Contig Data
morexGenes
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Map Locations of contig_151320 (3190 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_151320

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_9317 8 1857 bp MLOC_9317.2 Available Available LOC_Os02g16300.1, FRAME:+1, EVALUE:1e-25, 13102.m01825 protein retrotransposon protein, putative, unclassified
MLOC_9318 1 162 bp None Available Available None





CDS Structure of MLOC_9317






CDS Structure of MLOC_9318






Contig Sequence (3190 bp)

>contig_151320 3190 assembly3_WGSMorex_rbca.fasta
TTCAGTTTTAAGAGGAAACAGTTTCCAGTCAGGCTAAGTTTTGCAATGACAATAAACAAA
TCACAAGGTCAAACAATACCAAATGTCGGCGTCTACCTTCCTGAACCAGTTTTCTCACAT
GGTCAACTATATGTGGTGCTTTCTAGAGCAACCGCGACATCAACTATTAAGGTACTAGCA
CGTACACATGATGTCAACAACCAGAAGACTAAAAAGACCAGTACAGTCGACACATACAAA
AAGGGAAAAAAGAATAAGAAGACGAGTACAAGTGGGACCTATAGGAAAAATATTGTCTAC
AAGGAAGTCCTCACCAAATAGGTAATGCTTAGGATAAACTAAAGTGTTTATATTTCACAT
TGCATTGCTTATTTCTAACCTTAAATATCTACAGAAACATTGCAGCCAAGTGACAACGTC
GGAATTATAATCCAAACAAGATTCTCTTCAAGGAGGAATATTCATTACTATATAATGTCA
TTCATGATTTTAAGCTTCAGTTCAATATGTTCCGCTATCTTTCCTAACACTTCTAATTTC
CGAATAACTATGGCTACCTCTTGCAAATCACACTACCGCAAAACTTAAAAGAGCTCTTGG
TTTTTAAGAAAATAATCTGAACCCAGCATATAATTTGAAGTTAAAAATACATTTTAATTG
AAACAATAGTACTCAATAAATACGCTAAAGGTAGGCAGTGTAATTCTATTTCAAGTTATG
TGCAGGCATGAAGTATAACAACACGTCAATTGGTAGCAACCAACCAAGAATAGTAACACC
GCCAACAACGAGATATAAAATAGAGCAGAACCTGCTCTTTTTTCTGCTTGTTTCTCAATT
GCTTCTGTTTGTTGCTTGCCCAATGTTCGACAGTAAACCCAAACTCGAAGAGAACTTTTG
TACAACAAGGGAAGTAGAAAAAGACCAAGCAAAATCCCCTGCCAAAAGAAGTACGAGATG
TAAATGCTATAAAGCTCAAGTCAGACGATTGAAATAACAAATACTCTACCTGAATAACTG
TGGCTATCTCGCTTTGAGTTTCAGGTGTGTATATGAATGATCCTGATGATCCAGAGAACT
CCATCTCCCAGTAAAATTAAAATTATACAGACCATCAGATTTGCTCTTTTTTTATAGCAA
ACATATAGATATTTATGATAAGATTTCTGCACTCATCTGGTCCACTAATGTCATACAAAC
TTTCTTCTTTTCTCATTACTTCCTATTTTCTCGTTCCTCAATTGCTTCTATTTGTTGCTT
CCCAATGTTCGACAGTAAACCCAAACTCGAAGAGAACTTCTGTACAGCAAGGGAAGTAGA
AAAAGACCAAGCAAAACCCCCTGCCAAAAGAAGTACGAGATGTAAATGCTATAAAGCTCA
AGTAAGACGATTGAAATAACAAATACTCTACCTGAATAACTGTGGCTATCTCGCTTTGAG
TTTCCGGTGTGTATATGAAGGATCCTGATGATCCAGAGAACTCCATCTGCCAGTAAAATT
AAAATGATACAGACCATCAGTTTTGCTCTTTTTTTATAGCAAAAATATAGATATTTATGA
TAAGATTTCTGCACTCATCTGGTCCACTAATGTCATACAAACTTTCTTCTTTTCTCATTA
CTTCCTATTTTCATCTCAAAAAAATTCTTTGTGTTGATAAAATCCTTTTGCAGAGCAACA
TCAGGTATTTGGTGATGCAAACATTGATTTAATTACCCCGATAGTAGATAATGGAACCAT
TCCAGAATCTGGACAATTTGACACTGTTAATGAAAATTCTACTCAACATGGAGACGACTC
CATGGAAGAACAATTGATGCAGTCACCTGCTGCGGCGTCAACATCTATCTGGTCCGGACA
ATATACCTGAAGAAAGTAATTCTGATTTTGTGCTAGCCGGTGTGCAGAATCATTTGTCAA
TAATGAAGGATCTTGTGTTGTAAATCAACGGAAAGAAATGGATTATTCCGACCACGCTAT
TGAGGTCCATTGCGAGGAATAAATACAGTGCTCATCTTATGAGGTAAACTAGGCCATGCC
AACACCTTTAGATAATTTGACACTGAATGGTGATGGTTCACCTGATATGAACATGCGATA
AAAATATTATGTTAGCCTGACTGCATCGATGATGCAATATGCACTGAAAATTGCAAATCT
TAATATTCCGTCACCAAATTCCTTATCATTTTGACTAATCTGAGCGTCACATTTGGGTTA
CATAGTGTACTGCTTAGGTTGTACTCATTAGAAACTTCCTAATACAGTTGTATTCCCTAA
ATTCTTCATGTTTCCGATTTCTCTTAATGTATGATGCACCGTTGTTAGTTGCTCTCCTAT
ATCTCTCTGCTCTGCTGCAAATCTTTTGATTCACACGGGCCATTTTGCTATAAGATCAAT
AGGGCAAGTAGAAAGAAGGTTTCTTTGTGAGCCACTGAATACACTACAAAACAAGGATCT
AGGGAAAATGTATAAATGCCTGTTAGGATATGCAATCAGATATAAACAGAAGAACAGAAA
TAAAGATCTAATTACATCTTACACTTTTGTTGCCAAATTCAGAATTTTCTTTTCCCCAAA
CACAGGAACAGAGATCCATCTCCTACTCCTGGAAAGCAAACTGCAGACTCTAATTGTACA
ACAGATCCTGCTCCTTCATCCCCACAACATATAAATTTCTCTGCATCAATTGACCAAACT
TGTGTACCTATATCCGATGCAGGGATGGATGGAACATGGAGGTGGCAGGAAAAGAGAAGG
TGAGTTGTAGGGGTGGTGGATCCCAACCAAGAAGGAAGAAGGGACTAACCTAGGGCCGCT
GGAGACGCGTCGGCGCAGCCCTGTCCGAAACCCTAGCCACGGGGTGGTTCCGACCGGGCG
GCTCAGGATGGGAGCCAAGAATATGTCCGGAGGAGAGGGATGCGCAGACCGTGGGGAGCT
CGGGAGCGTACTGCGTGCCGCCGTAGGTCGTCGGAAGCGCCCAGCGTGGGCAGCGGCGAT
GGCGGTGACTTCGTGGGCGAGGGGCGAGCCAGTGCTCTTGCTGTGGTAATGTTTTTTTCC
TCGGGCCCTGCAGGTTTGGTGTAGCCAAGACGAGGAAGCAGGTCGCCAAATACGAAAATG
ATCAATTACTCTACCAAACGACAATGCCTTTTTTTAATAGCGTTAATTGTTATTGTACTG
CAAGTAGTTT