Contig Data
morexGenes
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Map Locations of contig_153817 (2306 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_153817

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_9606 1 2070 bp MLOC_9606.1 Available Available LOC_Os09g23810.1, FRAME:+2, EVALUE:6e-30, 13109.m02254 protein retrotransposon protein, putative, unclassified





CDS Structure of MLOC_9606






Contig Sequence (2306 bp)

>contig_153817 2306 assembly3_WGSMorex_rbca.fasta
GTTCTTTCATTGGCTCGCCAACCAGGACCGCTGCTGGACTGCAGAGCGTCTCGCCCGCCA
TGGCCTCCCCCACCACCCTCGGTGCCTCTTCTGCGACCAAGAGCCGGAAACGATCCGGCA
CCTGTTGCTCACATGCACATTCGCGAGACAGACCTGGCATGAGGTCATGTCCTGGCTGCG
CCTGCCGGCTCCGGTGCCAGACCAGGATGCCACGCTCCAGGACTGGTGGCTTTGGGCAAG
AGATGCCACGCCACACCCGCTCCGCAAAGCGCTCGCTTCGGTTGCACTCTTGGTGCCGTG
GATGATCTGGAAGTATAGAAATGCGTGTGTCTTTGACCATGTAACCCCATCGCTGGTTGA
GCTCGCTGACCAGATCAAGGACGAATCCCGAAGTTGGGCTGAAGCCGGGGCTAAAGGGAT
TAGGATCACCTTGCCCTCCTCCTGGGACGTCCATTGATCAATATGTAACACCGATGTACT
AGCCTCTTAGGAGGATGTATCCCCCCCCCTTATCAATGCAATGAAACGCAAAGGCTTTTT
GCGTTTTCTCGAGAGAAAAAATATATCTTTTACAAGCTCGTCAAGATCCCAATCACCCAA
CTAAATCCAAGCAAAACCTCATAATCCATCATAAAATTAGGTCAAAATATGACAATCACC
TAACTAAATGCATTTTTTCCTAATTAAATTAAATATTTCTTTATCCACCAATATAATAAC
CCTCATGCTTATCTTGTAGACCAAAAATCTCATAATCCACCAAACTTCCTCGACTATCTT
CTGAAGACACAATCACCTAACTAAATCCAACTAAAATCTCGTACATCATCGAGAAATTTG
GCTCAATGTCGCGATCACCTAACTAAATCCAAATTGTTCAAAATTAGTTAATCCACCGAA
CATCTTTGACATCTCCCCAAGATCACAATCTACTAACTAAATCCATTGATAATCTCGTAA
TCCACCGCGAAATTTGTTCAAAATCACAATTGCCTAACTACATCCAGATTGCTCCATGTT
TACCAAAGATCCATTTATCCACCAATATAATAACCACCGTGGTCCCTTACTAGACCTAAA
TTAGCGTATTTCATCAATCATCTCTGACTATCTCTTTAAGATCACAGTCATCTAACTAAA
TCCAACAAAACCTCAAAATCACATCATGAATTTGGTTTAAAAAAAACATTCACCTAACTA
AATCAAAATTGTTCCAAATTAAATTAAAGATATGTTTATCCACCAATATAAAATCAGCAT
TCTCATCTATTATACCTAAAATCTCATAGTCAAGCAAACATCTTTGACTATATTCTCAAG
ACACAATCATCTAACTAAATCCACGTAAAATCTCATAATCCAGCGTGAAATTCGGTTTAG
TATCACGACCACCTAAGTAAATTCAAGCTGTCCAAGATTAATTAATCCACGAAACAACTT
TAGAGTATCTCCTCAAAATCGCCATCAACTAACTAATCCAACAAAAATCTCATAATCCAC
AATAAAATTTGGTTCAAGGCCACAATCGCCTAATTAAATCCAAATTGTTTCAAATTTATT
AAAGATTCGTTTTTTTACCAATATAATAATCAACATGCTCACCTATTAGACATAAATTTA
CATAATCCACCGAACATATTTTACTAACTCATCGAAATCAAAAACACCTAACTAAAACCA
ACCAAAACACCCACCGTAAAATTAGGATAAAAGATCACAATCACCTAACTAAATCCAAGT
TGTTTGAAACTAAATTAAATATCTGTTTATCCACCAATATAATAATCATCATGCTCATCT
ACTAGACCTAAAATCTCATAATCAACAAAACATATCTGATTATCATCACAAGACACAATC
ACCTAACTAAATCCAACTAAAATCTCATAAATCACAAAAAATAGTTCAATATCATAATCA
TCTAACTAAATCCATATTGTTCAAGATCAATTAATCCACCAAACATTTTTGACTATCTCC
TCAAGATCACAATCACCTAAATCCATTGAAAAATCTCGTAATCCATCATGCAATTTGTTC
AAGATCACAATCGCCTAACTAAATCCAAATTGTTCCATGTTTACTAAACAAGTCGCTACT
TTCTTGGAGATTGAGGTTTCTTCTATCTCTAATGGCTTCTTTATTTCCTAAGTATATCTA
GGATCTTCTTAGTCATGTTGTTGTGATGAGCACACTATTGAGACTCCTATGGAGCTCAAC
ATCCACTTTTGTGTCCACCTCCGCTCCTTGTAAATCCGGATGTGTATCCGTTGCCTGGTG
GCGGGTTGCTATGTGTGCTGTCTTGA