Contig Data
morexGenes
Links



Map Locations of contig_146709 (3452 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_146709

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_8841 1 1414 bp AK371916 Available Available None





CDS Structure of MLOC_8841






Contig Sequence (3452 bp)

>contig_146709 3452 assembly3_WGSMorex_rbca.fasta
CCTCGAGCCAAAATAAGGATATGATCACATCTTGGATGTTACATCAAGGGAGGAGGAGTT
GGACTCCTCCCCCACCCAGATTTGGCCTCCTTCCTTAGGGAAGGGAGGCGTCTCCTACTT
GGGCCCTCGTGTCCCAAGTTACCTTCCACCTCTTGGCCTTTTAAGACGCGTTGATATTAA
ATTAAATATAAAATCATTATAAATACTTTCAAACCATTTTATGTATAATTTACCCCGAAA
ACATTTTCACATATGTATTATTTATAGGTAATACCCGGTATTATCTCATTCTCTACAGAA
CCCTTCTCGTGACCCTGAAACGCTTTCGGATCCTCTCGAAACTATTTTGAATATTAATGA
AGCAATTTCAAAAATACGTTTTCATCACTCTTGTCCTACTAACAGTTAGCAGATCATGAT
TACCTTAATCTAGTGACCCCGTAGGTTCGGTAACTCATAGACATGAACGAAACCCCTTTG
TTCAATGACCGATAGCGGAACAATGGACATCCACATCGATCCCTCTGAGAACATGAATGA
TATTCGAGTGAACCTTTGGTTACCTTGTGACATTCCCTTTGCTTCGCGATACTTTACAAA
CCCCAAGATGTATCAATACCCTCTTGAGTCATCACATGCTCACTATACCGTTATTCTCGT
TACCGATTTTGTTCTTCGTTCTCGTTTTCGTGTTCCGGCATGCTCGTGACTAAGGGACAT
GTGTCTGGCCATACGACGATTGATGCCATCACACCGAGAGGGCCCTAAGAATATATCTCC
ATCGTTGGAGGAGCAAAACCCACTCTCGAGCTATCTAGTCCCTTGTCAAACTTTTTGTTG
AACCTGAAAGTTTTAGTTATGATCATCTAGTTATAGATGACGTTTGAGTAACCCTAAAGC
TTACCGTATGGTAAGAAGTGACCACAATACTCTCATGTTCAAAGAAATATAAAACACATG
TTAACACTATGTGTTATAACAATTGAATTCAGATGATATTATCTTAAAGTATAACAAACA
AGTTAATGAGTCGATTCAATATGATCGTTTTTCTAATGTCATAATGCGAGTGTTGTTCTA
GGACTATCGTTACACTTGATGATATCCTAAGATCCGAAAAACATGACCACCAGTCTTAGA
GGCAAGACTAGTTCCTTATTTTAACTGTTTATAATTATCTTACTTGGCTGTCGATAGCAA
GGTTCATATGGTGTCTTTGCGAGTCTAAAGATTTATCAGATACTCAATGGCCAAATGTCA
TAATGTCAATGGCCAAAGATATCAATGTCATAATGTCTTTGCCTCAATGGCCAAATGTCT
TTGCGATTCAATATGATCGTTTTTCTAATGTCATAATGTCAGTGTTGTTTTAGGACTATC
GTTACACTTGATATCCTAAGATCCAAATACATGATCACCAACAATACTTAAGTCGGTCTT
AGAGGCAAGACTTGTAACCTTATTTTAACTGTTCATTATTCTCTCACTTGGCTGTCGATA
GCAAGGTTCATATGGTGTCTTTGCGAGTCTAAAGATTTATCAGATACTCAATGGCCAATG
