Contig Data
morexGenes
Links



Map Locations of contig_1558082 (6497 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1558082

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_9930 4 2163 bp MLOC_9930.3 Available Available LOC_Os07g04180.1, FRAME:-3, EVALUE:0.0, 13107.m00356 protein amino acid transporter, putative, expressed





CDS Structure of MLOC_9930






Contig Sequence (6497 bp)

>contig_1558082 6497 assembly3_WGSMorex_rbca.fasta
TATTCAAAGGTATGAAGATGCTCTTCCCTCTTGCTCGTTGTTGATGTCTTCATAGATAGA
TCCTTGTATGGCGTAGGAACATTTTAAATTTACTGCGTTCCCCAACATCTGGTTGGGCGC
GACACCGAAGCAGGAGGCCACCTGCCTCCAGCACTGGAGGGCGCTGCACCTGGCGGAGAA
GCGCGCCGACGCCGCACGACAAATGAAGCTGGAGCGGGAGGTGTAGGAGGAATGGTTGGA
GATGGAGGAGGAGGAGCGCACTCGTGCTGTGCTGCCACCGCCACCAGCATAATCCGCGTC
GGCGGGACGAACGATGGAGGCACACGCAGGGACGCTCTAGAACACGGCGTTTTCCTGGGT
CGGCCCTTCGTCGACGCTGATTGACCTCACGGGCCCCGACTTAGATGCCGAGGACGCGTG
GGGCAGCGCGTTGTCTCATATTTTACCTTTTTATGTTTAATTAATGTAATGGGAACGCGT
TGACTCTCGTCGGCCTTCGTGGCTGGCTTTTATGTTTAATTAATGTTTGTTTTTATTTTT
AAGAATGGTTGTATATTTTTTCGCGTGTCGTAAAATGGGTCCGGCCAGCGTTGGGTGCAT
GCGCCGATCCAAACGCGGAAGCGGACGTTCTTGTCCGCCGGGCCGATCCAAACACACAAA
AAGCGGACAAATGTGTCATCCGTTTGGGTCGCACCGTTGGAGTTGCTCTAAGAGCATCTA
CAACCACAGTTTGTAAATCCGGGCAATCAACGTCCTCGAATGGCGTCCGGATTCGTCTGT
GGATACTAACCGGTTAGTCCTCAAATCTGATCGTCCACATTCGAGACTTTCATATTTGAT
TCGCCAGATCCATAAAAAACATGTAAGAGAAAACACTACATACTATGTACTACCTTAGTT
TTCGTCGTCAGAGATGTCCATGACGCCGGTGCCGGGTGTGTGGGAGGACTCCAGCTCTTT
GTCCTCCTGCTTGAGCTCATCCTGGTCGGCGAACATCTGCGCCTCATGTTCAGTCTACGT
CACATCCGCCGCAACCTTCGTCACCTCCATCTCCTGCCGTCGACGATGTGTGGCTTCCGC
ATCCAACTCCGAGCGGATGGAGTTGAGGATGGCATGCTGCTCCGCGCGCAAGTCCGCGTC
ACCAGCGTCCCCTCGTCCTCCTTCTTCTTGTCCTTGCCCTCCTCCTCCTCCTGCGGATCC
ACTACATTCGGAGGTAGCCCCGCCGTGATCCGGGCTTCGTGCCTTGCTTGGACCTGCGTG
GACCTTCTCAAGGAGCTGCACCCGGTGCTCTGGCGCTAGAAAGTGGCATTGACAGCAGGC
CAGGGCGTTGTCGGAGAGTGTGGGAGAGAAGACGGACGAGATCGGGTGGTAGCGTGGAGA
GGGAAAAGGTGGATGTGCTAGGGCTGGGGGATGCCGATCGGATTTTGCCTCTCGCGATGA
GCGACGTTACGCAGTGTTCACACCGCGGCGACGGACGAGTTGTCCGTCAGACCGTCGGGT
CACGGGGGTGTTCGCGTGGGACCTCATCGTTAGGCCGGCATGAAGGGTGTGCCCAGACGC
CCCATATTCGCTCCATATTTGGGTGCATATGAGAGATGTCGATCAGTTCGCGCGTTTGAG
GCCTCCGGCTGGGGTCAACATTTCGTGATGAGGCACTAATAGGGCAGCGTTTGTGAAAAG
TATGAAGGGTTCGGTTGTAGAAGCTCTATTTTTTTTGTAGTGGAGAATAATTGAACAAAT
ATGCACCTTTACAAATTTATAAAAGCACCCCACACATCTTCATGAATATAAAATGCAAAT
CAAGTTGCTGTTTTACGTATGGCACCAGCTCTGTTAATTAATTACGCCGGCAACAAACTT
