| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1558520
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_10155 |
3 |
2269 bp |
MLOC_10155.1 |
Available |
Available |
LOC_Os01g05840.2, FRAME:-2, EVALUE:5e-166, 13101.m00569 protein oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed |
CDS Structure of MLOC_10155
Contig Sequence (6326 bp)
>contig_1558520 6326 assembly3_WGSMorex_rbca.fasta
ATCTTTTGCCTCGTTTAAAAAAAAATGTCTGCCCTAGAAGCACATTCGCTGGAGGCAGCA
TCGGGCTGCCGCTGGACAGGCCACTGTGGCAAGCTAGATCAATCGAGATGTGCTGTGAGT
TTCTGAAATTTGTAGGTTGCAACAAAGGAAACCAGAGAAAAAAATTCTGAACTTTCCAGC
AACTGTCTGTATTATAGTATGTGACACTGAAAAAGAAAAGTTTCAGAAAATAAAACACAA
GTCTGAGAGCAAGCGAGATGATTAACTAGATTCATTAATCCAATCCGAAACCGAGACAAT
ATACTGGACACAAATATATTAACAAGAACACAATTCGATCATAGCCACGACACCAAACAA
GCACGAAAATAAAATTTATTCGTGAACAATATTGGTTCACTTCACCAAGTGACAGGCTTC
CTTCCTACTTGCAGCCACTGCTTGTACTGTTGCTACACACTACCCAACCCTTTGTACCAG
ACAGCATCCCAAAAGATGCCTTTTCCGAGCACTTATTTTGCGGATCTGATGAGCTCCTCG
CTGAATTCCCAGAGCTGCTTCGCCAAGGCGTCGCTCTTCGCGTGCGCGCTCGTCCTCTCC
TCGTTGCAGTCTGCAAAGTATTTGCCTGTCACCCCCTTCAGCTGAGGGTTGAGCCCGACG
TAACAAGTAGTCGCTGCTCCCTGGAAGAAAGAAAAAACACAAAGTTCTTTGTAAACAAGA
TGCGGTCATTGTTTAGGATTATTAGGAATTTTGTTAAAAGCCAGGAATTGATAATGACCT
GGGGTACATTCTTCCAGAACACGTAAGTGACGACTTGAATTACCTCTGCAAATGAAAGCA
AAAGATAAATCATAACGCTGTGGAGACATGAAACTTGACATTTGAGAAACATAGTAGTTC
ACAAATAAATATGATCTTGAGCGCTTACTCATGAGAGCAAAGGAATGCCTCATCAAATTG
GTCATGATCAATCCAGGATGAACGCAATTAACTGTGATGTTAGCTCCTTCCTCCTGTGTT
AGCAGCACATAATTCATGGTACATCAGAACCGGACACTTAGTTGTGTGTGTGTGTGTTCT
GTGTGTGTGGGCGGGTACATAGAGAATTTAATACGTTCAAGTAGGTCAATTTAGGTCTAA
TAAAAAAATCATTATCCTCGTTAAAAGCAAATAAAAGGCTAAACCGCTGCATTATGGTGA
TGATACCTGATAACACTTTTATATAGCAATATACAAATCAAGATAAGCAAGGGTATTATT
AGAACCTAAGTAATATCTAGGCAGTTCATGAAGATCTGAAGTTATTACTCCGAAGTTTGT
GCTGATGAATGAATAAATAAGAGGAAAGACCGAGGGAGAAAAATGATACCTTGAGCCGCC
TAGAGAGCTCTTTTGCGTGCAGTATGTTTGCAAGCTTAGATTGTCCATAGGCCATTTTAT
CATTGTATCTGCCAATAAAAAAAAAAATTTGTAGCAGTTGAATCGATAATAGATTTTCTT
CTAAATATGACCATAATTAAGAACCCATACGTTTTCTTGTCATTGAGCTGATCAAACTGA
ATCCCCTTTGGATATGTATGGAGGTGGGCAACTGATGACAAGTTCACAATGCGACCCTCA
ATACCGGTAGACTTAGCAGTAGTTTTCATGTTCTCAAGGAGAAGGTTGGTCAGTAGGAAG
TGACCTGATTGAGCATGAATGAAAAAAGAACTTAGTATCAGGATATCTGCCATTGATTCC
GTCTATTTCAAATATTACTGGAAGCTAGAGACTAACCAAGATGATTTGTGGCAAACTGCA
TCTCAACTTCATCTTCAGACAGTTGGAAAGGACAGAACATAACACCTGCATTATTTCTGC
