Contig Data
morexGenes
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Map Locations of contig_1558503 (5302 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1558503

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10146 2 2404 bp MLOC_10146.1 Available Available LOC_Os12g02800.2, FRAME:-1, EVALUE:2e-25, 13112.m00226 protein CRP11 - Cysteine-rich family protein precursor, expressed
MLOC_10145 1 2151 bp AK368925 Available Available None





CDS Structure of MLOC_10146






CDS Structure of MLOC_10145






Contig Sequence (5302 bp)

>contig_1558503 5302 assembly3_WGSMorex_rbca.fasta
TTAGTCTCTTTAGTATTTGGATCCAAGCNNNNNNNNNNNNNNNNAGTTTTAGTCCCACTA
CTTTTAGTCATNNNNNNAAAACGTATCCAAGCACCCTCTAAGTGCATGTACAATTAAGGA
GACTATGTGTAGAATGAATTGGTCTTGTTTACCGTGTGATGAGAGAGAAGCATTTTTTTC
TACTTTAAAGTGCATTGGGAAGGTAAAAGTACACTCTTTTGTGGATAAATTTTAAAGCCA
AACGTAGACTCTTCACCGGAGGGAGGGAGTATGCACTTATGGTATATAACTTTTACTTGA
GGTAGTACCTCATTGGCTTTAGTTTTTGTCATGTTGTTCAGCTGTTCACAACCTTTATCA
TTTGGAGTTCAGCATCTATTACGGTTTAAAGTTTCATATGATGAGAACACATGTTTTATT
GTATATATCATTTTCCTTAACAATACACACATGTCCTTGTGTGCCCCAAGCGCGAGGTGA
AACGATTTGCTGATCTAAGTTCTGATGAGACTGGTGATTTGTGGGTAATTGCAAAGGAAG
TTGGTGCAAAGCTCGAGCAGTACCACAAAGCTTCCTCCATCACATTCGCGATTCAGGTGA
AGTCTATATCTATTTCGTGAATAACTCAGTATCCAAATTTTATTTAGTTGGTGTGTACCT
TATTGATTTTCTGTTGTGGTACACTGTACACAACAAAATAGAATGGGTTAGCCTTTGATT
ACACCATGCACCCCGTAGACAACAAAGTTAAATTTGATAGACATATAATGTTAGACTCGA
AGTTTGCTAGTTGCTCTCGAATCATTCACTCTGGTTTTGCCTTTGGTTACTGTGTTTACC
TTTACCTTACAAAGTTACAATAATCGATGGCGGAAGAAGGAGGGCTTGCTGAATTACATC
TATTTGTACTTGTCAGGATGGTCCTCAGGCTGGCCAAACAGTTGCCCATGTACACATCCA
CGTCATCCCCAGGAAGAAAGGAGATTTTGAGAAGAACGATGAAATATATGATGCGGTACA
TGACGTTGGTGTTCTGTTGATATTATTGTCCCATCTGGTTTTATTTTCTTGTTGATTTTC
ACGTAAAGCTTGCCATTTTGCTTTGTAACAGATTGAGGTGAAAGAGAAGGAAATGAAGGA
GAAGCTTGACCTAGACGTCGAAAGAAAAGATAGAAGCATGGAAGAAATGGCTCATGAGGC
CACCGAGTACCGCGCTCTTTTCTTCTAGCCAGACAAATGTATCTCTGATGAACTCTCTAA
TTTTCTGCCACTCTTGCCTAAAACTAGCCTTACGATTGTTTGTCCTTGATTGCGCGGTGT
GGTTCGTATTGTCCACGGACCTGGCAGCACCAGTCCAAATCTGATGTAGTGATATTGCAA
