Contig Data
morexGenes
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Map Locations of contig_1558484 (2088 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1558484

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10142 6 1671 bp MLOC_10142.2 Available Available LOC_Os02g40030.2, FRAME:-3, EVALUE:4e-83, 13102.m04453 protein transporter family protein, putative, expressed
MLOC_10141 1 341 bp MLOC_10141.1 Available Available None





CDS Structure of MLOC_10142






CDS Structure of MLOC_10141






Contig Sequence (2088 bp)

>contig_1558484 2088 assembly3_WGSMorex_rbca.fasta
TTATGGGTTTCAACTCTAGCCTACCTCAACTTGTTTGGGACTGAAAGGCTTGGTTGTTGT
TGTTGTTTGTTGCTTAAAAAAATAACATACAACATAAACACATAAAGCAATCTCAAGACC
TTCATGGCAACTATATAATATAAATATGTTTTTACTGCTTTCAGAAGTAATTAGAAGCAT
CCACAAAACATTAACTGCAATGAAATAAGCATACTATAGAGATAAGTCAGGAGTAAGATT
AATCAGCAACCCAGAAGATTTAAGAACCTATAACAATCAATCAGAAATCAAGAATAGTGG
ATTCTAGTAATATAGTACTCTGAAAATAGTAGTGTAAGTGTTTCACTGGCTCGAGTGAAA
CAATATGTGTGCGATCCAAACTATTTTCTAGGATTCCATCAGTAACTCAGTATTTTATTA
GGTAAGATCATATAAATAGTGGGAACAAACAAAATAATGCCTCATGAGCTAGTGTGTCAG
TCAAAACTCGACCCTTGATACCAACTGGTTATTTGCGGACAAATAGACAGTGATTCAAGC
ATCTCTAGTGAAGTCAGTAAACAAGCAACAAGATGGTGTTTTTGTTAGTAAAAAATTGTG
ATACGCATCCCCAAGTACTGTAGTCTTTAGATGCCGTAGATAATCAAATCAGCATTAATT
TCAAAATTTAAGTCGCCTATACCTGAAATCCAGGGGAATAAAGGTAAGGAAATTCAATAG
TTGTCTTGAGGTCGCCCTGAATATATGTCAAGAACAGTACTGCAGGTCCACAAACAAGTC
CTGAAATCCAGATAAGCAGAATATATTTATGGCGTGTGAAGTACGAAATTGAATCTTAGT
GGTACAGGTCTTTGAGATACTACCATTGCACCACATCAGGCCAAAGCTATTCAGCCCACT
AGATTTTCCTAAAAGAACAAAACTAGTGTTGATTAGAAATTTATGCAAGTTGGATTGTCA
TATAATAAGTGGCAAAAAGGAAGGTGCATTACCAATACGATTTATAGTTGCAAGATAAAC
AGCTGTAGTTATATTGGCGACAAAGACAATGGCATACCCACGAGCATCAAATGATAGGTC
TCGAGCCCCAGCAATAAATGCTCCAAATACAATCAAAGCCACACTGATAAACAGTTGGTT
AGTAACAGAAAGAGGAATATGGCAGATTGAGAAAGGAACTATGGAAAAAATGCAGTATAA
CAAAACACAAGATCGCCAAGTTGACTAAATGAATATGAATTCGGGTAACTTATTCCAGGT
GATAACGATATAAGAGCAACAAGCCCATTCGATCACTACAGATGAACTAAAGATATGACA
GGCAGTCAAAGTAAAATAGAACTAATTAGTTCATATATATGTTTGACACTGGCTCGGACA
GGAGTTTCTTGCACAAATAGAGGCTCATATTAGCTAGCTAGCATATGTACTTTCAATCTG
AGTTTCTTGGCTATGAAAATAACAATGTTGAGACAGTACAAATGCAAAGTAAAGTAACAA
GTCTGGACATTTACCTGCCGATTATAGGTGGGGTGTGTTTCTGCTTTGCCAAGAAATACT
CCATTGTCATTGTAAATGCTACTGTTGTGCGCCTCAGAGTTGTATACATAGGAACATTTA
CTCCACGCACAGATTCCATTGAAGCTAGCTTTTAGCAAATCATAATCGAAGGTAAGCACC
ATTCAAAATTCAAAGTAAACAGCAAAAAATTCCATATTTGTAGCTCAGGACTGTAGTTGT
GTGCGAGGGAATAAGCATACCATGTAGAGTAAATAAGACAGTGAAAGCGGTGAAGTGCGC
AACAGTATTCTGAACGGCACAAAGAATAGTGAATCAGAGGGTACTGATGGTTCACTATTT
GTGAAAGAAATGATCTTTAACCGTCTCAGAACATAAAGAAGGCACGTTGAGCACACCATC
TGCACATGTTAATTAGGTGTCAGAAAGGAAAGACATGACCAAGCATATCATACAGTAACA
AATTCAGCCAACAGAGCTGTACAGCTAAAGGAAGTAAGTACATACTCCCTCCGTTCCTAA
ATATAAGACCTTATAGAGATTGCACTATAGACTACATACGGATGTATA