AGAACAGAAAGAATTTGGACGGCTTGATTCAGTGAAGCCTAGGCAGTACTGGAATAGAGT
AGCAGTGATATACAGCTACCCTAAACTGAAATTTATTGCGATGCAGCAACATACATATCA
AAGAAAAGCAGGTATGATAAGAGATGAAGGGATTACATCAAGATGTTTAGAGGAAGATTC
ATGGAGTTGAACTGGTCAGCGAAGGCCCTGACAGACTTGAGGGAGCTAAGGTCAAGCTTC
AGAACATCGATGCGGGCTACTGGGTGTATCTTCATGATGCGTTTCTTTGCCTCTGATGCA
GCCTCTGTGTTCCTCGCAGCGATGATGACATGGGCTCCTCTCAGGGCAAAGACTCTCGAG
GTCTCAAAACCAATGCCACTAGATCCTCCTGAAAGATATCATAATTGAGGCTTTCAGTAA
AACATGAGTAGATCATGGAAACATGTTATAAAAAAAGGGATTGACTGTGAGATAACTCAA
AAAGATTGATTTTATGACAGGCTTGGTTGCAATGTACTGATGGCATTAGTAAATGCCCCT
AACAAATTATTGCAAGTGTGTACGAGCATAACCCACACCCATGCTTATTGAATAAGCAAT
ATTGACAAGACCCAAAACGGTTCATCTAATTGTTCCAACACATACAAATGGAAGCTCTTG
CATTCCGTTAGAAGTCTCTATGTCCTGAACTTAGTATTGTTGCAAAAAACTTCTAGAAAA
AGTTGTTGTAAAGACAAGACCAGAAAAGCTCCCATCAATATAACCAGGCCCAATGAATGT
GAAAACTGTAGCCTCTTACAGATGTTGATAATTTTGACTTCAAGTAAATATCGGAGCTTC
AAAATCGCAGTGCAATGGAAATGATAAACAAGATTTTCATCTAACTTAAAGGACCTTGTC
ACTGCAGCATATAATAACTGCTGCGGTAGTCTAATGACCAACCAGGATTTTTTTTTTTTA
CAGTTTTTGATAACTTTGACTTTTCAAGTAAACATTGGAGCTTCAGAATCGATGAAAAGG
ATAGAAGAAGATTGTCAGTCATCTAACTGAAACTGAAAGGATCTTGTCACTGCATCATAT
AATCACTCTTGCTGTAGTCTTCTAACAACCAACTAGCAAAAGGGACAAAAATGACAGTTT
CTGCTAATTTCTACCAGCGGAGTACTTTTCAAGTAAACATCGGAGCTTCAAAACCGTAGT
GTACTAAAAAGGATAGAAGAAGATTGCCATCTAACTGAAAGGACCTTGTCACTCTTGCAA
TAAATAGAGCACATAAAAGATGGATAAAAATAACAAAAATACTATGTTCCTTCCAAATCC
CTATTCGTAAATTTGGTCACGTCATGATACTGACAAGCAGGGTGGGAGGTGCAGAAATTG
TCTGCACTACTACTTAAGAGTTAAGACAAGTGAAAGCTTGGATCCATGGTGTGGTTTACC
ATGAAAACAAAACATTCATCTCAACAAGGGCAGCTAGGGATATTTGATTGGTTCTAGTCA
AGAGGAGAAGTGGCAGATAACACCAACCAATTCAGGATCCATTGAAGGCCACACAAAACA
GTCCCCAAAGAGACAGGGCCCAGAAATCCAGGCTCCATGCATACTCTCCTTCTCCGCATA
AAAGGGAGATTTTTTTGGAGAAATATAGTACTCCCTCCGTCCTAAAATTCTTGTTTTAGC
TTTGTCTTGAAATGGATGTATCTAAATACTAATAGATGTCTAGATACGTTTATATCTAGA
CAAATCAAAGACAAATTTTTTGGGACGGAGGGAGTAATAAACAACGTCCTTGCAATTTTT
TGAAGAACAGATCATCACAACCAAGAGATGTACATCACAAAGTAGTGGTGCTTGTGTACG
AAAAACAGTTGCGACAACACATGTTCAGAAGTTAGTACTTCAGTACATACACCAAAACAA
AAAAAAATCCCGGTCGTAAACCCACTTCCCAACTGCTTGTCTAGGAGCGCAAGAAGAGAG
CAGAACAACTCCCTGTAGAAAAAATTCAGAAAGGTTGCAGACAAATCTAACCGACAACAT
CACAGAGACTATCCGAGCATTGCACGACGAACAAAGCCAGCTAATTTGATTCACTAGTAC
TACACAGTTAGCAGACCATCGGGGTTTAGGGATCAAAATAGTTTGATGTGAACATTGATA
GATAATAATAGTAGCAGCGCTGCTGTTCTTGTGCTGACAGCGACGCATAACAAACAGTCA
