Contig Data
morexGenes
Links



Map Locations of contig_1558320 (5335 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1558320

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10050 3 1757 bp MLOC_10050.1 Available Available LOC_Os10g40700.1, FRAME:+3, EVALUE:8e-145, 13110.m03773 protein expansin precursor, putative, expressed





CDS Structure of MLOC_10050






Contig Sequence (5335 bp)

>contig_1558320 5335 assembly3_WGSMorex_rbca.fasta
AACCGGGACTAATGAGATGAACCGAACCGGGGCCAATGCCCTAGCAAACTGAACCGGGAC
CAATGTCTGGCATTTGTCTCGGTTTTAATTTGAACCGGGGCTAATGGTCTTTTGTGCTCC
GGCCGAAAGACCCATTTTCTACTAGTGCAACTTGCTAATCGTCCCGTGACCATGACGGAG
CTCCTAGTGAAGATTCGTGTTTAGTTGCACTAGTTGATTGTGGATGCTCCTGAGTTGTGT
AGTGTTCTCGGTACGCACGTCGGTTTGCGCTTTAGGCCGCTTGCAAAGTTCAAGTATTGC
AATCCCTCAACGGCACCCCACATCTACAAATGTCTTTCATGACGATGGTTTTCTGTCTAC
TAGCTTGGTGTGCCCTGTTTGGGCATTGCTTTTCGTCCCTACCTATACAGTTTTTGGCTT
GGTTTTCCTTATAAACCGGGTCAATTTGTTTAGGTTTTTGATTCAGTTTTCCTTATAAAC
TGGATCAACCACTGTTTAGGAAGAAACTCTTGCCTTGACAGCTTTTTGAGCAATATATTC
ACGTGGCGATTCTCTCCCTCCTTCTCTGGTGACCTTTCAAGAAAAAAAATCCTGCTTAAC
TAGTCCAGTTCGGCCTTGCAAGCCAGTGAGACGGTCTCCTATCATGACGAGTCTAAATCC
TTGGCCTATTATCAATTTGGACCGCTCCCGCACTTTCAACTCATTATGTCTTCTTTCGGT
ACACAGGCAGGTACTACAGGAATGTTGACAGTGTGGTTGGAAGAAGAAGATGACTCCGAA
GCCGTTGGATCAACATGTTACGGCGGAGAGCAATTGACTGGAAAAAAAAAATCGCATATC
ATATTATGGCTCGATTTTCTAAAGTAATACGTATGAATTTGAGAGTGGCCATCCAGAGGA
TCAATCGATGCGACGATGAATTATCAGTCTAGAGATGCTGGGTTATACGATGATTGCCTC
CAGAGTTCCATTGGTTCGAGACTATAGTTTCCGTGCATTGTGATCGACCTGGCGCTGGCG
GGGGCGATGGTGGGTCGTTCCTGTGGTTTCCCACCGCATGTGCTGGGATCAACAACCGCG
CGCGTTCTCAGCTAATCCACACCGAGTTGCCCATCTCAATCGAAACCAGGACCCCAAAGA
GGGAGAGATTATTATTCGATAAATCATTGGCCGGTACGCACCTGTCCACACCAAGCGTAA
CATGGCATAGCGGCCGAGATGTGATTTTATAATAGCGATGCTCGTGAACCGAAGCCTCCA
ATCCCCCATGATTTCCTCCCAACCCCATGTGAGCATACGACCAGTGAGGCACGCACCTAG
CGCCTAGCGCCACGGCCCGTCCGGTGCAGTGCAACGGCCGTTGCCGATGGTGGGGTGGGT
GACGACGCCGGTCGAATCGCCCGCCCGTCCCGCGGCCGTTTTGCCTGCCTATAAATAGTC
CGGCAAAGGTCCTTCCCTTGGACCATCAAGACACAAACCAGAGTCCACAGCAGAGCAACA
