Contig Data
morexGenes
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Map Locations of contig_1558472 (9176 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1558472

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10131 3 4341 bp AK363365 Available Available None
MLOC_10132 1 1350 bp MLOC_10132.1 Available Available LOC_Os08g19610.3, FRAME:-3, EVALUE:6e-27, 13108.m02043 protein peptidyl-prolyl cis-trans isomerase, putative, expressed





CDS Structure of MLOC_10131






CDS Structure of MLOC_10132






Contig Sequence (9176 bp)

>contig_1558472 9176 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCCTAAATTCATGAATCTCCACATAGCCTAGTTGGAGAAAAATAT
AGCTCATCCATTTTCTAAAATAATAATTTGCCTAGCTAGTTGCAGAGCATAAGGTTTAAA
CTAGGTTGTGGTGCCCGAAACGCGATGTATTTAACTCGTGCAGAATCTGCTAGTTTGGCA
GAGGAATCTTTACCAATTCTGGTAAGATTTTGTTTAAACATCTGAGTAAAAAAAACGCTT
TGAACTAGTAACCACATCAAAAATTCAAAAGAAAGGAAGACCTGAGTACTTTTATAAGTC
CACCTCCACCGCTCCACGCCAATCAGGGCCTTGTTCTAAAACAAAATTCCCGTCGCCATC
TTCTGTCGCTTCGTATACGCTCAACACCCACTAGCACTCAAGGGAGAAAAAATGAAACAG
AGGCAAAAGCTTTGCCTCGTCGATTAATTAAGCTGAAGAGAGTTGCCCGGGTAGTTAGCG
GAAAACCGTGCAAAAACCAGACTGAATCATTGGAACTACTGATGATGTTGCTAGGTGTTC
GCATTGCTGGAAAAAGAGCCACCCAGGAAACTGGGGTCAAGGCAGGTTGCTTCCTTGGCT
CCTTGGACCAGTATTCATGGTGGGTGCTTAGCTAGTGGGAAAACAGGCTCTGGAAAGATA
CTAGAGTACTAAAAGCTTATGTCTCACTTGCTGAAGCTTGCCCCTTGGTGCTGTTCCCGT
AGGGACCCCCCACTTTGAACTGCACCAAAGCGATAGGTTGCTGTGATGCTAAGGTTTATG
CCAAATGGACAGAAATCTGCTTCCTTTCCTCTCCATGTGGCGTTGTCGCATCTCAGATAG
GGTATCGGATTCCATTTAGAATAGAGCATCACTTTGCTGGAATCCGGTCTTTCTTGAGTT
CTGGTTTTTGTGCTGTCAAGATTGCTCGGATTCATCAATGGATCAGCCTAGGAACTTTGG
ACATGTTATTTATTTATGTATTTATTTGTTCCAATGCTATGCTAGAAAACAAAATTTCTG
TTCAGATCAGCAGATAAAAATGTGTCAGCATCTCGGATCTTTTGATGGAGACTCCATTAT
GAGAGTAGGTGTCAGGGTCACTATTTGCAGTGGTAATATAAAAGGAAAGTTGCATCTAGG
AAATTTGCTGTCTGTGTGTATATACAATCACCACTTTCTGTAAAAAAAACTATATACCTG
TTGGCACTGACTTGTTGGCGCAATCTACTCGTCTAGGAGGAACGCTATCTCGTCGTCGTC
ACGTATTTACAGCCATTTCCTTTTTATTAGATGCTCTGCCATCCCATAAATTGTGGCAAT
TTTGGCAGGAGATGGATGGTGGCAATTGAATAGCCAAGGGCTCACTTCTTTTACCTGCTT
