Contig Data
morexGenes
Links



Map Locations of contig_145420 (3637 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_145420

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_8694 1 2481 bp None Available Available None
MLOC_8693 2 596 bp None Not available Available None





CDS Structure of MLOC_8694






CDS Structure of MLOC_8693






Contig Sequence (3637 bp)

>contig_145420 3637 assembly3_WGSMorex_rbca.fasta
GTTGTTTATTGACCTTTTTTTGACCAAATTTACAANNNNNNNNNTTGGCCGTCAAGAATG
AACAAACTTGGCCTTTCTAAAATTTTGGTCAATAGATTTGGTTTGGTCATTACCCATTTG
GGTGACATGGCATTGCTAGTGACCAAATGGAATCATCATAAATTTCACAGCCCAATTCGA
TAATCTTGTCTACATGGGCCTCCACCAATACTATTTTATTATTAAAAATATCTAAATTGT
TTAGGCTGATGCATTATTTTGCCAAAAGCATGTATATCTCAGGATAGCCCCATTAAAAAA
CAAGTATAAAATAATAAAAGATTGCAAATTAGTTGTATATATTTCATTTCAGTAGCACGT
CACATGAATTACAATACATCATCCATCGAATCCTCTACACATCAAAAGGGCCCAACAAGT
GCATAATCACACATCAACATAGTTCGACAAAGATTGGATGAGAAGCAGAAGTGTTTATTA
ATCACACATAACATCAATGATAAACGAAGCTTCTTGTTCCCAGCTCCTGACCTGTCCTCT
ACTTCTTCTGGGTGCTTCAGATCATCCTGGTAATTCAAATAATCAAACATAAGAAAGCAT
ACAAAATAATGTTTGCATGTACTAGAGGCTGGGGCGCCACCTAGGTGGGCCTCTACGCAT
TTATCTTATTTTCGCATATTCAGTTGTTACATCTAATAGCACTAATAACACATGATTGAT
CTAGTATTTTTGCTCCTATCAGTTCTACTTTTGAAGACACATACACATATTCATAGATCT
CACTTTTTTGGTTCTGATTAATTTTGACGCAATAACTAATATGCAGCAAAGTAGGTAATG
ATTAATTTCGAATAGAACAGAAAATAGACTGAAACTTGAAACTGAAATGGGAGAAATGCA
CTAGTGGTAGAAAACTTTGCATTTTTTACCTTAATACAGCAAGGGATAAAGCTTAGAAAC
AGTCACAGGAAATCAAATAGAATACCAGTTAACACATGCCCACAAAAATTTAGCTTAGAT
GTTATCAGTCCAGGCTTTCCGGAACCAGGGTTAATTATTGATCTGGACAATAAAGGATTA
GTACAGGCCTGTAAAATGGCTATTAAATCAAGGATCAAGACAAACAACCAGGTTCATAAG
TGCATTCTCTTACCTCCTCGTGTGAAAGATACATCAGTAGCCAGTTGGAAAATATATGAT
TACTGTATCTATTTATTCGTAGACAAAAAATACATCTTCTGACTTTTATAATTTTCCATA
TACTTTTCTAGAATTTTCACAGACACAATTAATATATAGTTTCTAATCATCCAGCTTTAT
CATGAATCTCAACAATCAACCTTTTAAAGACGTGTTCATGGGTGGTGTACAGCTGCACAC
AAGGATGTGTGCCATGTGGCAGTACCGGTACAAATCAAATGCTTGGCACTGATGCCAAAT
ATTTGACACTGAAGTTAAACCAATCATCCACAGGACCAGTGAAGAAAGAGAAGTTATTTC
CTTTCCAGACCATTGTGAAACTATAGGTATTCAAATTAGCAGGTGAAAGGAACACTCCCT
ATGCAAATGACGTTCTGCAATCACACTTGATGACAGTTCCAACTTGCAAGCAACCAGAGA
