Contig Data
morexGenes
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Map Locations of contig_1558911 (5639 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1558911

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10364 1 1900 bp MLOC_10364.1 Available Available LOC_Os06g37450.1, FRAME:-3, EVALUE:3e-105, 13106.m03878 protein GATA zinc finger domain containing protein, expressed





CDS Structure of MLOC_10364






Contig Sequence (5639 bp)

>contig_1558911 5639 assembly3_WGSMorex_rbca.fasta
GGCTTGGGACCGGCTATGCTGAGACAACATAGGCAGAGTGCCTGATTTTGTATCTCCGAA
AAAATTAGTGCCTCATCTTATAGCTCGCGAAAAAAGGGCTTTCTGACTTTGAAGAAACTG
GGCACACCCCAGTTTTATAAATGAAACCAATATCACATGAATACCATAGCAAGAGTACAC
ATGTGTGACCCGATGGTTAAAAGTGCGTCTCATAAACGCGCATGACGTTCCTGTCGATAA
CGAAGTGTTACTGTTGACTTCATTAGTTTTGCAACTTTGGAATTATAGACTCCCAATTTA
AAAGAGAGAGCATATATGAGCATCAACAATCAGATTACTAATAACAACAAAATGAATATT
CGCCACAAAATGTATGAAAATGCATGTCGATTCTTGCAGTAGTTAGTGAATTTAGCTATT
GTGTGCCTTCACAATGTATACACCATCATGGGCTATACCCGCCACGTCATTTGGTCGTCC
TGATCCTTGCCAGACGTGGAGACAGGCCTTGAGAAACAATCATTGTATTATTTCTTACAA
AGTATAAAAAATCACCATAGTGCAACTCTTAAGCTAGTTAACCCCAAAGCTTAGCATGCT
GCTCATTGTGGCCCTAATCCTTATCAATGAAATTAAAGCTTAGAGTTCGCTCGTCCATTT
GCCTTTCCTTGCCTTTGCTACAAACCTAACGTCCAAATAGTGATGATAGAACTTTTCTTT
ATGATTGTGACCTTTTAGCGCCTCTTGAAATGCAAAAATTGAAAATGTAGCGGTAGAAAG
AAAAACACAAGAATATAGTAACACTGAATCCTATGGAAACTTAAAATGCAAAAAGATGAT
ATGGAAGTTTATCTGGTCCCACTACCAGAAACTGAAGCGCATGAGTTTTGTATATGGAGG
TTGAGAAAGATTGACTGTATATATTATAGTTAACACAGACGCAAATGAAATTCTTGCTAC
AAATCCTACAGAATTGGGAAGTGAAAAAATTTGATGGTTGCATTGTTTGACACAAATGTC
TCAATGGAAAAAATATGAAGGACTGAAATTCTTTAAATTTTTTTGAACATGGATAACAAA
AGGAGCCAATACTTTCACTGAAAAGAAGCTCTTTCCTCCAAAGGGTGGGAAATGGCGGTG
CCCATGGATTTGTGATTTTTATATAGTGGATAGACTCTTCTCGCCTATTTTGGTTTGTAG
GGTTTTGTAGGAATCCTATAGGATAGGATTTTTGAAGGAAAAAATTCCTTGAAGCCCTTT
GGTTCGTATGAATTAATGAATTCATATTCATATGTAGGATAGGAATTAATTTTTCACATT
TCAAAGGAAGAAAATCACTGTCCTAGACTCAATGAAAACATTACTATCCTATGCATCAAA
TGGCATCTCTTCCCTTATAAGAACTGAGATACATGTCATCTCACTTTCTATGGTTTTCTT
ATTCCTATGATATTCAACATGTGAAGATTCTAGATAATGGTAGAGTATAAACTCTTCGGG
GATTTGCATTTAAGGGGCAGCCCAAATTATTATGAACATTCAACATGTGTGCACTGGTGA
