Contig Data
morexGenes
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Map Locations of contig_1557871 (1198 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1557871

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_9821 2 839 bp MLOC_9821.2 Available Available LOC_Os03g55310.1, FRAME:-2, EVALUE:2e-14, 13103.m06016 protein SWIB/MDM2 domain containing protein, expressed





CDS Structure of MLOC_9821






Contig Sequence (1198 bp)

>contig_1557871 1198 assembly3_WGSMorex_rbca.fasta
CAATGCACCGTAATTTTACGTTCCGTAAATTTTGTCTTATTTTATATGTAAAAAGAGACC
GTAAAAAAATANNNNNNNNNNNNNNNNATTTTATGTCACGTAAAATTACGACCATACAAG
AATAGTCCAAAAAATACAATAAACTTAATTTTTTTTGGTCTTGTGACCTATATTTTTGTT
TTTCTTTTGTCAAATATATATATATATATATATATATATATATTGCGAACATACCACCAT
TCAGTCATTTACACAACACAAGCAATCAAAAAACATGTTTACAAATAGGAATGCCACATG
AGAAAGATAGATATTTCAGACTATCACCGGTCAATTCATTACGCTAGAAACATCTTACAT
ACACTCTACTAGTAGTAACTGATGTGCAATACATAACAGCAAAAATGTTCACAGCAAAAC
ATCTGTTCGTACCATGAGAAGATAGAAATGACACATCAATTTGCACTCGGGTCAAACAAG
AGCAAGAACATTCCACAGGCATGAGCAGAAGAAACCCAACACTGCATACTGGCAAGACAA
CAACATGATGCGGCTTTCCCAGAAGTAAAGAGCCACTGTAACATGTAAGCAACAACATGA
TGCGGCTTTCCCAGAAGTAAAGAGCCACTGTAACATGTAAGCAACGTCGCCGTTTTATGC
TGGGCTTCTAGATCTGGCGAAGATGGACAGTGGCTGGGGTCAAACAAGGCTGTACTGGAG
CAAAACGTCACATTACGCCAGCAAGATCTTGACACCTATTCCGAACGCAAATCTCAGATT
TGCTCCTGCCAGACACTAGCTAAACGCCAACAAGCGATTCCATCTTACGCATCCCTTTCC
CACTCCATCTTTTGCATCCAAATCAACTACTACTACGCCAAAAGAGCAACCTGGCAATGG
GACACCTAGGGTTTGAGGGGTTCGCGTGGGTATACCTGGAGGTTGTTCTGCTTGATGTAG
GCCCAGATGCGCTTCATGGCCTCGGTGCGGGGGACCTCGGCGGCGCCCATGAACGCCTGC
AGCGCCGGGGACACGGGCCGGGGAATCGTGATGCCGGTCGCCGCCCTCTTCTTATTGGGG
GCCGCCGCCGCGGCTGTAGACTTGGCCGCGGCGCGCACGACCACGGCGGCAGCGGGAGCA
GGGGGGGGGCCCCCGCGCGCAGCGCGGGCGGCGGCGCCGGCGGCGGCCGCGGCGCGCG