GACCGCTTGTTCATCGCGCTGGTTATTCTTCGTTGCGTGACTACCGAACTTATTTTCTTG
TTCCCCACTGATCTTCCTTTTGGAAAGGGGAGGAAAGGAAAAGATTTGAGCTTATTGGCA
TTTGGTTGATGGAGATGTGGTGCATATGTTCTGCCACTTGGCGTCAAATGACAAATGCAC
AATTATTGTTGGCACCTAAGTACAGTCATAGTCAGTGCATTTTTTTTTTCTTGGGTGCGT
GCAAGAGTCAGTGCTTTGGAAAGTGAAGGTTAGGTACTTGTACCTGTCTATCTTGCGATG
CTTTCCACAGAGTCAGCACGGGAATTTTTGCTTCGGCAGAAAAGGCAGGTGAAATGAGTC
AAACACGACAGCTGCCAACCCTCAACGAACGAGTAAAAATATATATTTCGACAGTGCTCA
AAAGAATTGAAATGGGTACAAGGAAATGAAAAATAAATCGTGAGATGTAACCTTTTTCCA
TCCAAATTGAAGTAAAAATAATAGTATGTCAAAAACAGCTAGCAGGTGATCATTCACGAC
TCACGAGGCCGGTCATTAGCTGAACGGCGGTCGGCAGCGACGGGGATCGCCCTAGGTGGT
GGTGCAGTTGCTGCCGGCGCCGCAGCCGCATGTGCGGGGGGAGAAGGCGCAGACGCCGAA
GGGCTTGCCGGGGACGTTGCAGTCGATGGCGTAGCAACACCGCGTGTCCACGCATGAGCT
GCTCGAGCTGGCGCTGCTGCTGCTCCCTGCCGCCGCCGCGCAGCACCGGCACCCCATGCA
CAGCTGGAACGGCTCGTACCTTCCTCCGCCGCCCGGCGCCTCGTCCCCGGCGGCGGCTAC
CGTCGCGGCCGGGAGCGCCACCGATCGGTACACCACGGCGCGCACCGGCACGTACCCCGC
CGGCGCCGGCGATGGACGCGACGTCGCGCCTCTGGCAGCTTGGATGATGACTAGGACCAG
GAGGAATATGAGAGAGTTGGACGGCGCGTTGTGCGCCATGCTTGCCTTGGGCTTGGGGAG
GATGGAACTACAGAAGAAGAGGCAATTAAGCAAGCTGCACCCCTTTTGAGGTTAGACAAG
GGGACAATGGGTTTGGCAGGAATGGACAGCAACTCCTCATGTATAACGAGATCATTTCGG
CTAGTTATAGGGTAATGTTATTCAGCGAACATTCACTGGGTGTACATGGTAAAACGAACA
TTTTTCGTGGTAGTTTATGTGTTTCAAACATGGCAATTCTTTAAAACGAACACGACAATT
CTCACAGCAAAATCCTCTCCTTGCCATCAGTTTTCATGTGTTTTTGAAGAAATTGGCACA
TACTTCCAAAGAATTCCATAAAAAAAACATTCGCAATTGTTATGCCCCACAGTGAGCGTT
CAATAGCTTTTGGGTCCCATATTATGTGTTGGAAAATAAAAATAAAGCACACGGAGTTAA
CACCTAGAAACAAAAACACCGAGAGGTGGTACCAAGGCAAGGCGGTCTCCACTGCTTCAA
CACCTCGCAAAATTTGACAAAAAAAAGAACTCATCCCTCACATCACCGTAGTGTAGTATG
AGAATGAGCACCTTTTTTTCTTCAACCGGGCTCATACCCCTTTCTATTAATTGCTTAACG
GAAATACACCGGTCTCAGTTATATCCGAGAAGCTAACAATAAAAAATGGAACTGAAAGGG
AAGAGTGAGTTGGAGCATCAATAGGAACCCCACTGTGAACGATTCTAAAACAAACCATCC
ACTCTGAGGCGAAAACCTATTGACACTACTACGTGGCCTCAAAAGCTTTAACGACATCAT
CTAGCAAATAAGGAAACAACCAACAACAAAAGGAGACTGCAAGTAACTTAGCGGGCATCG
AACCCGTGTGAGGACATCTATTAACCATCGAAAGAATAGGGTTCGGCCCCTCACGCCCAG
CTTTGCCCCTAGGGCCAGCCTGCCTCGCGAGGTCAAACGATCTGCAAGCGAAACCGCGAC