TCTTTGCAGTTGCTGGGGCCATAGCTCTCAAGGACTACTCCGAGGCTGGGTTCATCGTCT
TCCTCTTCACCATAGCCGAATGGCTCGAAACCAGGGCGTGCGGCAAGGTCTGTTGTCCAA
AAATTTCTTTCACCTAAGAGATCAGAGTTGTGAGGTCCTCTCATGATCCCACTTACCAGG
GAAGGGAACTAATTTTTTCGACGACGTGGCACGGTTAGGAGCACATATTCATACTGATGC
GGCATAACAAGACATGTTGATATTGATGTGCACTAGCCCCACTGATGGACATGTGAACAT
TTCTCTTTTTGAGGAATCTTGTGAACATATTTTGGTCTGCCATTCTAGGGGTAGTAGGTT
GGAGTAGAGTCAGGCCCATTTCACTGATTGTATCGCCTTTTTAGCATACATTGCCTGTCA
ATTCTCAGCCAAGAGACTGATGAACTTTATATCTAGTGGACTCAAACATGCATATACACT
CATATCTAGGTGTAAAACATGATTAGGGAAATCCACTCCAATAATTTTTTGGAAAGAAGA
TGAGCTGAAGGCAACTACTAAAAGTGATGTCTTCTCAAAAAGCAGCAGTAAACATTAAAT
ATGTCTACATGGGCAACAGTTTTTCTTTTTGTGCTAATTTGTCCCTGAAAAATCTGATTA
AATACTCTTTTGACATGTAGGCCACTGCTGGGATGTCGTCACTAATGAGCATGGCACCAC
AAAATGCTGTCTTAGCAGAGACTGGACAAGTAGTTGCTACTCAGGATGTGAAGATCAATA
CAGTAATAGCTGTCAAGGCAGGGGAAATCGTCCCGATCGACGGTGTTGTTGTCGATGGTC
GGAGTGAGGTCGACGAGAGCACCCTCACGGGAGAGTCCTTCCCGGTGTCCAAGCAGGCAG
ACTCCCAGGTCTGGGCTGGCACACTCAACATAGATGGTAATACCATACTACATTGCCACT
GGAATCGGCATTTGCTGCGATGCCTAAAATGCACCTCTGATCGCTGATCATCCACTGATT
CTATATTGATGATCTGTCAGGTTACATTGCTGTGAGGACAACTGCTATGGCTGACAACTC
TGCGGTGGCCAAAATGGCAAGGCTGGTTGAAGAAGCCCAAAACAACCGATCCAGTACGCA
GAGGCTGATCGACACTTGCGCCAAGTACTACACACCTGGTAATCCAGATACAGGAGACTA
TGCCTGTAGCGAAAATTCAGTCACTGGCAATGTTTGGGATTGGATGGTTTTACTAACTGT
TATTTTTGGTTGTACCTCGCAGCTGTTATTTTCATGTCTGCAGCAGTGGCAGTGATCCCT
GTGTGTCTCAAAGCACGCAACCTGAAACACTGGTTTGAACTGGCCCTAGTTCTCCTGGTG
AGTGCCTGTCCATGTGCTCTGGTGCTGTCGACACCCGTGGCAACCTTCTGCGCACTACTG
AGGGCCGCGAGGACGGGGCTCCTCATCAAAGGAGGGGATGTCCTTGAGTCCTTGGCCAGT
ATCAAAGTTGCTGCCTTTGACAAGACTGGTACAATTACTAGAGGGGAGTTCTCTGTGGAG
GAGTTTCAGACAGTTGGTGAGCGTGTTTCGAAGCAACAACTTCTATACTGGTGAGTGCGG
CTTCCATATCAGAATGCTCAAAGTTCTCGCCGACATTATGTTCTTCGATCTTATTGTGGT
ATTTTAATTTCATCATGACTGTTACAGGGTTTCAAGCATCGAGAGCAGGTCGAGCCACCC
AATGGCAGCTGCTCTTGTTGGTTATGCTCAATCAAACTCCGTGGAGCCAAAATCAGAAAA
TGTTGCTGAATTTCAAATGTATCCTGGTGAGGGGATTTACGGTGAAATTGGTGGAGAGGG
CGTATATGTTGGGAACAAAAGGATCTTGGCAAGGGCATCGTGTCAAATAGGTTGGTGAAA