ACAAAGATGCACTGAACAACACAGTTACACAACCTTTAAAAGCAAAAAAGAAAAAGCAAA
CCCTAAATTTGCAGATCGCACGAGCTTTTGCCAATTTGCAGTGTACTCGGATGGATGGTA
GAGCAGAGAAACAATTATATGTTTTGGCAAGTTGTCTCATGTAGTCCTGTTCTAGCTGTT
GCGTAAAGCGGTACTCTGTTTCATCCCTGAGCTGACATGTTTAGCTGGAATGTCATCCAA
GCACATATTAAAATTGTAGTCAACTGTAAACCTTCTTATTGCTGCTCATATCATATGGCT
TAAGCTTCTGCTACCAATACAGTACTACTAATCAATCTAGGTTTACCACTTATAGATCAA
AGTTTGAAACAGGGATTAACCTGGACCCTTGACCTATAATATGCGTGATCACATCACTAT
GCATGCTGAATACGTATATGTTAGGAGACCTTGAATGGCTTGTACCCTGCCACGTCCTTG
ACGAGCCCCTGCACCGAACCAGCGGCTGCGAGGACAGAGACGACAAGGCAGGCGATGCTA
AGCACGTTCATCCACGTCCACGTCGGCGAGAACCGCCGCACCTTGGCCTGTGCCATGTAC
ATCTCAACGGGGAAGTAGACGGTGAGCGGCCAAAACGAGACGGCGCCGATGAGGCCAAGA
AAGTCGTTGAAGAAGGGGAACAACATGGCCACCACCGCCGTGAGGGCCACGTACGCCGTT
CGCCAGACCAGGCGAAATGGGCTCACGGGGAACTCGCCGCCGCCGACAATGGCCGGGAGT
TGCACGACTCGCTCGGCGTGGAGGAAGGCGCTGTCGGGCCACCGGGAGCGCGCCCAGCCC
TCGACGAACTGGTAGAAGGGCTGGCAGAAGACCTGGTAGGCGCCGACGAGGTGCACGACG
ATGCAGACGTTGCCGACGTCGACGAGCCAGAAGGGCTCGTAGAAGCCGAAGCCCGTGAGG
AAGTTACCCGGGGCGCTGCTGCCGAACGCCGCGTAGCCCAGCACCCCGCACAGCATGTAG
AACGTGGTGGTCGTGGAAACGCCGATCAAGGATGCCTTCTTCATCACCGTGTTCTCCGCC
GGGCTCGACCGCAGCGTGTCCTGCACCAAATGAAATCCTTCAATTATTAGTACTACTCCT
ACTGTTTTGGACTGCAAATAGCGTTCATATTTTTCATCAACAAACGACATTCGCACTGGT
CCCTTGGTTCGCTCTTGAGCATTTCTAGAGCACCGATGTCCTTTTCTGCCTTGGATACTC
TTTGATTGTTCATACCCATGCAGAGCCTGCACCGTGGAGTCTGCACTCGGTTCAGTGCAG
AGCAGAGACCCTCTCGAATTGACTACTGCCTACTACTCTGATCTCATCTGCATAGAGTAG
TAGGAACATGGACTGCTAAGGTTGTCCTCTTGATAGGGTCATAGGGTTCACCCATACCGT
TTTCTTACACAATTTGTCCTCCAACAAGACCCAAGAGGTCACGGAAATGGTCTCACAATT
TCTGAGACGTTTTTTTCTTCCTTTTCTTAAATGAAGCATGGTTTCCAAGAACTACATCAA
TAATTGAGATATCTAGTCATATTAATTTAGGATAGAAACAATCATCTATTTCGATCATAA
GTAACTAGGGTGATATGACAACAGCCCTGTATGTCTAGTGTTTTTTCTTTTTGAAAAGGA
GAAACTTAGCTTCCCGCCTCTGCATCATTCGATCATGCAGCCATTGTATGTCTAGTGTTA
ATTACCTGGATTTCGATGAGAACATTGGAGTAGGAGTATGCAAAGGCGATGTCCCCAAGA
GACTGGAACGTTCTCCAAATTTTCTCACTCGCAGATACATCCACCCCAACGGTCACCCCT
GTTAGCGTTGTCTTGGCATGCACCCCACCTACAACAATCAATCAGTCACCAACGCAACAT
GTGTATACATTGCACCATGGCTGATACCAACAAAAAGATGCATCATGATACATCGACTTG
TCAAATGTCCTTTTGCAGCACCAACAACAAAAATCATATCACCACCATCTCTCTCTCTCT
CTCTCTTTGTTTTCTTCCTTGGGAAATTATGGTTTGTACATTATCTTGTAAGGACCATGT
AGAGAACAAATGTTTTCTTGCACAGGACACACAACGATCAACATCATCTACAAAAATATA
CTAATATCCATTATAGGTTTGCCGAAATCAGCATCCTAAAGTAATTTTACCTGCGATTTT
TGCTATGGAGAGGCCGAGACCAATGGACGAGTAGGCGAGGGACATGACGGCAGCAACAAT
GGAGAGCCACCAGATCTTGTGGAAGTTGGGGAGCTGCGAGAGCAAGATTTGGATGGCAGC