ATGGACCATCCTCTGAACCCTAGCCTCGAAATTTTCTCTCTCCACTCCCTTCAACAAACC
TGACCAATACATGAGAAAAGAACATTCGGTAAACACTGCCCCAAGAGGAGATCGCACAAC
ATGATTATCAAATGCGCAACATGATTATCAAATGTCACTTTGTTACGAGTGCATCAGATC
CCCCGGCAAATAGCAGCAATAATGGTCATGTAATGTTGTTTACCACCAGGTAAGTATCTA
TAGAGACAAACCCAACTTTGCCACAAGTATCAGGGGCAACAAGGCGCGCTCAGTGCTAGC
CTAAAGGCACCCGAAACTGATCTAGCAAAGGCACACCAAAAGAACAAGTGATTAGTTGTT
CCATGTCATTAGAGAATGAGCACAGAGGGTTCCCAGGCCATTCTCTTTTCTGCATATTAT
ATGTAGTAGGGATGACATTTTGAACAATTCCCACAAGAAGACTTTGATTTTTAAAGGAAC
CTCGGCTTTACATACCCATTTGTAATCAGGCCCCGACAGATCTCTCTCGAGCCACTCATA
TACTGATTTGTGGTGAATTCCCTTTTTTTCAAATTTCCAGGCTACCTTGCCACACGAAGT
TTTTAGAGCAAATGATGGTCATGACAATATTGGCCCACTGTTCATCTAAATGAGAAAACA
GAACACGTCTGAATTGTAAAGCAATTTCTTTTCCTAGCAAATTCTGCCAAAGTACAATCC
TGATCACGACAAATCTCAAACAATACATGATAGGTTGTTTTCAAGGGAACATTACTCGTC
CATGGATCATGCCAGACCCTAGCTAGATCCCCCTTATTTATATTGATCATCCTACCATCA
TAACTGCTTTCTAGCAGGGGGAGTCATTGAATCTAGTTTGAACATTAGACACAGTCTTAC
GCTTAAAGTATCTAGCATGCACAATGCGTTGCCATATGCCATCTCCATACTTCGGTCTCC
ATCACCATTTGACTAGGAGGCTAACATTCTGTTTGTGGAGTTCTTTAATACCCAATCCAC
CAATGTTCTTAGAATGACAGACCCTGGTCCACTTGACCATATGGTAAGCCCGTTTTTTCT
TTCCCTTCCTCCAAAAAAACGTCTATGACAAACATTCATTTTTTCTATGGAAGTCTTGTT
AAGAAATAACATAGACATAAAGTACGAAGGAATCCCATCAAGGGTAGAATTAATAAGAGT
AACCCTAGCTCCCGAGGAGGCGATATAACTAATCCAAGCTGCCAACCTTTTTAGCAATCT
TGCATCAAGGAAGTCCTAGTCCACCGTTTTCAGCATTGCATATGTCACATGGACTCCCAA
ATATTCCATTGGAAGTTTACTAACTTGACAACCAAACATATCAACATAAATTTGATCAAT
ATTATTATCCCCCTCCCCAATAGTAAAAACATCACTTTTATCAAAGTTAAGTTTTAGGCC
CGACATTAACTCAAATAGGTTGAGGAGCAGGTTAACATTTAGTGCCTTCTCCACATCATG
AGAGAAGCAAAACACGATATCATCTGCATATTGAATAACGCACACGCCCTCATAAATTAC
ATCAGGAGCTAAACCTTGAATAAGAATTTTCTTTGGGCAGCTAGGACCATTTTTGTTCGG
CATTAAACATCCAAATTAAACAAGAAAGGGGAAACCTGGTCCCCTTGCCAGACCACTTTG
GAACTTTGAATCTATGGACCCAATTCATCATTAATTTTGACACTGGTCATGTCACTACGT
AGGATCTGAGATACCCATGTCGGGGAACGTCGCATGGGAAACAAAAATGTTCCTACGCTC
ACAAAGATCAATCTATGAGGATCAACATCTACGAGAGGGGGAGTATATCTACATACCCTT
GTAGATCGCTAGGCGAAAGTGTTAAGAAAAGCGGTTGATGTAGTCGAATGTCTTCGCGAC
CCAATCACGATCCGTCCCACGA