Contig Data
morexGenes
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Map Locations of contig_1558560 (4493 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1558560

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10176 1 1382 bp MLOC_10176.1 Available Available LOC_Os03g41438.1, FRAME:+3, EVALUE:9e-165, 13103.m04460 protein serpin domain containing protein, putative, expressed





CDS Structure of MLOC_10176






Contig Sequence (4493 bp)

>contig_1558560 4493 assembly3_WGSMorex_rbca.fasta
GAGCATTCATTGTCATATTGCTTTCCATGATCGTAAGATAGCTAGCATGGTATTTCCATG
ACTTGTCCGTTTTTTATGTCCGTGTTACGCTAGATCATTGCACATCCCGGTACACTATCA
GAGACATTCATATAAAGTCATACTTTGTTCTAGGTATCGATTTGTAATATTGAGTTGTAA
GTAAATATAAGTATGATGATGAGCTAATTCTAGTAGTTTGAAAAGCAAAATTAAAGTCAT
AAACTCGATTTGTAATATGAGCGGCTAGAGAATTTGGAACCTGCTCCCCTTTGGAACATA
AGAACATCTATAACCGGATCCCTTAAATGACTCCTTATATATTCATAGACGCGTCGGATG
AGTGACCGGACAGGAGAAAGAAAAAAATTAACCCCATCAGACCCCTCATATTATTTTTAT
ATGCTCGGGCTGTCCGCAAACCCTCATATGCATCTCAAATATGGAGAGTATATGAGGGCT
CGCGGACAGACACGGACACGCCCCGGCCAGTTCGCCACATAGGACGCGGCCCCACCACGG
ACCACATTTTTTTCTTTATTTATTCTTTACTTTCTCTCTATTTCTCTCCATCAATCTTTC
TTTCTCTTCATCAATCACGTGCAAGTGACCTGACATATGGGGAAGAAAATGACGAGTGTG
CATTCACGTACGGACAAATAAGGGACACGTCCGGTCACTGACCGGACGCGTTCGCAGGTG
TTTAAGGGTCTGGATTTGCAAGTCGTGGCTGAAGATACTCTGAGAGCATCTACAACCGGA
CCCCTCAAATGACCTCTCATACGTCCGCGGATGCGCCCGGGCTATCCGCCACATAGGACG
CGACCTCATACCAGACCTCCTTTTTCTTTTCTTCATTCGTTCTTTTTCTTCCTCTCATTC
TTTTCAGCAATCATGTGCAAGTGACCGGATATATGAGGAAAAAAAAGAAATGTGGTTCTG
CAGACGGACAAATAGATGACACACCCTGTCACTAGTTAAAACTTTACACGTTTGCATCGT
AATCTCAGTTGTGTGATCTTAAGAAAGCATCATGCTTTCAAAGCAAAAGCATCTAAAAGG
CCATGAGACGTGTAGTAATCTTCGTATAATCCGATGTTCTACGAAATTCGGATACGAGGG
TAGACCAAAGGACGCGGTCGTGACTAGTTAAACGGCGCTAAAAAGCAGTTTATCTCCCTT
TATGATGCAATCAAGCCTATCTCAAACTACTTTAACGGGTTTTTGTTGGCTACCAAAGTA
CCAAAGTGCATATGGTTCCAAAATCAAAACCAAAACTAAACCCCGTTTCACATTTCAGGC
CACGCGCGTTAAAAACCCGCGAAAATAGCATTTTCCAGTCAGCCCTCTTTCCCTCAACTC
TGACCACAGCCCAACGAACCACCACACCAGCCATGGCAACCACCCTCGCCACCGACGTCC
GTCTCTCCATCGCACACCAGACCCGCTTCGCCCTCCGCCTCGCTTCCGCCATCTCCTCCA
ACCCCGAGCGTGCTGCCGGCAATGTCGCCTTCTCTCCGCTCTCCCTGCACGTCGCACTCA
GTCTCATCACCGCTGGCGCGGGCGGCGCCACCCGTGACCAGCTCGTCGCCATACTCGGAG
ATGGGGGTGCAGGTGACGCCAAGGAACTGAACGCGCTCGCGGAGCAGGTGGTGCAATTTG
TGCTCGCCAATGAGTCCAGCACCGGTGGCCCGCGCATCGCCTTCGCCAACGGCATCTTTG
TCGATGCGTCGCTCTCGCTCAAGCCTTCCTTCGAGGAGCTCGCTGTGTGCCAGTACAAGG
CCAAGACACAGTCCGTGGATTTCCAGCATAAGGTGACCCCCTTTCCTTGGGCAGCTTGTT
TGTTGAAACAACGTCAGCTATTTCTCTGAAAAAAGAGAGTACACGATTTCCTCACTAAAA
CATTAGTATGTTTTCTTGCACTTTCAGCTTCAGTATTACATCATGTTCTTTCAAATTATT
