Contig Data
morexGenes
Links



Map Locations of contig_1558516 (4847 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1558516

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10154 2 1287 bp AK363561 Available Available None





CDS Structure of MLOC_10154






Contig Sequence (4847 bp)

>contig_1558516 4847 assembly3_WGSMorex_rbca.fasta
CAAGATTGTGCCTCTCGCGAAAAAAACGTAGTTTTTTCCTTTCCGAAAGGCACGGGTGTG
CCTCTCGCGAAGGCAAAACCGTGCCTTTTACGAAAGCAAGATTGTGCCTCTCGCGAAAAA
AAAACATGGTTTTTTTCCTTTTCGAAAGGCACGGATGTGCCTCTCGCGAAGGCAAAACCG
TGGCTGTCACCAAAAAAACATGTTTTTTTGCGTAAAAAACGGAAAACACGTTTTTCCATG
ATTTTTTTTACAAAAGACCAACGAAAAACCGTAACTCCAAAAAAAAATCGAAACAACCAT
TCAAAAAAGACAAAAAGGCACGCAGAAAAAAAACATTTGTCACGTCACCACCGTGCGGAG
TGTAGGCCCGGTGCCAGTGAGCAGGGAAGGAGGGAGGCGGCGGCTACCATAGGAGGACGA
GCGTCGAGTGGTATATGCATGGACCGCATGGTGCTTTCCAAGTATCATTCTTATTCTTTC
TATAGTTGGTATTAAATTCATGCTTCATCTAGTTTATCTAAAAGTCCAAACTTCCAAGTA
TGTACTCTCTCCATCCGAAATATTTTTTCTTGCAAAAATTGATTAAAATGGATATACGTA
GAATTAAAATACATCTAGATACATCCAATCCTTCAATAAGTATTTCCGGACAGAGGGAGA
AGTTTATTCATTTATTTAGGCATGGACAGAGGGAGAAGTTTATTCATTTATTTAGGCATG
GTATATGTAGGAGTAGGATCGTAAAGTTATTTGGTTTCTATATAACGCTTGGCCAGTTGC
AGTCTCTGCTCATTGTAAACCGATCAGACAATCGAGCTGACACGGTGGCTCTACTATGCA
ACCACGAAGTCCCTCGCCTCAGCACCGAATGTGCACCTATATGACGTATGCACTTGTCAT
AAATTACATTTCCTGCGTCATCCTTTGTGATGATCTCTGCGCCTCTGCGTAGTACAGGCT
ACAGCCTAGCGAGGGTCTGACTGTATGCTGGATCGATGCAGACGACGACCTGAGAAGGTA
GGTTCCACAAGGAAATTTGTAAGCCACATCAACGTAGACGAGAATGGGCTCGTTTGTGGT
TATAGAGATGGTGGGGTCGTACCTTGCCGACGCTCTTGCCAGAATGAAGATACTCTACCG
CATCCACCGCGGAAGCAACGCCCAGGAATTTCTTAGGGTCGAGCGAGACCTGTCATATGC
GGTGTGACATGTGAAGCTGAATTATTAGAACGGATAAAAGACAAGCATGTGCAGATGTGT
TATGACTTTTTGTTGTTGTCATGTTATGAGCTATTGCTGGGTGCAGGGAGTGATGACATG
AAGAGGAGCAATTCCCATACTGAGATAATATAATACGGAGTACTAGGAAAATAAATGGGG
AACTGGGGCACGGTATCATTTTTTAGTGCGAGAAAAGAATAAGATATGTAGATAGCAAGG
AAATGAGAAGAAAGCAGGACAGTAGTTTAACCATTGGCAACCCACGTATTTGCTTGGTTT
TGTAATTTGGCCATTGTTTGACATGTGCACCTACTTTAAAGATGACCACCAATTGGCAGG
GTGAATTAGGGTAGGCACCCAATGTCCCAAACACCCACAGTTTTTCTCAATTAATTTCAC
ACAAAGTAGCAAACAGCAAACACATAATGTGAAGCGTTACCTTTAGCTTTCCAGAGGCAT
ACAACTCAAATAGTTTATCAAGATGTTCTTGCCACATGTGAGCATGTTGAACCAGGAAAA
ATCCAGCCTGAAATTGGAGAGGAAGGAGTTAATCGTTTTCTGCAACAGGGATGGAGTTCA
TAGCTCTAAAGAGTACACCAGGACAGAGTTCTATCGGATTCAAATCTATCCATAAGGCTT
AACATCTGTCTCGTATAGTTTATGAAGTATCCATAGAAGTAGTTTGCAGCTTCTGAAAGG
TCTGATATGCTATTAAAAAATGGTATTTCTAGACCTATATCCAGATAAAAAGATTCCAAT
CATAGCTAAAGATTGCTGTCTGTCTATTGCTTTGGTACACAGAATTTCGAACGTATTAAC
CAAAATACCATGTTTCTTTTAATACTGCAATAAGGACTAGTTGGATGCTCCAATGCACTA
CTGAGGAGACATTTTTTTCTTAGTCTTGCTGAGAGAACTTTTTGTGGTACATACAAACAA
TATAACACATTTTCAACACAGATGGCATTCTTTCTTTGTAATCCTATCAAACTGCTAAAT
