Map Locations of contig_1557782 (8147 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1557782

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_9783 1 3417 bp AK363778 Available Available None





CDS Structure of MLOC_9783






Contig Sequence (8147 bp)

>contig_1557782 8147 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGATACTTGCTGGGCGCGAGGGTCGTCACCGTTTAAGCGCCGCG
TGGTACAGTAGAATGGTATTGGGGAAAGACAGGAGAATTAGAGGGGTAGAAGAGAAGCAT
AGGTAGGAACTGGATATTTCATTGCTTGCTTCATTACAAGGGAGATACATCCTTGTATAG
ACACTTTGTGTCTGTTACTGTTCACTGATCAGCAGTGTTCAAGAAAGCGTTTTTTAAGTG
ACGCTTAAGCGCCGAGCGATGGCAAACCGCTTTGCTTTTGCCTTAAGCGGTAGATTAAGT
GGGGTTTCAAAATTGGCCAGAATTTGGCTGTTTTTTAACTACTTTTGCTTGTCTGCTTGC
GCAATAATGGCAATATGCCATTTATCTTATTATTAGGCTCTGTTTGGGAACTATTTCCCT
CATATTCTGTAAAAATTCTGGCCACATGATCTCTATTAGGCTATGACTGTTTTGAACTGA
ACTGCATTTTAGTTGTTATTTAGCTTGCCATGCGAACCTGATGTGTATTTGCTATGTTGT
GAACTGTACTTTAGATGCTATTCAATTGCCCATGTGCCATGTTTACTACTTACCTGTGTA
TATTATTCAAAAATCTGTCAAATTCTAGCCAATTTGAAGAAAAAAAAACGCTTAAGGACT
CTAAGCTGTGGCCTTCCGTTTCGCTTACACTTTCCGCATTTTTTGAACAATGCTGACCAG
TAATTCAACACACCCTAGATAACTCTAGACTAGGCTGAGTCCATCTAAGAGACAACTGGG
CTCACTCTTCTACTAGGACAATACACCCTGGATACTTCTCGATGAGGCTGGGTTCATCTA
GGAGATAGCTGGACTCTTCCCACACTCTTCTAACAGGACACACACACACACACCCACACC
CTCACCCTAGATACTTCTACACTAAGCTTAATAGACAACTGGACCCTAAGATGCCACAAC
ACTTGTGTTTTTCCTCTGTATATGCAAAGTATTTTCTGGGCGAAGTATAGCTTAGAGCAG
GGTACCTACTTGTTTTTCTTTTAACCGCAGAAAGATTTTCAGTGTACACTGTTCTGGGCA
CTTCTGGTTACCCAGTAGGATGCTTTTACCACTGAAAATTGAACTTCTACTTACTGGTTA
TCATTCTTGTATTATAAAACCTGTGGACTTGGTCTGAGGTAGAAATATTCCAAGGAATCT
GTGTGGCTAGATAACATGAACGTTTAGTGTTGGTGATTGAGCATAACTATGTTTCAATCA
AGTGAATGATCAAACATTTTTTATTAAGGCCAGTTGTAGCAGTCTGTTTTCATATCTTGC
CGCAGACCCCCCTGAGTCATTGATATGATCTAATCTATCTTGTGTATTAGAATAGATCCA
TCTAGGCATGAAAAAAATATCAAAAGTTCATGGATGCGGTTCATTATTGTAGAGCGGTAT
ACAAATTGGCAGTGTGTGGAAGGTGAGAATATAAGAACCGGTACCAGATATAAGTGAACT
AGAAGTATGTATTTGCTGGTATTTTCTCAAAAACATTGTCTCACAAATGGTATCACATAT
GATGATTACTCATGCTTGGAGAAATAATGCTCTATAGTCTATACTCATCATTGTGGGCTT
CACTTTTGCTTATAGTTATACATCAAGTTTTTACTAGCTTGCGGTGGTGTTGATGGTAGT
TCATTTTAAGCCTTAGATCCTCATCAAATGCTTTATGATATATGTCCTGCTTTGAAGATT
TCCATACGAGGAAAGCAATCTTACTGAGCCTTTGTACACCACTTTCCACCCTTTTGTGAT