ATCACAATATCTACGAGAAGTCTTCCTCTCTATATTCGATCAGAGAACCAATATTGTGCC
CCCAATTGTGTACTTGATTATGTTTCTGACGACAATAGACTCAATGGTTGATCTAACAGT
TTTTATTTGCATGGCCTGCACCCAGCAAAGCATACTGCTTTCCCACTGATATAGATGTAA
AAGTAAGTGATGCAAAGTTTGAACGATTTGGTTATCCAGGTCAATAATATGCAGCGTCCT
TTCGTGGCTGGCTATATAATTGAACTGCTGCGTAAAAACTACAGTGATGACACCTATGGA
CCAACAACATGGAGTACCAGCACATTTTCTATGCACTTTTAGACGACAGTCTCATCAACA
AGTTTCCCTACATAGTGGTACTACTTCTACGGCCAGGCTCTTCTCTAATGATTCATGAAA
ATGTGCATGATCTGTTAGACCTGAATGAAACTTCTAGGTAGACAAAACTTATACTAGCTC
AACCCCCCTCCAGATTCATTATTCCTTTTTATTTTAATAAAATAACCCAAAGAAATCGGA
TGAATCAGCTTTCCATGGGCGCGGCATGCCGCCGCGCCTCTGGCATCTAGTCAAACTTAA
TAGCTCGAATGTCAGTCTAGAGGGTAAAATGCAACAGCTCAAACGTCGCCACAAGGGAAC
ATATGCAATGCAATAGTTCAATTGAAACCCATACAGGCTACAAAAAATATGTACTACAAG
GAGTATCAAATGGTAGCTCACTGTCTCCGTGTTGATTGGTAAAAATATGTACTACCTAGA
ACTTCTTAAACGATTAGAGCTCGTAGAATAATCAACTCTGACTCAACCACTATACAACAC
TGTCTCGGAGCTTTATCCCGAGGACTGTATAAACTTTCTGTATCTCCATGCAAAAACATA
GTGAACAGGAATGAGATTGGCGAACAAATTTGATTGCAACAACCCAAGTACCGAAATCTG
CTAAACTGTGCATTGCATTTGCATGGTTCTATCACATAATTAGAGAAGTTGCATGATAAA
ATGGATAAAATGAGGTCATTGAGGTGTGTGGAAACCGAGTAATGAAAGTATAGCTCACAA
CATCTGAAATATCACCATGGATAAGACTAACCAGATTCAGCTATAGAAGAAGGTTGTAGA
ATATTCACAGAGATATCAGCTAATGTATGTAATGCGTCGAGAGCTGACAATTCATCTGCA
GAACAAAGACCAGTCAGGCAATCAGGACCAAAGATTTTGGGCTATGTAGATATCAAAGCA
AGAAATCCAACAAGGTATCCTCCTGAGGAAGTTTGTAGGTAGATTGACTTTTTATTTGCA
GGATGCAACAACCCAACAGGAGAATAAATATTATGAAATAAAAACTGATGATAGGCAATG
CCAACACATGACATACTTATTTTTCATCAGATGGTCGAGAAAATGATGTACGTATAAGAA
GAAACTCAACCAATTTGTCCATCTTGCTGAATACTATTGGCATTTGATAGTTCGGATGTC
TGCATTGTATTCAGTAGTTGAGAAAACACTGCACAACTTTAGAAAAGATGAGACTCAGGC
CCCTTAAACCACCATACTAATAGTTTGACCCATGCTAGAAGCCTAGAAGAAATAATGCTA
TGATTGTATTTCAATAATTTCATTACTGCTGTGAAAAAATAAAAGATGTTGCTAGAACAG
GCATACGACCAAAAAATAGTTGGCGGCTTCTTTTGTTTGATTTGTTAGATGGCCATGAAA
TTTTACTTCAAAATACGTCCACATCTGCTTCATCTTTAGCCTTTCTGGAACTATATCCTT
GTTCAGTGCCACTGCAAGCCTCTCTGTCATCCTCGAATTGATCGTCTGTTTTTTGTGCAT
CTTTTGCATCTCCTTAACTTTTGGCTTAGACTTGCCAGATGCAGAACCTTCGTTATTCAG
AAAATAGGAAACATCTTTGCGATAGTCACCAGTCTCTGCTTCCCTCCTTCCTAAGCTACC
TTCCGGATAATCTTCTACTTGAAATCCATGCATCTTT