Contig Data
morexGenes
Links



Map Locations of contig_1558059 (2704 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1558059

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_9919 1 327 bp None Available Available None
MLOC_9918 1 482 bp MLOC_9918.1 Available Available None





CDS Structure of MLOC_9919






CDS Structure of MLOC_9918






Contig Sequence (2704 bp)

>contig_1558059 2704 assembly3_WGSMorex_rbca.fasta
CGCCCGCCGCATCAGGGGAGAGAGGGCCTAGGGTGCTTCCAGCTCCTGACTTCGTTGCAG
GTGTAGAGTACTCTAGGTTAGCTCCTGAACCCGTGTTGCGTGGTGGAAATCTAGTGTTGT
GGTAGGAAGATTCCTCGTTCGTGCTCTGTTAGGTGTGCTGTGATGTTCTGGTGCACTGTC
TGATGTTACCATCTTGTTGTCATCAGCAATCTGAATGAAAGTTGTTTGTACACCTCAAAA
ATCAACGAATTGTTTCTTTGCTTCATCCATGGTGTTCCTCGAGATTTTCTTGGAATTTAA
GCTGAAAGTCCCAACCAAAGTTTCAGTTTGCTCCATCTAATGTCATGCTTTGGTTGCTCG
TCTGTCATGCTAATGTCACAGTTAGTATGCTTAGAAAGTTAATGGACTCTGGACTGATTT
TTTTGTTTGTTTGACAACTACTGCAACCGAAAGTCTCTGAAATTCCTTGCCGTACTGTCT
ACTGGATATCTTGGTGTTGTTCCCAACAATTATGTTCACTGTATTTCATCACCAGTGTTC
ATTAATCGTCAGTAAAGGTTGTGGGTAGCTTCTGTCTAATGGTACCACTTGCTTCTTGCG
TTTCTGCCGAGATTGATTAGCTTTCAGCTTGCAAAGTAAACACAAGCAAGGCCTTTGCTA
ATCTGTATGCTTGTCTAGTTATGTCTTTGCTAATCTGCCTGGCAACTCGGCAAATAAGGT
CATCCAATCTTTGGAAGACCCCATTTTCCTCTCCTGAATGAACAAGTAAAAGTAATATCA
TGTCATATTTTTCCTGACTATAAACTGCAGTGTAATCGACATGCTTCATCAATTGTTTAG
CTAGTCTTTGATTATCATCCTCAAGCCTAGCACAAGAAAGTCCTACATTTTGTTGTTTTT
TAGATACGTGGGCAGTTGCTTGATAAATGACAGTATGGTGCATCAGATCAAATGGTTTAT
CCATTGGAGAGATTTCTCGCTGAAAACGTTTCCAAAATTATCTGGGTTTCAGCTTCAGTT
AATGTCTTGGCCGTGTGAATTCTCAGCACTATGTTTGGTATTGATCCCCACTAACAATTT
TATTCAAATGTTTGGCTTGTAGTTGTGTTGGAAAAATTGTTTCGAAATTAAAAAATGCGT
ATGGTTATAGCTCCATAGTGTAAAAGATGTGCTCTAGAGGGAGTTTCTTGCAAGGACTTC
ATACTAGATTACTATGGAGGAGACTTTTGTCCTTTATTGCAACAGTAGTCAATTTTTCAT
GGATTATACACAAACAAAATATGCAGGGGTGAACTCTAGCGTCAAACTTTATTAGGTGGG
TGCTTAAGTTGCTATACGATCTCTGAATTTTGAGGTTTAATTATATTCTACCAAAATCTG
TTAAACTTTTCTTTTTGTGCTTTAGTTATAGCTTCTTAGAGTTATAGATTATTCAGTTCG
AGTAAAGTGCAGAAGGCACGCGAGCGCCGCACAAGAACAAGATTTTCACATGATGTGCTT
TATAAGTGATAATCAGTTGATGGGCATCACCTGTGATAAATATCTTAGCCATGCTCAGTT
GTTTGTGTTTGTTCTGCTAGCGCACAGAGGCAACTTGTATCACAGCCTAACACCAGAATA
GTCGGTACTCTCACAACACAATTTTGAACATTTATTTGTTATAACAAAACTATATCTGGA
AGTTTTTTTTTCTGGCATGTATGGAGGTCGAAGGCAGCATAGTGTCTTCTCAAGCAGTCC
TTTGCATCATGAAGTTCCAGCTTCTCATTTCATACCGAGCGTTCATTCCCAACTCCTCCT
ACTATCAAACTAACAATTGGTGATGAATCTGTTGAATCGCAATGACTATGAAGAATGAAG
GCAACACACTTAATCGGTGGTCATAATGAATTGTTTTTTCTATTATGGGACGGAGGGAGT
ACTTGTGTGAAATGTGGTTGCTGGACAATTCTACAACCATTCGACTGAACTAAAAACTAG
CCATCCACAGAGTTTTATAACACAGATGGATACCGATGAAAACACACACTTAATTTCAGA
GAACGTTTCTGCATAAACAACAAAAATAAGAATAACAGGAGGATCACTCCCGGCTCTCAT
CATGAAGTCCATAATCAGGCGCCAAGTACAGCATTCCAACGCCAAGAGTAGTGCCGAAAG
TACTACAGAACAGAATCGTGATGCACCAACGGCAAGCATCAGAGATAAAACTTCTAGGAT
CTGAACAACAGCACCTCTTCAGATGGAGATAGTTGGTGGACACTTTCCCCCCTTGGTGGC
ATAGCTCTTCTCCTGAACTTGAGCAAGCCCTTATGGTAAATTCGTGGACAGACTGTAACA
CGAAAAAGAAACTGAACGAAGGCGGTGGCAAGATTCAGATAGAGAGAACCAACAATACCA
TTGCATTCATATTCATCACATTCCATTGAAGAACTGGATACAGAGTACAGAGACAGACAC
ACACACTCTAACGAACTGACTGCATTCAGATTCATTGCCTTCCACTAACTACACAGGCAC
ATGGAACAACAACGCACGCACTCAGAAACGAAACCATATCACAAGAACAGCAGCAGCAGC
AGCAGCTAGCGGAGTTCACTCGACGGGGCAGCAGGTGCAGGTCAGCCGCCGAAGCCGTAG
AGGGTGCGCCCCTGTCGCTTGAGCGCGTAGACGACGTCCATGGCGGTGACGGTCTTGCGG
CGGG