Contig Data
morexGenes
Links



Map Locations of contig_1559001 (5385 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1559001

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10406 1 1183 bp AK359027 Available Available None





CDS Structure of MLOC_10406






Contig Sequence (5385 bp)

>contig_1559001 5385 assembly3_WGSMorex_rbca.fasta
CGGGGCCACAACAGGCCGGCAGCGGTGGGTGGCTGGGCCACATCAGGCCAACGACGGAGG
GGCGGCGAGGCCGCAGCAGGCCGGCAGCGCGAGGTCGTCGGAGCCGAGGCTGAGGCGGAG
GCACGGACTGAGCAGTTTTCTGAAACAACTGCCCAGTTTCAGAATCGCGGGCACGGTCGG
TTAGATGGAGTAAGATCCAACGAACGAGGAAGCGGTGGACAGTTTGTTCGGATCCATCGA
TGAAAGTTAAAGAGTTTTTCAAAAACTCTACCCCCTACATCTAGGAACCGAGGGAGTAAT
AAATATATCGAGTAGAATGGCTAGCTAGATGACCTATAGTACATCATCAATTGTTGGATA
AGAAATTGATCAATAATTCGATGAGGTTATGACTTACAGAGTCAAGACTTAGGACGGGCC
TTCCGATCCTCACTCGTATCCTCATGGCGTGACTAAAGATATTAGTCGTACACATGCTCA
ATGGAGAAACAATCCTAAATCTGGAAATCAAGACCATATTACAGTGTAGCCTTAGTGCAG
CACTATTTCATTATTCATGCATTGGTAGGAACAGGAGTAGTATAGTATAGAAAGTTACCT
ACGATTGGTGTGGTGCGGCAAACGAGGCGGAGATCGGCTAACAAGTTTTGCACAGCGTTG
CCCTGATCAAGTCCCGCTCGCGCAAGAGAGTCATGATGACGGACGACGCCAGCAGCCAGC
TTTCCAGGCGAGATCGTTTCTTCTTTCTCGTCAGCGTCGGCCTCATCGTCGCCGTCGTCG
AAGTCTGTGGCCGGGCTCCCTAGAGCCTACCGTCTCCGTCGCTCCGTTCACCTCCGGGCA
TGAAGTTCTATTGTTGACGCCGATCGGGAGTCGAGTCGACGCTGAGGTTGATTGGTTTTC
AAGGCGTCGCCAAGTGAATAGGGTGAATTCTGGATTAGGGCAGGGCGACGTTTTGCCTCT
CTATGGCTCGACGCACAACGGGGCGTGGGGCGGCTCTACGGACCGCGTGGTTAGCATTAT
CCGCGTATATGCTTGGCAAAAGTATCTCCATATATCGGACATCGGTGAGGCGATTGCGTT
TTCCACGGGTATATAAGCAACAGATCGCGTTTTCCACGGGTATATAAGCAACAGATCATC
ACAAGGCATATGCATCTCTGCACGCTGAGTGTATGCGGGTGTATACGTGCACTGCACAAA
GGTTAGAGGGATTATGTTATCCTCAGTGCTTGCATTTATTCCTGAATTTATTTCAGGATT
TCCAACGATGTGTATTTAATGAAAGAAAACATTTTTATCGATGACGAGGTGTCTATGATG
ACTTCGTAAGTTTTAAAATGATATGTCAGCCCAGTCTCTCGAGGGTGCTCATAAGGATAG
GATGTGTGTGTACGTTTACAGGGTTAAGTGTATGCGCAATGCATACCCACAAAGCTCAAA
AAACCCAGACGGCAGAGTTTTTTTTTCTTTCTAGAATATGCAAAAGCTTGCGTATCATGT
ACCGCGATGGCAGAGTAGTAGACTAAATTTCTGATATATATACACAGGAGGGGCAACACG