TCTGAAGCTGCAATTCATCTAGAATGTTTGTTAGATTTATCTAGAAAGAAAATATTGTCC
TACTTCCGACGGAAACTTTTTGTAGTGTAAGATTTCTCTCTGTAGGTTTATTTGGTCCTG
TAAAATGTAGTAGACCTGTAAATATGGCAGTCCTGTCAAGTTTCTTAAGTACAATAAACC
ATTTAGGACAACACTCCCAGCTTTTCTAAGCATTGGTTTCTTAAATCCTTTAGGATGCTG
CTTCTAACTAATGACCTTCTGTTCTGGATTAATCCTTAGGGAGGGTAACAAACATTCGTT
CAGGTAGCATGTTTAAGGGCGTGCCTGAGTTTGAAACTGTGAAACTCTAGTTTAAGTCAA
TGATTAGCAACTTCCATTTTGGCATTCACCGAGCTTTCAGGGGCACTACAAGTTACTAAA
TTTGAATAATGCAGGGTTCTAGCGATATTGATCAACTCGGGAAGATCTTTGCAGCGTTTG
GAACTCCAAAGTCTTCTCAATGGCCAGACATGGTTTGCCTTCCAGATTACGTTGAGTACC
AATTTGTCTCTGCTCCCCCGCTTCGTTCTTTGTTTCCAATGGCCAGTGATGATGCTTTGG
ATCTTCTGTCAAGAATGTTTACATATGATCCAAAAGCAAGAATCACTGCTCAGCAGGCAC
TGGAACACAGGTAATGCCGATGTGGCCGGTCGGAAACACAAGCCTTTCTCTGTTGCAAGC
ATGCCTAACAAAACTGTGCTTGTGTTTCATGTGAAGGTACTTCTCATCAGTACCAGCCCC
AACAAAACCAAATTTGCTCCCAAGGCCAAAGCTGAAAGGGGACCCAGGGAATGACAAGAT
ACCTGATCTGAATCTGCACGGCGCCCCTGTCGTTGTGTCCCCGCCGAGGAAGTTGCGCAG
AGTGTCTGCCCCTGATGGGATAGAAAGCAATGCTTATCGAGCAGAGAAAGCAGAAGAGCA
TCCTACTACAGGCATGAGGCGCAGCGAGGGCATGTCCAGTCAGAGCTCTAGAATACCAAT
GTCAGTTGATGTTGGAGTTGTGTTTGGCACGCGACCAGCTCCTAGACCAACATTGAATAG
GTAAACAGCACTAGTCTGACCACTGGAACCTATTCCAGTTTTTAAAATATGATCAGCGCG
CCTATTGCTAGTACATCTAGGATTATATTTATTCAGCTCTCTTCATGTCTAATATTGATA
ATTTCACCCCCCTTGCAGTGCCGACAAGTCGCGTCTAAAAAGGAAACTAGACATGGATCC
TGAATTTGAGTATGCAGAGTAAAAGAAGTTTGCATGCACCATTTTTTTCCTCACTGTTGT
GTCGATATTTTATACATGTTCTTTGAAGAGGCAGTTCCAGCAAAAAAGAATATGTCCAAA
GCCGTAAAAGCTTCACTGAAGGTCGCCCAGAAAATCAACTGTGCTGTCATCGTATAACTG
CCCAGCCAAGCTCGTGGACATGATTGTGAAGAGACGTTGCTGATTTTGATTTGCAGCGAG
AGACGTGCAAAGGTCATTCCTATAATTAGCCGATTTCCATGAGGAAGGCCCCTCAATCTG
TAACCTTCATTGGGTATACATGAGTTTGGCCCGGCGAGAACATCAGCCTGTAATCTTTAT
CGGATATAAATGAGTTTGCCTTGGTGAGAAAATGTATTTCCATTTTTTTCTTGTGTGGAC
ATTGAGCTTTTGAGTGTTGTTTAGTCAGACATGTTAGGTGCAGTAATTCCTGTAACCAAG
AGCAGGTTATAATATTATATGTTGATTCTTGTAAGACGATGTAACAGTGAGTGCATTGGT
GAAAGAGCAGTGTTCGCAAAGGAAAATGAAAGAAACTCGAGCGTTGATTCCCGGATGAGT
TGTTCCAGTATATATTTATCATTGCAGTGTGTAGCAACATTTTTTAATGCAACCAGTACT
GTAAATATTCAGTCATGAACGCACAATTACCATCTTGCTTGCTGTTTTCCTATTTCTAGG
TTCAAACATTTTAATGGAGAAGCAAACAAGGTCGCTCATGAACTAGCTAGGCTAGCTACA
ACTTCTGATTGGCTTGAGGGACCGCCGAATGAAATTGTGACCCTTCTCACATACGATGTA