CTACTACCACCCCCCAGTGGCAAATACAGCATAGCGACAAGGCTCTAGCAGCTTAGCAGC
TGAAGATGGCCGGGGTACTCTCTGTCAAGGCCGTCGCGCTCGCCGCCGTGCTTGCTGCCG
CGTATGTCTCCTCGGCGGCGGCGGTGAACCTCAACACCTCCGCCGTGTCTTACAGCTCCG
CGTGGCTCCCGGCCAGAGCGACCTGGTACGGAGCGCCCAACGGCGCCGGGCCCGACGACA
ACGGTACGTGCCTGCCGTGCCGTGTGGATGCTTGATGCAGCGATGCTCTCCGTCCGTTCT
AATCTAATGTCGTTGCTCAATTTGGTTCATCGGTGTGCATGCATGCAGGCGGCGCTTGCG
GCTTCAAGCACGTGAACCAGTACCCCTTCTCCTCCATGACCTCCTGCGGCAACCAGCCCC
TGTTCAAGGACGGCAAGGGCTGCGGCTCCTGCTACCAGGTACTACTTTACTGCCATAGAT
GAGCTTACATTCCTTTTCCCTGGACCTTGGTGAGAGTGAGACGATGGAATACAGTACACT
GCACTACGTACATACACTTGGTTTGGTGATAGTATCAGTTGGTATCACAGTGTGTTGAGA
CTTGGTTGACCATGCATCCTGGCTTGTGCTTTCAGATACGATGCAGCGGCGACCGCTCCT
GCTCCGGCAACATCGAGACGGTGATGATCACCGACATGAACTACTACCCGGTCGCCCAGT
ACCACTTTGACCTGAGCGGCACGGCCTTCGGCGCCCTGGCCAAGTCGGGCCTCAACGAGA
AGCTCCGCCACTCGGGCATCATCGACATCCAGTTCAGGAGGGTGCCGTGCAACTTCCCCG
GCCTCAAGATCAACTTCCACGTGGTGGAGGGCTCCAACGCGGTGTACCTGGCGGTGCTGA
TCGAGTACGAGGACATGGACGGCGACGTGATCCAGGTGGACATGAAGGAGGCCAACTCGG
GGTCGTGGATGGCGATGCGCGAGTCGTGGGGATCCATCTGGCGGATGGACTCCAACCACC
GCCTCCAGGGGCCTTTCTCCATGCGCATCACCAGCGACTCCGGCAAGAAGCTGGTGGCCA
ACAATGTCATCCCGGCCAACTGGAGGCCCAACACCGACTACCGCTCCTTCGTCCAGTTCA
GTTGATTGGCCCCGACCGGCCCATGAGCGGCCACGTGCGCCTGCATCATGCACGCATGCA
TGCATGCATGCGCTCTGGCCCCTCTGCTGGTTGCAGTTCATCACTCGGTTGATCGAAATC
ATTTGCCTTATTTTATTTTTTGTATTTTGCGTGGGATCACGGAGCTTGAGATGCCGTCTG
TCTGGTGTCATATGTGGGGTCGTCGTCTAGCGTCGTGAACATGTGTGGGAAATGTAGGAA
GCATGGTTTGCATGTGCTCTCCCGCCCACTGACTCTGTGTACGGTGTACCATGCATAACA
TGGCACTACCTGTGTGTAACCAAAATACCAAATCAAAGTTATAAATTATACTATACGTAC
AGTTTGTTCTAGTACTACTTATTTCTCTGAGTCTCTTTTTATCAGCTCCCGCTTTTTCTC
TAAACGAGGCTAAAGCTTTGACATTTCATCAAGGAGAAAAAAGTCTGTATACGTAAAGAC
ACGGGCCATAGCCAGTTAGAGCATCTCCAATAGCTTTGTTTATATGAACGTCTATATTTG
TTTTTAAAACCTAAAACAGGGGTCAAGCAACTTGCCTATATGATCGTTCAAATATGCATA
ATTTTTAAATAGACCTCCACAATGTCCACGCGTGGACAACGTCAAGACGTCGTCCAAACT
CATCTACAGCCATGATTCCTCCCTTTCCTGAGCGGCGGCCCACCGGTCATGGTCCTTATA
TATAGACGTTTTGATGCAAAACCAAACGTGTATATGAGAGAATATTTTTCAAACATTGTC
