTT
GGATAATCTTGAAATGTGTTTTATCTATGGCACTTCAGAATGCTCAGGAGTTGGCCTCGA
ATTAATCCTCTATATGACCACATAGATGTGTAGATGAGGGTACATACAGTTGCTGGAGGA
GCAAATTGCTCAAAACAGCCACATTTGTGGCTAGAGTATTCTAAAACCACGGCTTTTGCC
AAAAATCACGAATCACCGCCATTTCTATAGCAAATGAGTAACATTTAAAATTAAAAAGTT
CAATCGCGCACAACAGCAAAAATAACGGGCGGGACCCGTCTGTTTGGGTTGATGTGGCAA
AGACTAGTGCTAGTACTTGTTGATGTGGATGGGGCCCCACTTGCCAGCCACACCTCTTAT
CTCCTCTGTCCTTTCCTTCTTCCTCCCCATACACTTAATTATCTCTACTCTTATCTCTAC
TTCTATAAAAATGGAGTTGGTGATGATGGTGTGCCTGCCTTTGGGTTATGTGTACGGTTC
GATCTGGAATTTGCGGTAGATTGAAACGGTTTAAGTTGAAACTAAGACATGTTGAGCGAA
CCACCAAAACACGGTTAGTCTAGAGGTTTCTCCTTCTCCGGCGAATCAGATTATTCTAGA
ACCCCGCCAAATTTCCTCGCCGTCGGCCCCTCACCTCTCTTTCTCCGTCAGCTCACCTCT
CTTTCTTGCGTGGTCATGGACCCGAGGCCGGCCTGAATCAGTTCGCAAGGTGTCGTGTAA
GAGCCTGAGGTCAGGGAATGCTTCGGAGAAGTGAGCAACCCCGGATGGCATTTGGCAAAA
GCTCTTGCATCAGGCGTTGTGCAAAACCTGAAGCTTTTTAGCGGCATTTCTCAAGAGCAC
GCAAACACAGCAACTCTATTGCCGTCCAGAGTCGTTGGCCTGCCTATTGTATCATCTTCA
TCATTGGCATATGCACGTAGTAGCAAATTATCATTGCAAAATGTTGTGGCTAGGCTACAG
TATTTGTCGTGTTAATTATGCATTCCTTACTTTCTGATACGGTGTCATGTCTTATTTTTC
TCTATGTTCATTGCTTCTATTGACTTTAGATCGTGCATATGTGGAGAAACGTCCGATTTT
GCAAGCCACATCCCGGATATTTGTTTCCATTGTTTGTTCTCAAACATTTTCTTTGCAGGA
ACCTGGTTTTTCCCTGGTTGATGTGAGAAAGTTACAAGTGGTCCAATACTAATGTTTTTG
TATGTACATATACATATGCACTCACCCCTTATATATATATATATATACATATACATATAT
ATACATATATAGGAAA
