Contig Data
morexGenes
Links



Map Locations of contig_1558810 (4120 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1558810

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10318 1 163 bp None Available Available None
MLOC_10317 2 994 bp MLOC_10317.1 Available Available LOC_Os03g51510.3, FRAME:+1, EVALUE:1e-55, 13103.m05604 protein ribosomal protein L6, putative, expressed





CDS Structure of MLOC_10318






CDS Structure of MLOC_10317






Contig Sequence (4120 bp)

>contig_1558810 4120 assembly3_WGSMorex_rbca.fasta
GACCGGGCTTTGCCGGCGGGCTCCTCAGGCGGCGGCAAGGTGAGGGGGACGGTGGGGTGG
GGGCGGTGGCGGCGCCGGAGTGGCTCCCCCGTGTCGCCAGGAAAGACACATTTTTATGTC
TACATGTTTCCTACATATTTTGTATACATCCGCAACATTTCTTATAGTATGTATGTTTCC
ATCAGCACACATGAGTGGACGTTCGAATTTGAAAAAATCCCATGTGCAAAACACGCATGG
GCCGGGCGTGCCAACTAGACCATTATAAGCCTAGAGCGGTCCAGCCCACTTAAGAACGTG
CCCTCTTCTTCTGCGGCTTCGCCTCTGTCCCCGAGCGACGGCGTAGGCACACCGGCACCT
CGGACGCCAACTCATTGGCACCTCGGCGCCGAACACGCCCCTCAGCTTTCCAAAGGTACT
ACTTTTCTCTCACACTCCTCCTCTGCTCTACTGGATTACCGTGAAAATGAAATAGAGATC
TGTTATGACTTATGAGTTCGATTGATTTCCATTTTTCTGATGCTGGTGGCGAACCCTACC
GTGCTTGGATTTCGTTGCCCAACTTAGGCCTGCCCTGATCATTCTCCGATGTCTGCTTCT
TGATTGGAGTTTTGGGTTTATCCAGAGTTAAACTTGGTTTAGTGTGACCACGTCCACAGA
AGAATGTATTACAATTTCGAACACCAAATTAGTCTCATATAAGATTCTTTACGAAATATA
TTTTCATACTGTGTGTATTTGGTATTATAAATCTAGGTTCATTTTTAAGAAAGTTGGTCA
AACTTTAACAAGTTGGACTTAGGAAAAATCTAGAACTTTAATTATTTTGGAACTGAGAGA
GTGGTACTTAAGAAACTTGTCTTGTTCGAGAGTATGGGATGGTTTTATTGATTTGCTTTT
CTCATTTTGTTGTTTGCTAGAAAATAATTGATCAAGTGTGATCTTGTCTTGTATACTTAT
TGTTATAAATTAATAAAAAAAATAACACGCTACAGGAAATAACGTCGTTCCTGGAAATAT
GCTATTAACGTGTTATAGCGTGCTATTAACGAGACATTATACGCTGATCAATTTTGCGAG
ACAATTCTCTACACGATATAGCGTGCTATTAGCTGTGCTATATTGCGCTAATTATTTCAG
GGAATACAATATTCATCTTGTGTTTCCACCTTGATAATGGCAGTGTTTGTGTATTGTCCA
GTTGAATGTCCACCGTTCTGATGAAAAAACCCTACTCCCATTTTCCTTCTGAAGGTAACT
AAGCACCAAGTACTTTACCGCAGGGCGAACCATTTCCTCCAGCCTGCAAATGGAATCAAA
GTTTTTCCGATTTCTAAAGCTCGTTGGAGTTGGCTTCAAAGCAAGGACAGAGTGTGAAGG
CCGGGAGCTGTTCCTGAAGCTGGGCTACAGCCATGAGGTGCAGTTCACCGCTCCACCCGC
TGTCCGCGTCTTCTGCTTCAAGCCCAACATTGTGTGCTGCACCGGCTTGGACAAGGACAG
AGTGCACCACTTCGCCGGCGCCGGCCGAAACTGCAAACCGCCGGAGGTGTACAAGGGTAA
GGGTATATTGTACATCAATGAAGTGATGAAGCGCAAGTGATGAATGGAACACAATAATCC
CCTTTTCCGTTTCTCTGGAGTTCTGATTTTGCTGTGTTGAAATTCCTATCATGTTGCTTC
AGTAGCGGCGCAGAACTGCTGATGTTGATGGGGTTTGCTTGTGCTAAGGCAATTCATATA
TAATTTGTCCGCTGTTACCACACTGGAGGCTTTACATTTCCATCCACATAATGAAAGCGC
