Contig Data
morexGenes
Links



Map Locations of contig_1558443 (4335 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1558443

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10109 2 1177 bp AK249835.1 Available Available None





CDS Structure of MLOC_10109






Contig Sequence (4335 bp)

>contig_1558443 4335 assembly3_WGSMorex_rbca.fasta
TCAATGCAATGAAACGCAAAGGCTTTCGCGTTTTCTCGAAAAAATTATTCGCGATGCTCA
AAACTATTCATCGCCGAACCTAGGCTCCTAGACTATTGGTGACTGGTGGTGGACCAATTA
GTCCCCTAGGGCAGTTTTGGAAGGTGGTTCTGAGAACATAAATGGTGGTACTGCCACATG
GGCTACCACGTCACCAGACTGTGTCCATGTGGCTCGCGTCTCATATTCTTCTTCCTCCAC
CTTTTCCTCATGTCCCCATATGAATCCCACTCCCAATTTCCTCATTGTTTGCAGCATCCA
AACCTCTTCTCCCACACAGACTTTTGTGGCTATTGTCTTTTGTCGCTCGTCGACATGGAC
ACAAGTGTCACTAGACCACCGTCACTACACCACAGCCTGAGCCACTACCAGTCCCCACAA
CTCGCTGCTGCCAGAGTGCTACCACTATCTTGTTTCATTTTGCCGCGCCACCACTCTGTT
GGAGGGCACATGCTTCCTATATGGTTCTTAATTTTGTATGTGATTTGCTGGGTGTGTGTC
TGATACACCTTGCAGGGATCCCAAACAAAGCTCATGTTTACAGAGAAGGTGTTTAAGGGG
GATGCATTTCCTTCCACTGACTCGTTCATAAATCTACAGAAAATAGTTGCTTTTCCTGAG
CAATGATTGACTGGACAGCTCGAGTTGGGATATGATTATTTGAATTAACTGTTTCCATAC
CCCATTTGAGTGTACTAATTAGGCTCCTTTGGATCTGTTCTGCACATCACCCACATGTAT
GAACTTGGGGGTCTTAAGGGGAAGGAGCCAACACGACAAAAAGATTGATGGGGGCACAAC
TGGGAAGAGGTGACCAACAGGCTTGGGGCACAACAGCCACACGGCAAAGCAGGGGAGCAC
ATCGCGTGCAGAAGTTGATGGATGGAGAGAGAGTGTCAAGGAGGAAGAAGGTGAGGTGGC
TTCCACGCATGCAAAACCAGGTATATGTCTTCCATGTTATACTGCGTATGAAAAAAACCG
CCGGGCAAAAATGATCTGGAATAAGATGTCTAGGGAGTTAAGTGGGACAAAGACTAGTCC
AGGTGGTTATTAGGTGAGCCTACCCAATAGTTGGGGTAAAGTGGTGTTTCCCCTTGTATT
TATAGAAATTTCACATCTGTGCTCCTTGCAGTTTCCAGTAGAATAACTGGCCATTAAGCA
GAACAAAAGTCAATATTCACTCTAAACACAAATGGTCACTGTCACTGTGTCGTTCTTGAT
CAAGGGTGTGGAAGCCATTACTATTGTATCTGATGTATGCCAGAAAAAAGAAATTAGTTA
CTTGAAAGATCACCTCTGGTTGCTCGGCCTCAGGAGGTCGCTCTTGAAACTGGACACTAG
GAGCATGCCGGAGTTTTGTAAGATTTTCGAGAAGTCTTGATCTTATTTCATCCAATTGCC
GGTGGGTGTTTTTATTCTCCATATTACTTGGTGCAACATGAAGAGTATAATCTGGACCAA
AATACTCATAATACTCATTTAGCGGCATCTTGTCAGTTAGCTCATGACCAAGTGCAACTC
CTGTCTGCGCAACAAAAGGGCAAAAAAGGAACATCAGTAATTAAGTTGGTGAAAACTGAA
TTAGCATATGTGCAGAAAAGGCAATAGAACCCCCAAATACTTAAAAATACATCTCTGTTG
CTCATAAGTTGTATATTACTTTACAATTTTCCTAATAAATAATCAAAATGTACATAGACG
GATAAGTAAAACGAAAGGAGTTCATCTTTGAAGAAATAAGCATTATATGTGCCATGCATT
ACAAAAATAGGAACCTATTTATTATTGAACAGAAAATAAAAATAGTACTAGTGTAAAAAA
TGGCATTACAAGCATTTTTAAAAAATCAGAAATAACTAAACCAATACAATACGAAAAATA
CAGTCCGGTGGTTGAGCATGGTATGTACTCTAGATTCTACAGAGTTCCATGATTTTAACC