TTGCTTCATGGTTTGGATCTACGAGAATCCAAGGATCCAAGTTTTGAGATCAACTTTCTC
AGTATGGTAGTTGTATCACTTTCTGATCAATTTATTGAACGGATATTGAGTACAAACGAA
GTACTTATATGCCAACTAAGAAAATCAGATACGGTGCTGCACACATACCACAGTTTGACT
TTTAGCAAGAATCTTCTCACATAGTCCAGTGTAGTTCTTCGGCTTCCATCCCTCCTCTCC
TTGATACTGAAAAAAAAACATCAAAGATTGTTCACTACCGGTTGGTATCAGTTCATCCCT
AAGCTATGACATCATAGTAAAAACAGCTACAACTAAAACAGGAATAACTGACACTAATTC
AGATAGGTGGTGTGTACAAATCACGATAATTCAATGATTTCCCTAGGTGCACTCCATGTC
TCCAGTTTTAAATACGAATGCATGATGGTCATATATTATGTAATAATGTCAGCAAGGACT
CTTCAGAATATTCTCAGGAGGGTGCTTCTTCACTCCACCAAATGATATCACACAAATCAT
AAAGCAACTGCTGTTACTAGTAACTAATGGCCTGTCAGATAAGCTTTTCGCCACAATTTT
CATATTCCCAATATATAATAATTCAAACGGAAATAACTTTCGGAAGCTGTCGACATTACC
TGAGAGATCATACCAATTACAATGAGACGTCCATGGACTGCGAGCGCATTCAAGCACAAA
TCAAACATTTCCCCACCTACAGATTCATATATAATATCTACACCTTTTGGAAACTCCTTC
TTCAGAACCTGGAATCAAGCATTCAAACAATCAGTGATTACTGAACACACTGAGAAGAAC
AAATAGCAGGTCAGTGAAAATAACAGTCACTTGAAACCTATGATTTTGGCAACATACTAC
TGGTTATAGTCATTCTCTGCGGAGACATTAGAGCATAAATGTAATTCAAGTATTCCCAAC
CAAGATCGTGCATCATCTGTGGCACGTGAAAGGCTGTACAAGTGTAAGAATTATTATTTT
TGGAAGATTCTATCCTAGTAAGTAGAGGTACGATACAAGCGCACAAAATTAAATGGTAGA
TGGGCTAGAGAATATACCCATCACATTTTTGTAAGTATAATAAGAAAGGCAATGTTATAA
ATTTGAATTTGAAGTGGCAGAAATATGAAAAGCAGAGCCAGAAGAAAGAAGAAAGCTTAC
GTCTTTGATCTTCTCATGCTGGTAGTTGATAACTCGATCAACACCTAAGGAAGCTAGAAA
TGCAGCTTTACTTTCACCGCCACATGTGGCAACAACCTTGTTGCCTGCTAGTTTTGCAAG
CTAGTGAAGTAACAGAAGAAACATTCAGATATAAGGATATGGTTAGGTACTAAATCCAAT
AGCAGTTGCTTAACAAAAATGAATAGCATATAAACAAAAAATAGAACCTTGTCCATGTCC
TAGAAATACCATATGGAATGTATGACCAAAACATGGCCCAAATGCTAGTTAACTATGAAA
GACGAACTATACATGTCCCAACTGCATGAAATTGTATCTTGTGCAAGTTTCAAACAGCAA
TGTCGAATTTTATATTTATACTGCTTAGGTAAACTGTAGAAATAGATAAGCAATTGAGCA
TAACATCAAACCAAAATAATCGTATAATAGTATCAAAATAGTATCAGCCGACCTGAACAG
CAAACTGTCCTGTTCCACCAGCAGCTGCTGTAACTAAAACAACTTGCCCAGATGTCATTT
GACCTGCCTAAATGCAGCAGAAATCAACTTAGATCAGAACGGGAAGGAATATATATTCAA
AATTAAAAAGGTTAGTTGACTAAATATAAGGTCAAAGTCGCAAGATATGCAACCAAAAAT
TTGTATCAAAATAACCTTTTCAAGAGAAATTGAAGCGGTCAATCCTGATGTTAGCATAGC
AACGACCTCCGGATCTGGTCTTGGCACCGGAAGAAGATGTTTGGCTGGAACCTTTCATTA
GAAAGATGTAAAGACTAATATTATAACTGGCAGACGAGGTGACAATATCCAAAAGTACAA
GCTCAAAAGACTGGGGATGTTTTCATTCCAGTGACGACAAGGTTAATCGGCAATTTTTTG
GGTAGCAAAAAGATGTGGGCATAGACCGCAATACCATCGTAAATTCAGCATAGCTTCCAA
AAGTCATAAGGGCCACAGGACTGCCGACTTTGATATGGCTCACTGCATCTCCAACAGAAG
CAACAATTCCCACAGCCTGTAGATATTAAAGTTCTCTTGAGAAATTCTAATTGCCCAACA
AAGATGTCAAGAAGAAATTTTCCATATTTTCAGGAACAAACATAATTAAGTATCACAACA
CTTGTCACCTGTGTAGCAACAGTATACTAAAATAAGAGCAACATTTTTTTGATGCAAGTA
CGTGACATGCCAGTTTTTTTGTTGTTGAAGTACCAACAATAATTAAAATCGTGATTCAGT
TTCGCAACACAAGAAGTTTTTTTTTTCGAGAAAGCGCAAAGGACCTTTGCGTTTCATTAT
ATTGAAAAGATAGAGTTTGTTACAATCCTCCTAGGAGGCAGGATACAAGCATTCTAATGC
TACTTAGTGTACATCCCATGTCTGCGGTAGGATAACCCGAAGCCCTT