CTGCATGAAAGAAAGATACAACCAAGCTGAGTGTATTACTGTGGCTCGTCTAATTACTAT
TACAGCACAGGCACAAAAAAGGATTCGTATACAGCTGCTAGGCAATGCAACTCAATTAGC
AGTAAAAGAATTGAATTAGCTGGTTGACTATAGCAAGCTAGCAAATCTTCCTAGAACAAT
CTCGACGAAAAAAATATATGCAGGAGGAAGATAGATTTTGTACCAATACCGGAAGAGCAA
CAGAGCAACCTTTCTCTAATCTCGTAACTTTCTCTGTATGATGACTGGCCGACTAGATCT
ACACCGATCCCAGCTCGTAGGCACTAAGTTGCATGTACAGGTGAGTCCACACGGACCGAT
CCGCGTTGTTCAGTTCAGTGTGAATTGCCGTTCTGCTTGGTCGAGTCGGGTGACCCGTAC
CCGTAAGGGTTCTTGCTAGCCCAGTTCCACTGGTCCCTGCACATCTCCGTGATGCCATAC
TTTGCTCTGTACACAGAAGAACAACATTTAGTTACCAGAGGAATGTCGCCGCTGGCAAAA
ATTGTAGATAGTCTGTTAGTAGCTTACTTCCAGTTGAGTTCTCTCTCTGCTTTACCAGTT
CCTGCAAAGAGAATCTCCGCGTCACCAGGGCGGCGCTGACCGACGACCAGCGGGATTTTC
TAACAAAGGAAACACAGACATATGCATAAGAAAAGAAGGCACAAGAAGAAACCAACTCAT
ACAAATTTTCCTATCATTGGCATTTGGCAGGAGAGTTAAACGTCGTCTGGTCAAGCGTGG
CATGGTAACACTGCAAGATACAGTTAACTCTACTTGCAAATTCTAGCAATCGCCCATAAA
CTTTCTATGGGCAATTGTATGATGAATCGTAGAATTTTCACACATCTACTTGTAACCAGC
ACAAAGGGGCTTAGCATCATAACAGTCTGTTCACCCAAACAAGTACTAGCTACTCCATGT
TTGTGCTTTGTAATAAGAAAACTTCATCTTGGCAATAATTGAAGCAACTACACAATTCCT
GATCCTAACTTTCCTGTGCAATGCAATTGTCAGTTGTCAATTTGCAAAGACTCTCAGCTT
AAGCCTCTAAAGCCCTATGCAATCTGCTGAATAAATCCAAGGATTGCTTGGCATACTGTT
ACAGTTGAGCAGATTGTATCATAGAGTATATGCTAACCAGCAAAACATACCATGTAAAAA
GAAAATACATGCATACCTTTCCAGAAGCCTTCTCGAATGCATTTACTATCTCCAACACTG
ACGTCCCTTTTCCAGTTCCAAGGTTGTATGGTTCACATCCTGCATGATGAGTTGAATTTT
AGCAGGAGATCAAACTACATAGCAAACTGGTACATCGAGCATCCTGTGCATTTAGATGTA
GAAGAAATTGGAGTTTGAGCACTCAATACTTGCAGCATGGACTCCAAAGTGAAAGCATCA
AATAAAAATAAAATTATTTCTCTATGTTTAATGGCTAGGGGATTTGCAATGCACAAGAGT
TTAGCGGTTGAGTACTTAGTTGTTACATACATATGTATGGAAAATGATACTACCTCCTTT
CGAGTTTACAAGGCCCACGTGCATTTTGAGGACAACTTTGATAATCAATTTGATTAACAA
AATATTAATTATATGCCATAAAAATATATCCATGAATTCGTGTTCAAAAAAGATTCCAAT
GGTATAATTTTTAGGGCACACAACTCATATTATTGGTCGAATTGGTGGTCAAAATAAATC
TCAGAATGCATGCGGGCCTTGTAAACCTAAAAGGAGGGAGTAAAACGCATTCGTGATGAG
TGCAGTCAATTGTGCAAACCTATGTTAGACGAACTATCAAAAAGCTTCCGTAGTGCAGCA
ATATGCCCCTCAGCAAGATCAAGCACATGAATATAATCTCGTACCTGCACAAAAGGCAAA