AACATTTTTACACTGTTTCATCCAAAAATGCATGGTCTATACCTTATTTCTATTATTCTA
TGTACTATCAAGCCCTGTCAGTGGTAGTGTAATACATACGGCCACTGGCATCCTAAATCT
CGGGCTCTACCACCGTCTACAAAACTTGAGAAAGTAGTAGCAATTAATGTTTTATTATTT
TAGGAAAAAACTATCATGGCTCCCTGGCAACATAAAAAGAACCTATAGCAGAAACTATTC
AACTTTGTACTATGCAGTACAGTTTACAATTTTAGAATTATGCTATTTTAAGTATTTGAA
ATAGCATAATTTACATTTAAAAATATGAAAAGCAGATTTTATATGGCAGCATGTTGAGAA
ACCAAAACAACGACAGAGCCCCTGTAGCACACAGTTCAAGGCATGTTTGGTTGCCTTCCA
CACTGGCACACTACCACACTTATGTGCCCCAAGTGTGGCAAGCTACAGTTTTAGAGGCGG
CCAAATTGATCACCACACTAGTGGCAAAAGTAGGCTACCAAATGTGTATGAAAACCAACA
GGTACGATAAAAGGCTATGAAATTGTGGAACGCCATTACTGGCTGACTGGCTGCAACCAA
ACACCTGCCGAACTTGCCTGCTTAATGTTTGGCAAGGTGTGGCTGCAAACCAATCAGAAA
TGTGTTCTGCAAAATGAAGGTGTGATCCTAAACCAAGAAACGCCATTACATGTAGGAATA
GGGTGGCGTAACCACAAATCATACAGTGTGTGCTTTAGGCAGATGGAAGCAGTAGTATAT
CCTTACAATTTCTTGAGAGTGAAATATGACCGAATGCTTTAGGCCATGTTAGGAAGAGTA
GTATTTTTTTTGTAAAGTTTCGCAATTTAGTTCAAATTTGACATGAAGACCAAAACCTCT
CCATGAAATACCATTATTCCCAACAGCCACTTTCAGAAAAGTACAGGTGTAGAACACATG
AGCTTATAGTTTTCCCTTTTCAAAGAATCAGAGACCTACATCATATACACCTACGTATTG
AAAGAAAGCTTTGTGGATACGATGATAACGTACATGAAAAGGCATAAGACATTTCTTAGC
ATAATAACGGCTGTTACGGACATTCACATATTAACAAAATAGCGACATACTTTGTTTGCA
CTAGTAACATATGTTACAAGAGAAGTGGGTTTGTGTCCATGATAGATCATATACATGGGT
AGGTGCTGATGCTACAGAATAAAAAAATTATTTCACGCAATCGGATATTCTAAACGCAAT
TAATTAGAAAAAAACACTGGAATGGGTAGAATAATGCACAACAGAAGCTCTACAAAGATG
TGTTTTAGATGAAAATTCCCTTTTACATACCTCATAGCACCAACACCGTGCAACGTTTCT
TATGGTATAACCACCACCACCAAGCAGCAACACCGGAACATTGAAGGACCTCATGAATCT
CACGCACTCCGCGTGCCCCTTAATGGATAGGTTGAAGCAGCCCAACCTGTCACCTGATAA
AGAATCTGCTCCACACTGAAGCACCACCGCGCCGGGGCGGAAAATCTCCATAACCTTAGC
CATGATCGGCTTGAACAAGGATTGATAGCTCTCGTCGTCGATGCCGTCATCCAACGGGAC
ATTCAGGGAGTAATACTTCCCCTTGGAGTGCCCAACGTCACGAATGTCTCCTGTCCCTGG
GAAATAATCCCCAAACTTGTGGAATGAGACCGTCATCACCCTGTCCGTGGTGTAAAACGC
CTCCTCCACGCCGTCCCCATGGTGGATATCGATATCGACATACAGAACACGCTGTAAACG
CGAATTATTAATTAACATGTTAAGATAACACAATTTTGCAGAATTGAGGGGAACAAGGGT
GGTAGATTAGATACGATGGCACATACCTGGTGGTATTTGAGGAGCTCGAGGATGGCGAGG
ACGATGTCGTTGACGTAGCAGAAGCCGGAGGCCTCGCACTTCTTGGCGTGGTGGAGGCCG
CCGGCCCAGTTGATTGCGATGTCGTGGCCGTGGTTGAGCTTGACGGCGCCCCCGACGGAG
CCGCCGGCGTAGGTCTGGCAGAAGCTGTAGAGGCCGTCGAAGACGGGGCAGTCCTCGCCG
ACGTTGAAGCGCTTGAGCGCGCGGATCTGGTCCTGCTGCGTCTCCGGGGTGACGGAGCGG
AGGAAGGAGACGTAGTCGTCGGCGTGGAAGCGGCAGAGGTCGCGGTCGCGGGCGGGGTGC
GGCTTGAGCACCTGCATCTCGTCGAGGAGGCCGTAGTGGGCGAGCAGGGCGTGGGTCATG
CGGATGCGGTGCGGCTTCATCGGGTGGCCCTGCCCGTAGTAGTAGTTGCCCACCTCCGCG
TCGTAGAAGTAGCAG