GATTCAGGGCGCGTGCGCCCCAAACAGGAAAGAGATTGTCACCGCGTATGACTGCCCAAA
ACGTCCAAAAGGTGGCGCCCCCATCACACAGCCAAGAAGATGAGAGTGGACACGACAGGT
GGCACTGCGAACGCCATTGGTGATCTGGCGGCGCAGGAGCTAGCAGAGGGGGAATCCGGC
CGGGTCGGGGTGGGGGTGGGGGTGGGACTGGTGGGTGGGTACCTGTGACGATGACGGTGA
GGGCGGCGGCGCAGATGCCCTCGGTGACCTGCTCCGCCGTGGAGCCCGACCCGAACCCGC
TGGCGCCCGGCTTGCCGGTGATGAGGGACAGGATGCCCATCTGGTTCTTGCGTCGGCTCC
CGAAGCTGCGGAAGAGAATGTGAGTCCCTCGATCAAGGAGAAGAAGAAGAAGCAGACGAA
TCTTGGCAAGCTCTCACCTTGACGGACTAGTCGATGGCGAGATTGGTTGTGTTGATTGAT
TGATGCGCGACGGGAAGGAGGGAGGGAGGGAGGGAGGAGGACGGCGTGCGCGAGCGGGCG
CAGGGGAGGTCCGTTATTTATGGCCGCGGGGAGCGGTAGCAGCGGTTTGGTTGGGGAGTA
GGCGGCCTCTGCCTACCGGCCGGAACGCAAACTCTGGCTGGACTCTGGAGCAGTGAATCC
GGCCGGCCCGGGACTCTGCTGGTTTCCTTGCTGGATTGCTTCCCTCCCTGAATTCCTTCT
TCTTGCACGGGAAGAATATTTGTGTGTGTGGTCTCTGGTAAGCAGTGGACAAAAAATCGC
ATCTTCCTTTTCTTTTGGGATGAGACGAGAAAATCGTATCTTTTTTCCTTGATGGTGAAA
GAGTCGGAGATCCAGAGGAGGGGAGTCCGGAGTCCACACATGTCGACCAACCATGTAATC
AGGGTTTGTGACCTCAAATTCTTTTATGTGTACACAACGATATTTATGCATGTATAGTAC
AGAAAATATAAAACTTCGAAAGTTCACATCAAGGAGTGTTTGACACACCGACAGAAGAGA
CCGAAACGCATGATATGTACGTGCGCCTGCTCTTTCAGATGGCGCTCGTCGGGTTCGTTG
AGTGCGGAGGATGGAAGGACCCGCGCTACATGTACGGAGGAGGACTTATGGTCTTTCTTG
ATGACGCCCGCCACTCGCAACCGCTGAAAAGCTAGATGATTCATAAGGATTACACGTCGA
TGAGGTATCACACACAATGCAGCGGGGTAACTCTGTTTATGCGATGAGTTGATCATGATT
TGCTAAAATTGGAAAGGCAGTCCTATATTGTAACTGGATCCAAACAGACGGTTTCCTGAT
CCCACGCATTCCCCAACTTATAATATCCTAAACCAACCGATGTACTAGGTCTTTGGTTTC
TCTTGCAATGCAAACCAGGAAAATTGCTTGGTCGGTGGTGACTTTCTAACTACACGTTTG
TCTGCACTTGTTCGTTTCTCTAGTTATTTATAGATGAGAAGAGTTGTGCATAAACAGAGT
CATATATATTCTATTGCTCTTGTCTCTGAAACAGGAGTAGGTGAGCAAAAATTAATATGT
GATCTTCTCTAACAACAATGAAGACAAAAGCAATACATGATACATTATATGTGATCTTTG
TCGGTAAAAAAGTAGTACACTGATACTACATTACCTTTCCCAGTCCAATAATTTCAGAAA
TGTTCTTCACCTTTTTTTTGCCTCATGACCAAAGTAGTTGTACTATAACTAATAAGTAAA
ACACGCATACACATGTCCAAAAACCCTCTTAATAATAAGTAAAACACACATAAACATTTC
CAAAAGGAGGGCGGCGTGCGCGAGCGGGCGCAGGGGAGGAGGGAGTGGGGTTATTTGTGC
ACGACCGAGCCGTCAAAATCCGGGACCTTGTGCCAAACTGTCAACTGAGGCCTATCTCCT
TGGAAAAAAATAAAACTATAATAGATTTATTTCTAGTTCCGTTCTGAGATTGAGTTAAAT
AATCTATCTGTTATATTTTCTCTTACGTTTTTGTTAATCTGATTCATATACTCTAGAAAA
ATTTTGTAGTGGGCATGGCATGGATCTTAAGAGTCTAGACAAATTGATGCATATCAAACA
GTCACTGGTAGAAAAAGAGGCTTCTGTTCAGCCCCATAAGTCGCGAAACTGTAGGAACCG
CGACTAATGATTTCTTTAGTCGCGGTTCGNNNNNNNNNNNNNGACCAAAGGCCTGGGCCA
GGGCGCTCGGTGGCCAGCTGGTGCAC