TGTGAACTCAGCATTTACATATTCAATGTTGACAACATTCTTTTGCTATTTACCATTGAA
CTTACTGTTTAATAAGAGACAAACCTACCCATGCATGAAGTTACTGAAATGAGCATTATT
AACTTAACATTAAATTAGTCATTTTTACAGGATATTTTGCTTCATTCTTCCTTTTTGTTT
AATCAAAAAATTCTGGTGAAATCTTGAGCTGTTAACTGATCATGTGCAACATTTTTTGTT
CTAGTTCCAGACATAGTAGAACACATGAAAGGAGTTACCATCGGATACGTGGCCTGCAAC
AAGGAATTGATTGGGGTATTCAGCCTCTCGGATTCATGCCGAACTGGATCAGCCGAGGCC
ATCAAGGAGTTGAGATCACTGGGCATCAAGTCAGTGATGCTTACTGGCGATAGTACTGCT
GCTGCCACACATGCACAGAACCAGGTAATGATTTATTTTTTATGGAGAATATATAGGTGG
ATCTTATTGTTTTGTGTTTTCATTTCTCTAGTGGATACAAATCCAACACCTTCTAATTTT
TCTGTTTCTTTTCCTTCTGTGGCAGCTGGGTAACATTCTAGCTGAGGTTCATGCTGAACT
TCTACCAGAAGACAAAGTGAGAATTGTTGATGAACTGAAGGCAAGAGATGGCCCTACACT
GATGATTGGCGATGGCATGAATGATGCCCCAGCACTGGCCAAGGCTGATGTTGGAGTTTC
CATGGGCGTGTCCGGTTCAGCCGTCGCAATGGAGACGAGTCACATTACTCTGATGTCGAA
TGACATCCGCAGGATCCCAAAGGCTATCAAGCTGGCCAGGAGGACTCACCGGACCATCGT
TGTGAACATTGTCTTCTCGGTGACCACGAAGCTTGCAATTGTTGCACTTGCATTTGCCGG
TCATCCGCTTATTTGGGCAGCAGTCCTTGCTGATGTTGGTACATGCTTGTTGGTGATCAT
GTACAGCATGCTGCTACTGAGAGAGAAAGGCAGTGGAAAGGTGGCGAAGAAATGCTGTGC
TTCTTCTCACTCAAAGAAGCATGGGCACCGAACTACCCACCACTGCTCAGATGGTCATCA
CCATGAGAATGTATCAACAGGCGGTTGCGTGGATTCGTCTGCAGGTAAGCATTCTTGCCA
TGATCATCACCATGAGCATGACCACCACAAAGAGCCGAGCAACCTGCATTCCGTAGACAA
GCATGGCTGCCATGATCATGGTCATGTTCATAGCCACTGCAAAGAGCCGAGCAGCCAGAT
GGTCACAAGCAAGGATGTTGCCCATGGACATGGCCATACCCACAACATCTGCAACCCTCA
CCCTGCTGCAAACAAGCATGATTGCCATGACCACGAACATAGCCACCACCAAGAACCCAA
TAGTTCACATTCTGCCGATGAGCATGATTGCCATGGTCACAAGCACTGTGAAGAACCAAC
CAGCTTGCTTTGTGCCACTGAGCATGCTTGCCATGACCATGACCAGAACCATGAGCATCA
CTGCTGTGATGAAGAGAAAACAGTCCATGTTGCAGATACGCATTCCTGCCACGACCATAA
GCATGAGCAGGGTGCAGCTGATTCAGTTCCAGAGCTATCGATATGGATCGAGGGTCAATC
CCCTGATCACCGTGAGCAGGAAATTCAATGCAGCACAGAACACAAAGAGGAAGCGTGTGG
GCATCACCTGAAGGTCAAGGATCAGGTCCCAGCTAAGACAGATTGCAGCAGGGGGGGCTG
TCACGGTACCGCGAGCAGCAAAACCTGCGAAAGCAAAGGTAAAAATGTTTGTTCAAGCTG
GCCGGTTGGTCGCACCGGAGTTGTCCGCCGGTGTTGCAGGACTAGAACGCACAGCTGCTG
CAGCCAAAGCATGTTGAAACTACCTGAGATAATAGTAGGATGAAGAGTATATATGGTATA
TGTCGGTAACCAAAGTGAGCAGCTTTATAACTATCTAAAAGGAGTCAGCAACTGTTGAAG