CAAAAAACCCAAGGACATTGTAGACGATCTGTGTGTCGATATATTAAGGACGGATCTTGT
TAGATCTAACAATCAGCTTGGGTATGTTTGGTTGTTTGTGGGATATGAATTCACCGCAAA
CACACGCCTGATAGCATTTTCAGCGTAAACGTGATAACTATATGTTGCTACACAGGAAAA
CTTGGGTTTTGAGAATGTAGCTATATAGGTACAAAGTGAAAGAAACGCACATATTGTGGC
ATGTGTAACTTTTGTTTTGCAGATGAGGCATGTTTAACATTTGGCTTACTACTGACTTTA
TGATACCCCATCTAAGCTTTGAAATGTTTAATTTTAACAGAAACCCAAATTAAGATATAC
TAATCCAATATGACTCCTTTTTTTGGCGATGGAAAGTTATGGCTCCTTCACGTGCAAAGC
TACTAACATGATCCACAATTCAGCGTGTGCATCAAATTAATTAACTAAGCTTAGGACGCA
TATGATAAAGAGAATGTTTGCCTCAAAATCAGCGGGAAAAGGTTAGAAAGCACACTGTAG
GCGCTGACAAAAATTAAAGCAGATCATCACTGACATATAATCATCAGAAGCAAAAGTCAT
GAACGAATCCCAATTAACAGCAACATTTCATGGTCCGGTCTTTCGGTATTATTACGAGCC
ACAGTACAAATGATTGGAGCAAAACAAAGAACAAACATACATATGCTATATAGCAGCCAT
TGGCTTAGTTAGCCGCGCCAACAAAAAGCTAGCTACTCCAAACTGAACTCACACTCGATC
TCACAGTGTTTGCAGATCCTAGCTAGCTAGCTCTCACGTTGTTTTTTTATTTTTATCCTC
TTCTCTCCTCTGATCTCCTTGTTTCTACTCTCTTTCTCTAGATCTCTCTCTTTCTCACTG
TCTTAATCTTACACACAAACGAATCACAAGACTTTAACAGTAGCGCAGGGTTACACTAGC
AACAAGAACAACAAGCCAAAAACGCGGCGCAGCACGGACAGTACGTACTGACTGTCTAAC
GGTCTAAGGCAAAAAAGCCCAGGGGTGTACCGTGGTAGATAGATCAGAGTCTCTCGAGTG
TTCCATCATGGATCGATCAGCTCCGGACAAGCTCGCAGGATAGCGTCATCAGCAGCATGG
CGGCGTCCGTGATCTCGTCTTGCACCGGCACTGACACCGCGAAGGGCGCCGGCGGTGGCC
GGAAGCAGGAGGCTGTGGCGGCAGTAGGGCTCTTGCTCCAGTTGGCCCCGATGGTGTCGA
CGAGATCCCTCGCCGGCGCAGCATCAGTGGTGGTGGTGGTGGTGGTGACGACGATCGGTG
GCTCTGCGGCAGCCTCGACGGTGGTGGAAGCAGCGGAGTTTGTGGCGGTGTGATCCTGGA
CCACCTTGCACCGTTTCTTGAACGGCAGGGACCGGTCAACGTCGGCAGCTCTCTTCTCCT
TCTTCACCTTCGGTGGGTGCACGGTCACGGCGGCTTCACCCGCCGCGGCGGCCTTGGCTG
CACCAACATCGGTGGCGGGCGCCGCCCCGGTGGCCATCATCGCCCGGCGCGCCTTCCGCT
GCCTGATGCCGCATGCGTTGCAAAGCGACTGCACCATGCAAACCGAAGCGGAGTTAGTTA
CCGTTACGCCATTAATTAACTAACTTGTGCCCCTACCAAGTGACCACGGAATTAACAAAA
CAAATCGTAATACCTTGGGGCCACAAGGACCACTCCTCCACAAGGGGGTCTTGGTGGTGT
TGCAATCAGAGCATGTCCTAATAACACCCAGAGCTTGGTTCATGCCGCCCATGTGGCCAT
GATCCTCGTATGCCTGCGCCCTCTTCCTCGGCTTCTTGACACCAGGATCGCTCGTCTTCC
TCGTGATCCTCATCTTGGCTGCGGGAGCAGGCGCCGTCCACTTGCCGATCTTGAGCGATC
CGCTGGTGGCCTGCAGCTTCTCCATATCATATGGATCGTACGAGTAGGATCGCTCGATCA
TGTCGTCGCGGATGCTCTCGACGGTCGGGAACGGCGTCGAAAACACACTCGATGATCCAC
