Contig Data
morexGenes
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Map Locations of contig_1558269 (2621 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1558269

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10028 5 1399 bp MLOC_10028.1 Available Available LOC_Os04g53490.1, FRAME:+2, EVALUE:6e-172, 13104.m05507 protein OsCHL Chloroplastic lipocalin, expressed





CDS Structure of MLOC_10028






Contig Sequence (2621 bp)

>contig_1558269 2621 assembly3_WGSMorex_rbca.fasta
TATAAGTGATAAAAAATATTCATGATTTTAAATATGTTCATGATTTTTAGAAAATGTTAT
GATTTTTAAATTGTTTATGATTTCACCAAATTAAGCGAAAAAAATCCGTTGCAACGTACG
GGTCTTTTGCTAGTGTAATTTAATCTTAACAATTTGGACGGGCCACTCACTGGGCTCGTT
ACACACACGGAGAGGGCCTGGCGGGCCCGGCGTTGGAGCGGACGTGGGGGCTGCCCATTG
GGCGGCACCGGATGACGACGATGCTCTGCTCCCCCGGCGGACTCGCACCGTCCACCGTCC
GTCGTCCCCGAGCAAAGCTGCCAGCGCCACCTGCCCACATCATGGTGGGAAAAAGGAAAC
CCACCGCGAAGCCAACCCCAACAAAGCGTCCCCCTCCGTCGACAGCGCGGAGGACCCGAC
GCCGACGCCGGGAGCCATGGCCCTCCTGCCACTTGTGGGCTTTCCCTCCTTCCCGTTCCC
GGCCTGCCCATCCAGGTACTTGTGGTGCAGAAATGTCGATTCCTCCTGCTGATTATGGTT
GATTTCTTCCTGTCAAGTGTTGGATCCGCCGCTGCACTGCTCTCTTCTCCGTTGATTTGG
TAGAGGCTTCGGGTGTTGCTTCTTTGGCAGGAGAACATGTGGCCCTGCTTCGCGCATGAA
CTTCAGATGCTGCGTGCAAGAGAGAGTGCCGACGGTGAGGAACGACGGGATATCCAAGCA
TTTGCTCTCCTGCCTCGCTGCTTCCCTCGTCTTCATCTCTACACCTAGCCAGGTACCTCC
ATCTATCAACTTGTCACCCATAGATCCACTTGAACTAATTCAGAAGGGAAATCTGCTTTG
CCATTGCGAAATTATCCATTTCAGCAAGAAAATGGTTGATTCATATGGATGGACAGAAGA
AAAAAAAACAGAGATACTCCGTAGTTAGTACGGCTGCCAGTTGAGACCTGCGACAAAGGT
ATCGATGCGCTCTTCTTGTTGACCAGGCTGTTCCTGCAGACACCTTTGCCCGGCCGAGCT
TGTGCCAGGTTGCGGTGGTGGCCGCCATCGACAAAGCCGCTGTTCCTTTGAAATTCGACG
GCCCTTCTGAAGATGGGATGATGATGATGACCAAGGGCATGACTGCCAAGAACTTCGATC
CTGTTCGCTACTCCGGTAGGTGGTTCGAGGTAGCATCGCTCAAACGCGGGTTTGCTGGTC
AGGGACAAGAAGACTGCCATTGTACTCAGGTACTGCAATGACAGCAGCCTCATACTGAAC
TATCTGAATCTTTTTGTTGTTGCTGAGGAAGACAGAATAGTATGTATTGATATGTCTGAA
AAATATATTTCTCATCTCCGTATTGAACTGAATTGTCGTAAGCAGGCTATTTTCGTCATA
TGATCAGAGAGTTGCTGCTGCTGCAGGGAGTGTATACATTTGATGAGAAGGCGGGCGCGA
TCAAGGTGGAGACATTCTGTGTCCATGGCTCACCCGATGGATACATCACCGGTATCCGGG
GGAAGGTGCAATGCCTGTCTCAAGAGGACATGGCTAGTGCCGAGACTGATCTCGAGAAGG
AGGAGATGATCAGCAGCAAGTGCTTTCTGCGATTCCCGACACTCCCGTTCATACCCAAGC
TACCCTATGATGTCCTAGCAACTGACTATGACAATTACGCCGTTGTGTCTGGAGCGAAGG
ACACAAGCTTTATTCAGGTGGGGAACTATAAACTACTCATGTCTAACCATCTTGAGAACA
TATAGCCATCTTAATGTAGATTCTACAGTGTAGTACTTTGTGTTGTTGAGTCACTTAAGT
ATCTGATGCACTCGGAATCTGATGATCTGTGTCTGGTACTGAATCAGATATACTCAAGAA
CACCAAATCCCGGACCGGAGTTCATCGAGAAGTACAAGTCATATGCTGCCGGCTTCGGCT
ACGACCCGAGCAAGATCAAGGACACGCCGCAGGACTGCGAGGTGTCCTCGGACCAGCTAG
CGCAGATGATGTCTATGCCCGGGATGGACGAGGCCCTGACAAACCAGTTCCCGGACCTGA
AGCTCAAGTCGTCGGTCGCGTTCGACCCGTTCACGAGCGTGACCCAGACCCTGAAGAAGC
TCGCCGAAGTGTATTTCAAGTAAACACAAACTCATCCGCGGTTCCACTGATCGATGTTTC
CTTCTTCACGCCGAAGCTGCACTTTTTTTGATAAATAAAAATACCCAAATGCTAGAAAGT
GTTGATTCGTACACACAATCACAGACCGAACAATGCGACAGATCGGTTCCATATTTGGAA
ACTGTCCACACATCCGAAAAATACACTTTGGTTCCTGGTTGCATATGCAACCTATGTGGA
ACCCTAGGGCGTGGGGGCTCCTCCCACCAACCTAGGAGGCAAGCCTCCCTCCTTGGCCGC
CGCCGCCCCCTCCTAGGGCATTTAGGCTGGCCGACCCCCTCTCCCCTTCCCCCTATAAAT
AGATGAGGGGTGAGAGGGCTGCGGGATACCTGAAACCCTTGCCCCTAGCGCAGCCTTTCC
CCCTCATACACCTCCTCCTCCTCCGTAGTGCTTAGCGAAGCTCTGTCGGAGAACCACGAG
CTCCACCGTCATCACGTCGTCGTGTTGCCGAAGCTCTCCCT