CGGATTCAGCTTTTTCAACTTTTACTATGCTACCTTCTAACTTCTGGGTTAATATCAATA
AAAAGTTGACGTGTTATACAAAATAACGTCATTTATGAGAATATGCTATAGCAGACTATT
AGCGTACGATAGCATGCTATGATGTGCTATTAACGAGACGTTGTATCTTGATTAATTTAA
CAAGACAATTCTCTACAAGCTGTTACGTGTTATTTTTTTTCAATGCTTAATATCAGTTCA
GATTTCAGTAACTTGAAACATGAGTTTTTTGCGGAAATTTATCATTCTGCATGTTGCCAT
TATCTGTTGGGTTTTGGATTATCATGTTTACCAATCATGACCAGTTTAATAACCTATCTT
AATATAGGCTACATTTCCATAACTTCTTGTTTTTACCGCGCCACTTGTTACCGCAGCACG
GGCGTTCGGCTGCCGCGAGCTGCGCTGTACCAAATTGTGAACCCACCGCCGGTTCAAATT
TTCAATTTACAACAATAGTCTCCGGTTTCTAACTGCGGTACTACTGTCACAAATCATATT
ACAATCTAACTAAGTTTGGAATAAATCAAAACTAAAACAGGGCAGCCACATACATTCACC
ATATTCCTGGAAATCTCTGCTCGCCGGGAAATTCCGTCCTTGCTTTACATAGTTTTAGTA
TATTTGTTGGGGCGGCGAGGTGGTGGCGGAGGCTGAAAGTTAGAATAATGTCTTCCTCGT
TGTATCTCTGTCCTGAATGTGTGGCTAGCGCTGATAAAAAGGTGCATGAAGATATGTCTC
TCATGAATGTTCATCAATCCGATCGACGTTGGTCTTCAGGTGGATCTACTTGGATCCGAT
CGGCACTCGCTCCGACAATCAATGAGGATTCAACCAACCCTCGTTTCATTGACGTGTTTA
CATATATAGACTTTCTGATCTACGTCTCTCATCATCGATGTTGGTTCTTTTTTCAGGTGC
GCTCGTCCTTAGGGGGCTTAGCACAACAACTTCTTGTTTTTCTACCGCAAAACGTTTTTT
CTGGCCCTCATGAGAAGAAGCAATGACAAGTTGTGTCTCCGGCTAGCTCAAATGCTTGTA
GTTATTGCTAGGTGGTACATGTACCTATTTATAATTTGTGCTAACTCTGGACATCTTTGT
ATCTCTGTAGCATTCATGGATGCATACAACATTTTCTATGCAATCATCTTATGGTGAATG
TATGCTTTTTCTAAAGTCTTTCAATCTTTTGTGAAAAGAGAAACCTTCACTAACGTGCTG
CTGCCCCATGCGACACCGGGAGCCCCGAAACCGTAGCCACCAAGACCAATCCCAGAAGAC
TCACTGCTACGGCCGACGATGGCCGCGAAGGCCTATGTCTTTCACCTAGTTTCGCAACTG
TCCCTCAATCCAAGATCCCCAACCCTGTTCAACACCCCATTCTCCCCCACTCTGCTTCAC
CTCCAAGGATCAATCATGGGTAGCATCACTTAACCCCCGGCCACACCGCATCGCCGAGCC
GCAGGGGATGTCTGCTTTCAACGGAGCTCGTGCGTTGCGGGATATATATGGAGCGCGAGT
TCACTTTCTCCTGGTCCAGAGTCGAAGCTGCCCGGTCTACTCCCCGTTGCGGCGCCGTGG
TGCATGCTCCACGCCTGCGCTCATCGTGGATAATGTGCATGTGGTTCACGCTGGTACCCG
GGCTCATGGCCTCCCCAACATCCCTTCCATCAACACCCGACCACAGCATCCCACCTCGAA
CCTCCCCGCATGGTCCCATTGTTGGGTCCCAACATTGTCTTGCATCCGCCCATCCCTTTC
GCCCCTTTTTTCACACAGTACACACGTAAGCGCTCATATACACGCGCATACATTCACCCT
ATGAACGCACACACGCACATCCTATGCATATGAGCACCTTGGAAATACTGAGCCGGTGTA
TCATCTTGAAATTTACGAAGTCATTGTAGGCACCCCGTCATCGACGGGAACGTCTCCTCC
TACTGAATGTGCATCGCCGAAAATCCTGAAATAAATACAGGAATAAATGCGAGCACCAGG
ATTTAAACCCTAATGGGCCGGGGATCCCACAATCCCTCTAACCATCCAACCACAGGTTGG
TTCGCCCCATCTTGGCCTGTTAACTTAAGAGCATCTCTAGCAGACCCGTACAATCGCCGA
AACTTTAAAATTCCAGCGATTATATGGATTTGGGCCATTTTAACTGTCAGAATAGACACC
GTAAACGAGGCCCGGCCCGTAAATATTTTGCGGTGGTGTAACGCCCAAGATGCGANNNNN
NNNNNNATTTGGCATGAGGGCCTCGTCACGGATAGAAGCG