CTGTGTTCCTCTGAAAAAAAAATCCCCGGGGGCACATATTAGTTAGTCTGTCCTCTCAAA
ATATAATTAAACACCACGTCAGGGATTATTATTTTTTTCTTTTTGGGAGACGTCAGGGAT
TAGTTAGTGGGTTATTAATCGGGTCGTCCCCGCACCCGCAGAAAAATAATAAAACGGCGG
TCCAGTCGCGGGGGAGAGGCAGAGCCCAGCAGCGGAGCGAGACGGACGAGCGAGCGAGCG
CCACCGCCTCCCACCAAGAAAGCGGCGCGGCAAAAAGGGCAGGAAACCCTAACCCCCCCG
CGCCACCGTCCCAGATCCGGGCCTCCCCCGCGCGATGGCCGAGGCTCCGGCGGCGAGCCG
CAGGGCGGAGGAGGCGGGGAGCCGGCGCCGCGCGGAGGAGGAGGCGGAGGCGGCGGCCGC
CGCCGACGGGGACGGGGACGGGGACAGCAGCGTCTACACCTCCGAGGACGAGGGCACCGA
GGACTACCGCCGCGGCGGCTACCACGCCGTCCGCCCCGGCGACACCTTCAAGCAGGGCGC
CTACGTCGTGCAGTCCAAGCTCGGCTGGGGCCACTTCTCCACCGTCTGGCTCGCCTGGGA
CACCGCCCACTCCGTACGTGCTCACCACCCCCTTCGCCTCGCCTCGAACCCCCCTGTTAA
AATCACCCCGTTACCTCTAGGATTCGCGACGAGGATATGTAGTGAAAACAACATTGATCT
GGATGCAGCTGTCTGCCTGCCCACCAACTGTTTGCTCTTTTGTCCCAGAGCTTATATGCA
GAAATGCTAAATCCATTTCTCATCATTACTGTTTTTTTCGTCAATTCCATCGCACTGCAC
TAGATATTTTGATGTTTTACGCCGCTTGCCTAGAGGCTCAGGCAGTCAGGCTGCTCCTGT
CCAGCGTTTCTGAATCTTTTGGTTATCTGTGCAGAGGTATGTGGCCCTGAAGGTGCAGAA
GAGCGCACAGCACTACACTGAGGCTGCCATGGATGAGATCAAGATCCTGAGGCAGATTGC
CGACGGTGACCCTGAAGACTCCCGCTGTGTTGTGAAGCTTCTTGACCACTTCAAGCACAC
AGGTCCCAACGGGAGCCATGTCTGCATGGTGTTTGAGTTTCTTGGTGATAACTTGCTCAC
CCTGATCAAGTACACGGACTATCGTGGGATTCCGCTTCCAATGGTTAAGGAGATATGCCG
GCATGTGCTCATTGGCCTTGACTACCTCCACCGCGAGCTTTCAATTATCCACACTGACCT
GAAGCCTGAGAACATATTGCTCGTGTCCACTATTGANNNNTCAAACGATCCCCGGAAGTC
AGGTGTGCCACTGGTGCCACCTACTGCAAGGGCCATCGAGCCACCTCCAAGGGCTCCTGC
NNNNNNNNNAACGAGTAGTGGCCTCACCAGGAACCAAAAGAAGAAGATACGGAAGAAAGC
CAAACGTGTAGCTGCTTCAACTGCAGAAGGCAATGGGGCAGTGGCATCCGCTGACACAGA
CGAATCAGATGATAAGGGAGATCTGAGTACAGCAAATGAGGGCAGTCCTAGCCAGGATGG
GGACAGGAAGAGAGGAGGGCATAGACGGGGCAGCAAAGGGACTAGGAATAGGATGGCGAT
GGAAGCTGAACTAGGCTGCAAGCTGGTTGACTTTGGAAATGCATGTTGGACGTACAAGCA
GTTCACAAGTGATATCCAAACAAGGCAATACAGATGTCCTGAGGTCCTTCTGGGCTCCAA
GTATTCTACATCTGCTGACCTGTGGTCCTTTGCATGCATATGCTTTGAACTTGCCTCAGG
AGATGTGCTCTTTGATCCGCATAGTGGAGATAACTTTGACAGGGATGAGGTATTTTTGTT
CATTTCCTCACTTTGGTTTCGACTAAGAACAT