AGTGTGTCCTTAGTAGATGAGAAAAACTTAACTGCAGGTTTCCTAACAATATTCACAAAA
TGATTCACTGGCATTCAGGCAATAGCACATCAAAAAAAATGCAGGACAAGACTTTTTTCA
AATGGCATTGCCTGTCTCAGATGTAGGATGTGGTTTTATTTGTTGTCCTCTTTGCTTATA
TTTTGTTGTAAGCCAGGCATTAGGAGTCTGATTTGCACTTTAATGTAAATTTTGATGGCA
TCAGAAGTACCCGGGATCCACATGATAACATGTTATTAGCATATCATCATGTGGTAGCAT
TGTGGATTTGTCTCCGGAGGAGAAACTGATGACATCAATGCATCATTCATTAAGTTGCTA
AGAAGATCGAACCAGATAGATATGTTTTACAGGTCTATACGTTGATGACTTGGGCAAACC
AATAGTAAAGATATACAAAACTCAGTTATTGAAAAAAAGATATACAAAGCTAACGAAAAG
TTCTAAGTTGCACAATGGAACAAAGTCTGAGGGCAACCATTTCTAGTTATATAACTTGTC
TCAAGTACTATGATTATTTTTCTTCAGTTATTTGTTTGCAAAAATACTACTATATCTTAG
TAAGAGCTACACAATTCCATTACTTGCTATGAAATTTTGTAACTAGGGGACCAACTTGAG
GAACTGTTGCTGCGACCACTCTTCTAGAGTTTGATCCATTCATATTTCAGAAAACACGTA
GAGGACTAGAAAAGAGCTACTGCACTGTGCACCAATGCACTCCTACTACATAATTACTAA
TGTTTAGTAGTTGATGGGACATGAACTGAATGAACCGAAATGGTTTCACCAAATTTAAAA
TTCCGCGGTGAAGTACTAGCTGACTGAGAATAGCATGTGAAAGAAAAATACCCCAGTCCC
ATCTTTAGTTGCATAGTTATTTCCAAAGATTGTCACTGACGGCCTCCTCCCAACAGCAAC
TTGCTGAACGAAGGGCATAAGGTTGTTTGGAACTCCACGTGGGTCTTCACCAAGGTATCC
ACTGGGGTGAGCCCCAACCGGGTTGAAATACCTAAGTAAAATGATCCTCCACTCAGAATC
TGACCGGTATATATCACGGCATATCTCCTCAGCCATAAGCTGCAATTAATGTGCATCACT
ACAATCAGTTAAAAGACTCAATGTAAAGATTGTGCGTAGGAAAAGAACTATAACATGCCT
TGGTTCTGCCATATGGATTGTGCGGAAGGAGAGGAAACTCCTCTGTGCAGGGTGAGTTCT
TAGGTGATCCATAAACTGCAGCTGATGATGAGAACACCAACTACAACATTTGAACACATA
AACATATGTCACTATCAGTCTGGTATGAACAAGAAAAATAACTGAATGAGCCTCAACAAA
CTGTCGATAGTTAACAGAATCATTAAGACAAATAAATTTTAACTACATATATCAAGAAAA
CCATGAATGTGCTAACCATATCTAGGAAATGCATGGATCAGTTGTTACAATTTATAGAAG
TTGGAGCTAGGGGCAGCTATAGGACGGCGGTTCGACCCGCATGTTGTATGGTGCTGAGTG
TTGACCGACTAAAAGGCGACATGCTCAACAGTTAGGTGTGGCGGAGATGCACATACTGAG
ATGTATGTGTGGCCACACAAGGAAGGACCGAGTCCGGGATGATGATATACGAGATAGTGT
TCGGGTAGCACTGATTGAAGAGAAGTTTGTCGAACATCGTCTGAGATGGTTTGGGCATAT
TCGGTGCAGGCCTCCAGAAGCTCTAGTGCATAGCGGACGGCTAAAGCGTGCTGATAATGT
CAAAAGAGGTCGGGGTAGACCGAAGAAGTCCGTAAAGAGAGACCTGAAGGACTGGAGTAT
CACCAAAGAACTAGCAATGGACAGGGGTGCGTGGAAGCTTGCTAT