Contig Data
morexGenes
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Map Locations of contig_1558815 (3349 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1558815

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10320 1 1670 bp None Available Available None
MLOC_10321 4 1772 bp AK249958.1 Not available Available None





CDS Structure of MLOC_10320






CDS Structure of MLOC_10321






Contig Sequence (3349 bp)

>contig_1558815 3349 assembly3_WGSMorex_rbca.fasta
AAAACTTTTTGAATTTCAAGCATTGGAGAGAATCCTTACGTCTATTTTTAGGTGCATGTG
CATGCGAGACGCTGTTGAATCCATCTTTTTAATAACCCGCGATAGCGACATGCATGCATA
ATCATAAATAGTGTTTTCTTGTTTAGACGGCTACTCCCGCATGCATGCATGCATGCATGC
ATGCAGTTCTCACGCATGGATGGTGGGCTTCCTAACGTGCTGCGCCGCTACGTAGTCTAG
TCCATGATTCAAAAATTTCAAGCGTGTATGTTATGTCATAATGTCCATTCATGATATATT
TTTTCTGTACTTTTTCACAACATTTTGGATTGGAAAACACACATGTGAAATATAGGGTGC
GACCCTACACAGGCAGAATTTTCAAACACAAGTACTCATGCAGTGATAAGATTTGAAAGC
TTAGGAGAACATATTGGATACCTTCAGAATTTATATCAACTAGAATTAGGTATACCTTAC
AAATAGCAGCATTTGACTCTTTCTCATTTTTGGCATCTATATTTCCACTTGCACCATCAT
GCGAGGAGTTTTGTGCTTGATCTGTGTCTTTACCATCATGGTCACTTTTTATGCCACTAA
TGTCTTGTCGTTTATGATGGTGATGATGGTGCCCATGACCTGAGCTATGACCCCCCTTTT
GAGAATTGTCCTCAATATACCTCACAATCTTTTCGACGATAAAGAACATTACAATGCCAA
CTGCAGGAAATGGTTGGATGTTAATATTGCACAGCAGCATGAAAAAAGAGAAGAGGAGTG
ATAAAAATGATTTACAATTTCTTCATTGTACTAACATATGTTCAGGCAACAATGATTAAT
TCCTAAGAAAATTGAGCATATCACATAAGCATGTCAACATTGATTATCCTGGAAACAAAA
TTCCAACTTCGATAAATAATTGGTAGGCCTTTTGGCATGTTAACTGTAAGGGAAAACACT
GTTTGATATAGGTATATGAGGTAATACTCACATAAAATAGACAAGCCAACAGAAAGATCT
TTCAGGGAGTGTGCATGTGAATGCTCCTGAGCATGATCATGGTCCTCATGATTATGTGAA
TGAGAGTGCCCTCCACCTGTGTACCCAAAGAAACATAAAATGATGAAGAAATAAGAGTAC
AGATAAAACAGATTAGCACCACAAATGGTGTAAGAGTACTGCATGTACAAAGGTCAGTAA
CGTAGCAAAAAAAAGGTTAAAAGAAAAATCATTTCTTAGGGCATGTCTGAAATACTAGAA
CTTCCCTGGGTTCAGAAATGCCCTTATAACATTCAAGGTTCCTAACAAGACCGTTGCTAG
AGTTTTTGTCCAAACTTTAATATCAGCATGACAAACAAATAATGCTATTATATGTTAGCT
GGAGTGCTGGACTGCTGGACAGCAGTATTTTAGTTCCGTATAAGCTCTTAACAATCAGGT