TCTTTTTTATCTATTGAATAAAGGAATCCACTACATAGCGGCGCAACACATAGGTCTTTC
GATGCTGCGGTTTTTTTCGTGCATGCAAACTAATATACTAGCATGACAACGCAACACATA
GGTCTTTCGATGCTGCGGTTTTCTTCGTACATGCAAACTAATACACTAGCATGACATCAG
CAAAGATTTCTCTGATGTTAAACTTTTAAAATGTTTCATCTCTTAAACTATAAATCCAAT
TGACGATCCGCTTTCATTTTTAGCTTTCTTGCATTGAGATCTTCAAAACTAGATCCCATG
TTGACATGTTTCGATAATATATTTTCTTCGTTGATAGTTGCCAGAACACTATTATTTACT
TGTCACAATATTTGTCACATAATTCCCACATTAAGTTAACTTGGTTATCAGGTTTATGAA
TGTCGATATACCCCACTAAAAAACTTGATTCATTGTGCTTGTGCTGGTTCATGCATTTAC
TTGCTTATTGTTAGTGTTTTAATAACCATTTTTAGCTCCACATAACATTGCAATACTTAA
AAGATATAAAATTATTGTCCCGCTAACTATGTATAATTTTTGTGACAATTGCACACCGGC
AAGATGACAACTACGATGACATAAATGTGGCAACTAGGAACGACGAAAAAAAAAATCAAC
GAAACATGTCAATGTGGGATCTTATTTTGAAGGTCTCGTCAAGACGAACCTAACGGTAAA
AACGAATCTTCAATCATATTAATCTGTGAGATAAATCATTTTTTCAACCTGCATGCATGC
ATAGAGTCCACGTTGTTGTGGAGCAGGTTGAAAGCGACGGGTGACTTTTTTAATGCTCGG
GCCTGTATGCACGGGAAGGACAGGGTGCGGCGGTGCTAATTAGTTTTTCCCTTGAATAAA
GTGTGAGGTGCTTTTATTTCAAAAAAAAGAACTTGTTTCCAACGGCATCTCCAACCGGAT
CACCAATTGGATATCATCTAATGTTTGTGGACGCTTCATATATGTGGACATTCGACGGGC
GCGGGCCATCCAACTCGAGTCACCAAATGTTCACTCAGTTTGAACAAATCAAACATGAAA
CAAGAACGAAATTAAATAAGTTCAAAATAAACTTAAAGTACCGCATAGTAGGACCTCATA
GGCATGGCCTCTGAGACCACCTGCACCATTCTCATCGGGCATGCCAATGTTCCCGCCGCC
CACACTATTGTCATAATCGTTGTGTCGGTGGCGAATTTCCCGCCATGTGTTGCAGCATCC
CTCCCCGACGGCCATCGGTGCGCTCGTTGCACAACCGCTCGGTTGCATCCTCCACCGCCT
TGGAGCCGGATGGCGCGATAGGACTCCACCATCACATGGAGGAGTTGGGTGTGTTGAATC
AACACTGGTGACGGGCGTCCGACTCAATGGCGGTCTTGGACCGACTGATAGCCCAAATCC
CCACGAACACCTAGGCCGGTGCTGCGAGGGCCTTGGCGAATGCCGCCTTGCGCTGCATCG
GGCGCCACTCTCGGCATGCTCCTTCAACTCGGCTTTGCACTTGGACGACGATGCGCCGCC
GACCCCTTTGAGGTAGTATCGTGGAGGCATATATAGTCGCGGCTTCACCCAAGAAGAGGG
GGGGGGGAGTTTCTTCTTGAGGGCGGGAAGGATCGAGCACCACCGTGTGCCCGACTGGCG
ACAGGAAGGGTGCGGAGGTTCCTTCTTGACGCATAGGGGGATGTGGTGTTGGCTCGACGT
GCGTCCGAACTATTCCCCCCGTTTCTAAATATAAGTCTTTCTAGAGGTTTTATTAATGGA
CTATATATACGGATGTATATAGACNNNNNNNNNAGTATAGATTCATTTATTTTGCTCCAT
ATGTAGACCTTTAGTGAAATCTCTTGAAAGACTTATATTTAGGAACAGAGGGAGTAGACA
TCATGGTCGCACGGAGGAGACGGCGACCGGGCCCCGATCGACCAACGAACGACATAAAAC
CTCCTCCATCGCCACGTGAACTCGCCGTACAATCGTGCCGCTGCAACAAGAAACGATGGT
TGTTCATCATCATTGTCCAACGAGATTGGCTCCACTTTCATGATAGATTGATTCGTGGAC