GCGCCTCATCGGTGTATGTAGCTGGATTGCCATAACTGATAAGAGGTACTATTTGTGCTG
GTTATGCTGCTGAAGAAATGGGGTGGAGGCCTGAATTTTGATGAAGCAGGTGTCTGTCTG
AATGGATAAGCTGCTCTTGCTGTCTTCTCCCTGTTGGATTTTGCATCTTTTCAAAGAATT
TGAGAAGCCGCAAAGGGAGATACGTTCATATTATCAATGTGCTCCAACAATAATAATTGA
AAGAAGCTGGTCTAGATCAGTTTATAGCTTCTTATTAGGTTATCTTTATTAGAGTACCGA
GTTGTAGCCATCCTTGATTTGTGTGTGTGAAACAGCTAAGTTCAGTTATTATGAAATGCT
ATGAAACGTTGCATAGAATTATGATATGATGTTGGTCAAGTTATGAAATGATGTTTCCTT
TTAATGCGGTTTCAGTGTTTCGCCCTAACTAAGATAGTAAACTTCTAAGGATGTAAATTG
TGGTTGGGCAAGAGCTTGAAAAGGCGCTGTTCTGTAGAACCTAGATACGTTTTATGAAGG
CATGTCTAGATCACGTCTAGATTCTGTGCAATAGTCGCTGGACCTTGTACTTTATGAACC
CCAACATGGCAGCTTGTTGCATTGTTACTTGTCAAATTACTTTTAGTTCTCAGTTTCCTC
CAAAACTTATGAGGGTTACAATTTTTTATAAAGCAAATATATTAATATAAATACGACACC
AATTACACCTGATGTCCACCAATATAATATTAAGAGCTAGTCAAGACATCAAGTATGCAC
ACAACCAAATTATTGCAAAAGCAAAAAAGAGCGATCAATAGTTGCAACAAACCTCAGCAT
CAGCCAACGATGATGGCAATCAAGAGCGATCAAGAGGTATTTGTCGAATTCGGGGTGACC
TCGGCGAGTTGGGAGTGGACGATCTAGATGGTTGTATCTAATCTAGTGGCCTCCGATCGA
AGATGTCCTTGCTCCATTGGGTGGTGGCCTACTTATTGATTCCTTAGTCGATTGGTTCAT
AAGTCTTCATGTTCGCTCCGGATTGCTCACAGCCTTGACGCCCGTCGGGTAATAAAGTCA
CGGGTGGCACATTTGTAGAAGTCGATGCACCGGGCGTGGTCCCCTTTTGTTGTTTCATCC
TGGATTTGGGAGGCCTAAACTCGACACGCGGGGTATGGAAAATTGGGTAATTCCACTTCC
CCTCGACAAATTTCACTCAATGGACGTTCAAGTACAATCCATTACCATGGATGTGAAAGC
CATCAAGACATGGATTGAATACAAAAATTTTACACACTCCACTGATGATGATGACTATGA
GTTGGCTCCTAGAGCTCACCAGTCTCCATCACCTCCTCCAACGGTTACATCTTCTTCATT
GACCACATCGAAACCGCCAACATCGATAGATCCAGCACATCTTCTATTGTCATGGAGACC
AAAGCCATGACTTTCTTTCGGACTCCCTCCCTGACTGTCGACACCGACACTACCTCCAAG
GCCACTTCAAGTCTATCTACCAATCAAGCTTAGTTTAGTTAGACATTACTATTCTCCCTT
TTTGATGTCTTGATGCCAAAGGGGGAGACATGGTAGTTGTAGACTAGCTTTGCGCTCTTA
GAAAATGAGTCTTTCCAGGGGGAGAGTTGGTTTCATGTTTATGTTGTTGAGTTACAAGTG
TTGTTGCTTCATTTCATTCTTCTAACTTGTAAACTCTTATGTCTCATGTATAACGTGAAT
TGTAAGCTACTTTGCACTTCTGATTTACTGCATCTTTTGAGGTCATTAACATATGTGTTG
TGTCCATTGTTTTTTGCGCATTAGAGAGCATATCTACATTCATATACACACTATGCCCTC
CCACATATTCTATGATGTAGAGAGTTTCTCACATACCCAAATGACTGTGCATTTGCATTC