GAAAGGGTTAAAAATGTTAATCATGTCCTAGATCCTACAAATAGAAGATATTGTTATCAA
GTAGATGGTTCAATTTTAGTCTCCTAACAGAGTACATGCAGTGGATAATTTGTTTGCGAG
CTACTGTGCTTCTATTTGGCATATAAACAAAATATCTTAAAAAACTGGGCAGCAAATTAC
ACTATAGCAAGCAGACCATTTATCAACATTGCACAATGTTTCCCTCCAACAGACCCTTTG
CATTGCACAATGTTTCCCTCCAACAGACCCTTTGCATACGCCCATCTGCTATACCCCATG
ATACCTCCTGAAAAACTGATAGGGAGGCTGACATGCAGCTGCAGTTATCATGGAAACAAT
ATGCTAAGTTACCTCAGTAGAGTTTTTGAGCTCTCTTTTGGGCCTTTTCTTATCCCTTTG
CTTTTTTGTTTTACGCTAGGTTGCCCTTTTGCTTTAGTTTTTGTTCTGGTTTGAGTTCGT
TTTTGTAAACCCGCGTTGCGTGTATGAGAAAAAAATGCTAAGTTGCTAACTGATGGCAAT
TGATGTTGATAATGAGTAGATCAACTGTTAGTGCACACACAAATTCTGACTTTCTGAAAT
GAAGAACAATGAAGACATGAAACAAAAACATAAGCACAAAAGACATAGAATGCATCCATA
CCAAAAGCATGAGGTAGTTGATGAAGAAATGAATCTCCAAGCATTGCACCTGCCTACATA
ACATCATAAACGAAACGACAAAAATTCTGCTACTGGCTATTCAACAGCAGCTCAGTAACG
AACCGAGAAAATAATAAAAGAAAACAAATACATGATACAAAAAACCAAAAAATAATAATA
ATTGCAATGCATAATGTCATCTCAGATTCTTTTTCAGATTACATTTTGTCGAGGGGAAGT
AGTTTTACTGTATTCCCGTGCCACACATACTACATTGTGGGTCGTATTCTATGGTCGTAT
TTGCTCGTACGTGTGTGGTTCGAGGGGGCCATTCCTGACTGGCCGGTTCCCTTAGATGTG
CCAACCCAAGTTTCCTTAAAGGAACCGTGTGACTACCAAAGGAGTCCAAGGCTTGTACGG
CAAGGTCAAGATGGAGACCCCTATATAAGGGCATCCCCGCAAGATGATTGGGGACTTCTT
CAGCCACTTCAAAAACCCTGGAATAACGAAATAGGGCTTTAGTAGATCCGATCTTGGCAT
TCTGCCTAGATCGTCCTCTTGCCCGAGTCCGACCCAGCCCATTTTTTTTTGGGCCAGGCT
GCCCATGCCCAGGTTTACAACAAAGACTTTTGTGACTCTGGCTCAAAGGGGACTCCTGTT
GAGGGAATAACCAAAATTATGCATGGGGTCCCACCCAAGCCTTAGATGGCAATCCACATG
GATGATCAAAAAAGGTAAAAGGTAGTCAACATAAGTCAAGGAGGTCAATAGAAGTCCTAA
CAAGCTACATTTTTTCCAAGCGAGCCGCCCCGGTCAACAAAAGTCCAAGCAAGTCTTCAT
GGCGAACAAGTCAAAGGAAGAAGAGCACATGAAAGAAAAGGTCAAAGATGGATGCAAAGG
AGCAAAGAAGCCCAAGCCCAAGGAGAAAAGGCCTTCATATGGTGGAGGGAATCCCTCTTT
CATGGGACACTACTTCCCTCCTAGCTCAACTAGGAGCCCATGGACTCATGGACCAAAGAT
TACCTAGTTCTACCCTCCCATCCCCTCTTTTCAAGGTTAGCTTTGGTCCTTTTCCAAGGA
CCCCTAGGCTATATAACGCCACCCATGGGCATGTAACTTGTTCACTCCCACTTGAATAAA
CTCAAAAGGGGAGTCACTCTCCCCTCTCCCTAAGGCCTCGTTTGGTTAAGGNNNNNNNNN
GAGGTTTTGAGAGGGAGGGATTTTAGGGGATTGGGTGAATCCCTTTGTT