GATGAAGGGACTGGTGACCATGGGTGATGAAGCGAACTGGATCGTGAGCTCCCCCTGGAA
CTGTCGTCGGTATCCGCCGAGTAGGCACCACACTTAGCTCTTCCCGACGTCCGTCTTCTT
GCCCATCGCTGCGGCCGAAGGTGTAGTGGTGTGCAGCGACTGATGAAGGCGTGGGAGAAA
TGAGTGTGTGTATAGGGTTTGCGAAGGAGGAGGTTGATCAACTTTAAAGCCGGAGTAGTC
TCCTCGGTCGCCATGCTGCCGTGAGTGCAGGTAGGCGGTAGGGTGCTTAGCCGGTGGAGG
CGTGGGAGAGGAGGAGTGTGCGGATAGGGTTTGTGGAAGAGGAGGAGGCCGACCGACTTT
ATAGCCGACATAGGCTTCTTGGTTGCCGTGTCGGCATGAATGCAGGTAGTGGCAGGCCGC
TCAACCTGTATGAATGCAGGGATGGTTCTAGAGCCAGACATCCAAAGAGAGTTTTTGGGC
GACTCTAGGGTGTCGGAATCTACATGGCAGACGTCCGGACTCCTTTTTTTTTCTTTTCAT
ATTTCTTTTGATTTCTCGGCTTTCATCTACTAGGAGCGTGGAGCAAAGTTGCGTTTTCTC
ATCAAATACAATTGTGCTTCTCGTCTCAAAAGCACGATTACGCTTTCCCAAAAAGTAAAT
CATAGTTGTGTCTTCAAGTGAAAGCATAGTTGTATTTGTGTGCGTCCTCAAAAGTGAAAC
ACAATTGTGATTGTGTCTGACGCACAGTTGTGGTTCCACGTTAAGCATAGTTGTGTTTTG
ACTAAAAATGAAGCAGAATTGTGTTTCTCATGTGAAAACACAATCACACTTCTCCCAAAA
GTGAAACACAGTTAGTAGTTAGTACAGTTCTTGAATCACAAACTAGCTCAATTTTCGAGC
ACATGTTGGAGCATTTCTAGCACATCCGATAAACCGATGCTTCGCAAAATTTATTTACAC
ACGGCCTGTAAAACATTTTTGCATTACCATGAGGCCTCTGGCGGAGCAGATCCCATAAAA
TCGTCCCACAAATGTTATGCGGGACGACTTTACGAGATCTGTTTCACGCTGGAGGCCTTG
CGGTACCGGAAAAAGAAATCATAGGAAAAATTGACAAGTATGCTTGCGGTTGGGAATACA
ATAAGTTTATATATACATCACCACTTCATCGTCATAGTAGTTCATCACATCCAAAATCAT
ACGCAACATACGAGGTATCAAGATTGCGCGATGAAACAAAATAAAACATGATAAAATGAG
CATTGGGAAGGGAGAAATCAAGCAACATCCTCATTGTTGCTAAGATCACCACCACCACCA
TCGGCCCTAGCACCTTCATCACCATCACGCATCTTGACCAGAGAATGGGCACCACCATCT
TCAACAACTTAGACCGAAGAATGACACCACCACCACCACCATCCACATTGTTTGTCGAAG
CACCACCATCACCTTCATCAACAATGTCGAAAACCACACCACCTCCAAACCCACCTCCAC
CATCATTGCCGAAGCCACCACCACCCCCATCACGATTGCAGAACCCTCCACCACCATTGC
CCCACCTTCCACCACCTCCAACCCCATTGCTGAACCATCCACCACCCATGTCGAAGCCAA
CACCACCAACATTGCTAAAAGGAAAATCCTGTCCAAACCCAACACCACCAATGGCCATAA
GATTTCGAAACTCCATCTTTCTCCGGCACATGATCTCCATTCTTTCCAATTCCCCAAATT
CTCTTGTCGTTGCATCCATGCCCTCTGGATTCATCATCATGAACCGGTCCTCCTCGGCGG
TCCTCTCGCCCTTCCTCTTTTGCTCCTCTAGGGCGATGTAGCGTGATGTGTCCTACACAA
CTTTATTCTTATAGACTCTGTTGGTCCTTCAAGCATAGAGTTTTGTAGGACAGTAACAAT
TTTCCCTCAAGTGGATGNNNTAAGGTTTATCAATCCGTGGGAGGTATAGGATGAAGATGG
TCTCTCTCGAATGACTCTGCAATCAAATAAAAGAAATCTCTTGTGCCCCCAACACACCCA
ATACAATGGCAGATTGTATGGATGCACTAGTTCGGCGAAGAGATNNNNNTACAAGTGTAG
TATGGATACTAGATATAGGTTTTTGTAATATGAAAAATATAAAAACA