CGTATGAATATATAGACATCTAAATATACACATGCTATTGGAGATGTGCCCTTACTCTCC
TAGCATTGCAACTCTAACATGATTTTCTCCGGCTTTGACATAAAGGGATGAGTTTTTCTT
GATGTTGGAGAGGATATTTGTAGGTATTTGTAGAGATATGTCAAAAGATTCTAGCATTGC
GCTCGTTTCAAAATTGTCAAGAGGCGAGCATTTGAATCGATGGGGTACATTTAGACGCTC
TATCATTGCGGTAAGATACCGCCTCCCACCATTCTAGAATGGAAGTCGTGGCTGCGTTAA
GAAAGGGGACGAGATTATGCCATCCAACTCAATCATTCACCATATTCCAAATACAGACCG
AGTATCGTCAACTGTTTTCTAAATAGAGATTAAAAAAATATCTAGTTCATTAGTTAAGAA
AAGAATCGAGTATCGACATTTGAAGACAAGTGAGCCGCCATCTCCTGCTCACTTGCTTGC
ATTTTCACAATGACACATCGAAGTTGTATATTGTGAAACAAAGGGAGTATGTTGTATCGT
ACCCGCGTATAACGCAGGTAAAATTCATTGTTTTGACTTTTTTGAAAAGATAAGTTGGAC
CTGACCCCGGCTGAGAATTTTTTTTGGATCTGACCCTTTTGCTACCGCCAGAGACTTTAT
CAATAGGATATAACAGCCTATCACCGAGGGCCCTGACGGTAGGGTTACAGGCCTAGCGTA
AACATATCTGTAAGTAGCGGACACAGTGCGCGTGAGTGCCTACAGCCGAACCCTTTGACG
GTAGGGTCACATGCGCTACCGCCAGCCTCTTTGGTGGTAGGCCATTTTCCTACGGCCAAG
GGCTCTGGCGGTAGCAAAAGGGTTCGATCCGGAAAAAAATTCCAACCGGGATCAAATTCG
GCTTAACTTTTTAAAAAAGGTCAAAACTGTAAAATTTACCTATAACGGATGAGCTGACTC
CAAGATTCTGGTGTTCCCTCCATGGCTCCATTCATGGACTTCAAGCGATGCAATGATGTA
GCGGTCAGGCGGCCCAGAGTAGTTTACAGGTTAACAATGAGGCTTGCTACTTTAGTACTC
CTACAGTACAAGCGGATCTGCAGCTGATATTGTGATAAACAGTACGATAGCTTTTCAGAA
CAGTGCCAACCATCAGTCCGAGTAAAGAGTGCACAAAAGGCTCAATTAGTTTTCATTCTC
TGGTCTGCCCCATCCACAAAAGCATCACCATAATCATCACGAGCACCAAAGCGAGCTCAC
TTAACTATTTTCTAATCAGTGATTAGTGCAGCCAACAAACGTATAAAGCTTATCATTATA
ACCGTCAGTCTTAGCTGTGTAGGAGTGCTCTTTTTGCGACAATGAGTAGAGTAGTCTGCA
AATGTTAATGGGTGATTTCTCCCTTTTATGAGAAAGTTGGCAACGGCTGCACACCAAGGC
AAGGCAAGATAAAATACACGCTCCCATCCAAGATGGTTCCTCATGGATTTTGGGCGTCTG
TCATCTCTCCTACCGTTGGCTCCACAACCCAGCCTAATATGATGTTGCAATCTGCTCTTG
CTGACCACACCGTATTGCTACAGGGTTGGATGATGCAGGCTGAAAGCTTTTTGAAGAGAA
GAGAGGCCCGCTGTTGTGCCGACTATGTTGCCGACCACTCGGACGTTCATGCCTCCAAGT
GTGGCTGCTATTGCCTTCACGAAGAAAGGGATACTAGTAAAAAAATGGTCTTTTGTCCCG
GTTCGTAAGGGTCTTCTGTCCCGGTTTTAAAATCTGGACTAAAAGGTCGTTACTAATGCC
CTTGGCCTTTAGTTCCGGTTCTTACACCAACCGGGACAGATGGGCCTCCACGTGGTCAAT
GCGGCAAGCCCGGCCAGGGGGGTCTTTAGTCCCGGTTGGTGACACCAACCGGGAC