GAAAGAAAATTTGTAATAATGCATAAATTTGCACGATAGAGAGTACACCATGTGTTTTTA
CAAGTGTTGCACACTTATTCAATATCTTTTGCGAAGCTTTAATCAATGTTGTTAGGAATC
ACCAAAAAAGAGGAGACATTTTGTACATTTTGTAATAGGTTGGTTTGCACTTCACGGAGC
CTCATGGAGACATAACCGAGACCTTCCTAGGCTTGAATCTTTATTGTTCAAAGCCTTAGT
TGCAAGAGAAACATCGTGAAGCGTCCATGTTCACCCTGTTTGCCTTAGTTGCAAATTTGT
ATGCAGCTTGTTACTCTTTCAAGTGTAGGGTTCTAGACAACCACTAATAAGCTTAAGATT
GTTGTTGACTAAATTTTAGTTAGGGTCCTAGGTTCTGCGTCGAGAATGAAGCAGCCAGGG
TTCTATTTACCTACATTGATGCGAGACACCCTACAAGCATAGACGAATCAAATAAGATTG
CAAGTCATGTCCACGCTATGACATACAGAAACTAGTTTTCCTAACGACACAACAGCAGAT
TTACAAAGGAGAAAAGAAGTTTCTCATTCATGAATGCTGCAGAACAAAAAAATTACACAG
CCAGAAAAGGAATGCCACCGAAATGAGAACTGGTGCAATTAGTCACACAGATAGCACATG
CAAAAAAAGAAGTGCAGAATTAAATTTACCCGAAACAATTGGGGGTTGTTCCCACAAATT
TTTGCGCTGAAGAACCCACAGGTCATTGTTAATGGAAGTCATATCTGATATATATGTACA
CACACACACACACAGCTGTATGGTGTAATCAGTAATTACACAAAAAGAAAGGCATATATA
CAGTACTTATCATGGCAAGCTAGGAGGGGAAAGAGATGGCTTGGTCACTTTCAGCTCCCC
GCAACCGCTGATATACACGGTTTTCTGTGGGCGATCCCACATGGCTCTAGCAGATTGAGC
TCTTTCATCACCAATCAGTTGTGCAAAATCGTTGAATAATTGGATCCTTTCACCTGGTTT
ATAGGTAGGGATGGTTGCAATGCTGGTGATAACGTCCATTCCTACATGATCAATGAAGCC
AACATCAGAACAAAGGGTAAATAAACTTGGTTGGACCAATTATTTAATACATCATTCTCT
TCCCAACAGACAAGTTGCTTCCATTTTTCTACTGTCACTAATAATAAGAAGGACCAGGCA
GTTCATAAAAGAGCATATAATATTGTAGGGGGTACTCGAAATGGTGGAGCATTTCAGAAG
TTCTACAAAATTGCAAAGAATGCATGTCCAGTAAGGGAAAAGATTGACAATTGCATGTAA
TAGGTAACATACACCAACCAACTTAATTGTCAGATATTTTTAAGAAAACAAATATGTGCC
TTTGCTGTGAATATGCCATGTAAGCAGCTGAGCCTGAGCTCAGAGTAGGATTTTCGATGT
AAGCATATACTATTACTAGCAGATAAGAGATATGAACTGTCTCCGAAACAGTCTCTTCAG
CACTTCAGAAGTTATAAGTAACTGTAGAAATAAAAACACCTGAAAGTAAATTAACTCACA
CTTTGAGCGGTGAAGAAAAGATTCAAGCAAGCAGGCAACATTGCACTTGCATAACTGCAG
GGAACATGGGAGTTGGCTGGGATGGGGTTTGTGGACCGGAGGCAGTAAGTTTAAGAATAC
TATAGAACTAGATATGTCTTCAAAAGTATTTGAATAAAAAGAGATGTCTTCATTTAGCCA
ACCAAAATCAGATTATTTTTGGGCAATGTAATCAGTTGTGTTATTTTGTTTCGAGAAAAC
ACAGAAGCCTTGTGTCTCGATGTATTGATAGAAAGAAGAGTTTGTACAAGTCCAAAGATG
AGCGACACCCGAAATTACAACACAACGGCACTAAACTTTACGCACCGCCCTGCTGGTAGC
AATCCCCCCAGACCCCACCCCCCCCCCCCACCCCCCTCCACCTCACCCCCCCCCCC