AAATATAATCATGTTGGTGGTGTTGGATGCCTCGCAGGCCGCATTGTGGCCATTGCGGTG
GAAGCAATTGGACCGTCCGATCGCCCTACATGCATGCCTCGCCTTGATGAGATGTCCCGA
CAAGTAATGGAAAAGTAAATCAATCAAAATAAAAAGCCATAACTTAGTAATTTGGAGCCT
CTAGTTATGTGCTTGTCATGCACGACCAATCAATCATTTGCCAGTAGTCACCAATAAGAT
TCTAGTCTTATATTTTTTTTCTTCCGAGTTCTTGCATGATTTTTCTTGTTCTAAGTTCTA
ACCCATGCCAATACAGGCCACTCCTTTTCCAAGATTCTATTTTAAGTCAAAAGTAGTAGT
ATCGGGTCTTCTTTTTTTCAAACCACTTTTGAACTGTCGAGTTATCATGTTTCCAACCTT
TTCTCTGTTTGTTGGATCTGTCGTAATGAAAGAACCTCTCCTTTGACTGGCATAGTGTAG
ATCAACAACCAGAAATGCTCTGATTTTGTTTCATCCAAGAGAGAAGTGAGACTCGAGTTT
ATCTTTCTCTTGAAGAGACAAAACAGACGAGGCGAGCAAAGATGTAATTTAATGAGAATT
TTGTAGGATTCTACTTTTCTAGAATTTCTTTATGTAGTAGTTGCATATTTGGTTTTAGGA
ATATAAAAAAATATGGATTTTATTTATGGTTGACGTTCCATGCACTCCCATAGGAAAAAT
AATAATCATTGAGCCAACCTCATGGATATGTTTTGTCGTGATATTCACAACGATGGCATA
CGCTTAAAAACAATTAGGCTTCGTTCGGTTAATCATGCCACCCCGGGATTAGGGCCAAAA
CCATGGATTTTATACCAAATAACATCTATCACACATTCTCGTCTTCTCAAAAAAATAAAA
ATAAAATAGGAAGCAATATGCCATAAAAACAGGTAAACAAAAGCATGGGCGCAGAACATG
GACATGCATGTACCCAGTGTGGGATGCATGAAAATTGGTTGGAGTGTTTGAGACAACATG
CATGCATGCATGCTTACCCCATGCTGATGGCCGTGGTGATGGTGTAGCCAATGGTCACGC
CAACCAAGTTGAGGTATTGGGCCAGTGAGCAGAGCCTGTACTTGCTAACTCCTGAAAAAT
CACAAGTCATAATACTATTATTAATCACGGGGAAATCAGAAGAGACTAAGAAATTGGTTC
ATGCATCATGTATCTCATAATTAATTATAGAGTACCTAGGTTTGCCCTGACGGCTTGGCC
GTAGGTGTAGTTGCGCTTGCCGTGGACGGGGTCCGGCGAGCGATAGCAGTCGGCCAGTAG
GCTGGAGCAGAACCAGGTGATGACGGAGAAGGCGACGAGCACCGCGGGGCCGATGACCCA
CCCGAGCTGTGCGATGGCCCACGCCAGCGACAGCACCCCGGACCCGATCACCGCCGTGAT
GATGTGTGCGCTGGCCGTCACCAGCGTACCTGCATCACCATGGATCGTTCAACATGTGGG
TTACCATGTGTTTTGCACGCATGCCACCCCCACCGCCTGCAAGATATATAGACTACTATA
CGTAGTTGCCAGGAGGATGCGTGCGTAGAGTACCGGTACGCCTCTCGCGGCCGTCGTCGT
CGATGTCCGTCCGGTCTCCAAAGCCGGCCTCAGCGATGCTGAAGGCGGCAGGGTTAGCCT
TGCTCTTCTCCATCCCCATTGTTACACCTACGTGCTTCTTCACACAAGCACAAGCACAAG
CACACGGACGTAGGTGTGTCTCCTGCGCACCGCTGGTGTTGGTGGGGAGAAACAGAGAGA
GTGGTGTTGGTGGCAAGTGAGGGAGAGGACGCCCTTATGTAAGCGCGCCGGAGAACGGAG
GAGGAAGAGGGATCTGGGACCGTCGGAAGCATGTGGTTTTGGCCTTTCCGACGAGCGGTT
GGGATTTGATGCGGGCCGGGAAGAAAGTGCTGTGCTGTTAGGTAATCCAAAAACGTAAGC
TAGTTTTAACTAGGTAAGTTTTGGTTAGGTGAGTCGAATTATGTCGCGTCTGGCTTGCAT
GCCATCTTGCAATATGTGTGTGTTGATTCATTAGTAGTGTGATCAGCATTGCCGGTGATT
AGTTTAGGCAAGGTTTAGTTCCTGTCCGTGTACAAGGTTGAGTACTACTAGCAAAAGGAC
CCGTGCGTTGCAACGGAAGAAAAATAATTATAATCTCGAATGGTGCTGATCATATTATGT
CTTTAAAATTTTAGGACATTTTTTGAAATGCATGACCATTTTTTAAATTAGCAAACATTT
TTTCAATTGCACTCAAA