CGATCATCTGATGCGCATAACAAATCAAAGGATCGTGTTAATTGAGCAACTAGCTAGCTT
GCTAGAAAGTGAGCTAGCAAATTAATTCAAATAGCTAGGACTAAGAAGAAATCACTCCAA
TCGATCTTACATGTTGGGGCTGATCTAGCATGACATGGTGCTGCATCAAGTGCTGGTCCG
ATCCGTAGCTGAGAGTACTGCTGTTCTCGCTAGGGCTGCTGTTGCTGATCACAAAAGGGA
ACAAGATCGGGGGATCCTTGGGCAGGGTGAAGGCCTGGAAGTGTCCCTGATGGTGATCCT
GGTGATGATGATCTTCCTCCATTAGAGGGAAAGCAGTAGAGAGCTGGCTCATGTAGATGG
TAGACATGATGAGATCTAGAGAAGATCTAGCTAGCTAGGCAGCGCAGATAAACGGAGATC
CAGGATGAGATGGGGAGGGGAGGAGCTATAACTAGCTAGCACTGTGATGTGCAGTTTGCA
GAGAGCCGATCGAGAGAGATCATGGACAGGAGGGGGAGGCAGGCCCCTTTTATAAAGGAA
CCGAGAGAGAGAGGGGGGTCTAGGCCCTGTGTGATCACTTTCACAGAGAGGCCGGTAGCT
AGAGAGAGGGAGGAGAGCACAGGAAAGGGATGAGCTAGATCGGCGGGGAACAGTAAAACA
CGTCGGGCGCTGTGCAAACACACGTTAGAATTCCTAGGGCCCGACAAGCATCAGGGTCTC
TCTCTAGGGATGTCGTGACGCGTGATCTGTGTGCGTATGATCCTATGTGGCAATCATTTC
GTACGTCTACTGTAGCGTGCCCTCGAATTAGGGCAAGGGATATTTCGCTGTAGCACACAA
ATGACCTCTAGCTAGTACGTACGTTTGGCCTGGCTAATCCTAGTATAACGGAGCTAATTA
TAGCTCATGCTCGTCCTTTTTGTGCTTGAACGACCAATCAGATTTTGCATACTGTACTTA
TAGCTCATCAAGCTTTCGTTTCAGCGCGTAATTAGGTCTTCTTAGATCTATTCGGTTGTT
AGGATGTGATAGATGGTGCCGCAATGATCTCCTAAATTCCCTTACTGACATGCACATATG
CCACCACACGTACACACATGCACCCGTGGTTCGTCTATCATCACAACTCTAGGGTTGCAA
AGGTTAGGAAGGCATTCCGTGACCTCAAGAAGCACAAGCATGTTCATCCTACGGAGGAGA
TGTACTCGATCATTGAGAGGTGTGGGAATTAATCAAGTTATGCCTATTGGGTGGAGTTAC
GGAAGGTTCCAATTTAGTTCCTGGTTGTCGTCATCAAACCATATTTTGAATGGTTATCGT
TGGAGAGTGAAATTTTAAACATTATCAGGTTTCCGGATTTGAATTCATTCGATGGGTAAC
TAAACAATTGACATCTCAAGATGATTTACGAGATTGTAGTATTTCAAAACGATCTTTGGT
GAATGCATGCAGTCCAAACGTGTTCATATCAATATGTGGTTTAGTTAATTAAAAAACCCT
AAAAAGGTTAATGAAATCAAGAAGTAGATGAAAATCCACTTAGGTTTCAAAATAACGAAA
TAGAAACACCATCCCCTTTAAAGTAACCTTGGTGTGGGCCAGTATTACTGGGGAAAATAG
AACTAGGGCCATTTCCACATTTCGCATTTAAAAAACATATCACACTAGTGTCACAAAATC
TTACGCCGCACCGTTACTTAAAATTGTACGTCCTGCATTAAAGAAACTATAGCCCATAGA
ACTGAAGTACGATCTGCAATTTTTTGGCACAAAAACGATGCTCAATTATTTTGAAATGTG
TATTCAAGTTCTAAAAATACCGGCATGCTATATGTCAATTTCCATAAACTTATGTATCAT
ATTAAGTCATTAGTTAAGGGCTAGCTTTTTTGGAGCACATTTGCTGAGTAAATAGGCAAT
TTTTCGACTAATTTAATCCATAAATAGATGACTAGCATGGCATTGACAGAATTAAGCACA
TACTGATATTGATCTAAACAGGCACGTACTACACAAACAGTAGACAAATCTACACATGA