TTTGAAAGTTGTTTGATTGTCAAAAGTTCGGTGGCACATCATGATCTACTGCTTAGCATT
TTCCAGTTGTCCTAAATTATGTATTGTCATTTTTCTTAGTTTTGGTCATGCTAGAAACTA
CAACTATATTACGTATTGTAATTTCTCCATTTGTCCTAATGCTGATGTATTGTTCCTTGG
TCTAGACTCTAGAAGCTGTTGGTCAAGTGAACTCATGGGTAGAGCAAGTCACCACAGGTC
TCATCAAACAGATCCTTCCTCCAGGATCTGTTGACAATACTACAAAACTGGTCCTTGGTA
ATGCTCTTTATTTCAAAGGGGCCTGGGATCAAAAGTTTGATGAATCAAATACAAAATGTG
ACAGTTTCCACCTTCTTGACGGGAGCTCAATTCAAACACAATTCATGTCCAGTACAAAGA
AGCAATACATTTCCTCTTCCGACAACTTGAAGGTACTTAAGCTTCCTTACGCGAAGGGTC
ATGACAAGAGGCAGTTTTCCATGTACATTCTTCTTCCTGGAGCACAAGATGGTCTCTGGA
GTTTGGCCAAGCGGTTGAGCACTGAACCGGAGTTCATCGAGAACCATATCCCAAAGCAGA
CGGTTGAAGTTGGTCGGTTCCAGCTCCCCAAGTTCAAGATATCATATCAATTTGAAGCAT
CTAGCTTGCTCAGAGCTTTGGGTCTCCAATTGCCATTTAGCGAAGAGGCTGATCTGTCAG
AGATGGTGGATTCTTCGCAAGGGCTGGAAATCTCACATGTCTTCCACAAGTCGTTTGTCG
AAGTGAACGAAGAAGGAACTGAGGCTGGCGCAGCTACAGTTGCAATGGGCGTGGCCATGT
CAATGCCCCTGAAGGTGGATTTGGTGGATTTTGTCGCGAATCACCCTTTCCTCTTCCTTA
TTCGGGAAGACATTGCCGGTGTGGTGGTCTTCGTAGGTCATGTGACCAATCCCCTCATAT
CTGCATAATGTGCTTGCTATGAATCTGCTGTCCTGGGAGTGACCTCTTCTATATCATTTA
GAGTAAAACATGTAATAAGTGGATGGTTTCAACATCTGACCATGATGCCCATGTAATAAA
TACAATAAATGCTCATGTTCCTTTTATAATAGCATGCTTTTTGTGAGATGTGTATAGAAG
GACCGGAAATTGCCTTTGGCTCCCGAGCTCCATGGAGGCCTTTAAATTCAAACTCTAAAT
TTCGTGAAATTTCACATTTTAATATTTCAAAAAAATCTGAAAAAAATACATAGATAGATG
AAGGTATAATACATAAGTGTGTAAATTTTCAGAACAAAATACGTTGAAATGAGGGCCGTG
CAAACAAGACAAATCTGAAACCTTTTAACACATGTTACTATTCATATTTCAGACCATGAA
TTTGTCTTTTTTGTACAGACCGCGTTTCAAAGTATTTCGACCTGAAATTTGACACGCACA
CGGATCATATCCTTATTTAGTTGTATTTTTTTTCAGATTTTTTGGAACTAAATTTTTTTA
ATTTTGATTTTTTTCAAAAATTTCGGCCTCCATGGCTCCCGGGAGCCAAACATCCGTTCT
CTAAACAATGATCTAGAATTGGTATTGAGCATTTATTTTCTTTTTAAGTTGTTTGTGAGC
TTTAACCACATATAAAAGAGATCCATGCTATATCATTTTTGCCTGCTTCATGTATGCTCC
TCAATATTGTGTGTTTATTGTTGGTAACAGGATATTCCGGTGATCTTTCAAAACAAGTGA
AGCATGGGGAGTCGTGTGGTAGCTAAGCAAGTATGGTGAACCAGATGGGGTTGGGAGGTA
TAGGCCGAATGGGGGCCAATAAACTTGGGTGATGCTACATATTTTTTTTGTGCCACCAAA
AAATACACACTTTTCCTTGTAATATGGAGTGTAGGGCACTGGCAACTAAGAATAACAAGG
TCAAAGGGGATTTGGTTGTGATGGACCAATGCGATATTTGTGTCTTGGAGGCACAAGATG
AATTTCACGCAGTTGTTACAAATCATAGGAAGAGCCATTTGCGAGGACTAGGCCGATCCA
TAATGGTTTCTATCCATGTTAAGAACGAAAGTGGCTCCTCTGTCGTGCCCTGTGTGTCGT
TGGGCCACTGACATGTCGGCCAGATTTCCAACAGGCCCACATGCCAGTGATAGAACGATA
GTGCGCCGAACGACACATGATCCTCATGCGTTAAGAACATGCGACGACGAGGAGCAGCAA
ATGTGTTGCTGCTATTTTGGATGTTCTGGCATGTTCACAATAAAATGATTCATGAGGATA
TCCCATCGATGGAGTCAATTGGTTTGGTTCATGCAAAGTGTCACTAACTTCGTCCAACTA
GCTACAAGACTTGTTTTTAAATTGATGATTCTTAGGGCATATCCAACACTCATCCTCAAA
CTTGAAAGTGCTTTATATCGACTAGAGGGGGTGAATANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNACTAACTTACAGCGGACACAGTAAAGGATCAG