Contig Data
morexGenes
Links



Map Locations of contig_145363 (2192 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_145363

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_8687 1 652 bp MLOC_8687.1 Available Available LOC_Os06g40080.1, FRAME:-1, EVALUE:9e-95, 13106.m04166 protein heme oxygenase 1, putative, expressed





CDS Structure of MLOC_8687






Contig Sequence (2192 bp)

>contig_145363 2192 assembly3_WGSMorex_rbca.fasta
ATGTTATTTTACTTATTTAACATTTTTTAAATTCTATTTATGCAGTAAGTTTAAATAAAT
ATCTCAAGTCATGATTATTAGGTTAAGACGTGTTGTATGGTTTGCTTCCGTNNNNNNGCA
CGGGCTCTTTTGCTAGTACTAAAAATGAAAATCACATAGTATCGTACTAGTAGTACGACG
ATATGATCTGACGATCCGATACAACCGACAAGCACATGATACAACCTAGCATCCTTATAT
TGAAAACCTTGGGCTCAGCTGAATATCTTGCGCAGACGCTCTCCTGAATAGGCGAACGAC
GTCTCAGTCTCCTCCAGGCAGTGGTTCTTCTCTTCCCGGGTCCAGCCCTGCGCATAGAAG
TGATCGGATTAAGAGTTAATACACTGAGGGACACACGGGCAGAAAAAATTAGGAGCACAA
TCAAAGCTTTTGGACTTACAGAAGCAACTTGGTTAAGTTTTTCGCGGACATTCTGCAGCA
GCTCGGACAGGGTACCTTCCCACTTGTAGAATTCCAGCTCTTTCTTATCCAGAATCTTGT
CAGCAATCTGAAATGAATAGAGGGCATGATTACTAGGTTAACTCTCGCTCACAACATACT
GACAGATTACAGTCTGTGACCATGCCCTGATTTGCTTTGGATAAGCAAAGATAAGGATTC
ATGNNNNNNAACGAAATGGCCAGCAATAGAATGAATGTAGAAGTATTTAGATAGCAGAAG
AATGAGATATAAAACAGATCTGTATATAAAGTGACCCTCAACGGAGTGCATACAGTAATA
ACAATCCATTGTTAAGAACAATATGGGAAGCCATTCAGCTGAGCCTCTACTATCTTCTTT
TGGAATTTCAATCAGAAGAACCAGTGCCAACAACACATTGTTAAGAACAATATGGGAAGC
CATTCAAACACACACACTATTTGACCTCACATGAACGTTTTGGTTATGGTTCTGTGTTGA
AAAGTGGTACCTTTTTGCCGGTCAACCTACCTCCAGCAGATTGCCCAAAGTACATATTAT
AGAAGTGACAGAAAAATGCATGCTGGTCCTTCTCAGACAACTCTTCCAGATAGGAAGCAT
ATCTAGTGTCAGCAGCAGATGGTTCTGGAATTGTGTGACCCTGTTCACTGAACCATTTCA
GATCTTTCTTCAGTGCCTCTGATCTCTCTAACCCAGTATTCCGAAACTCTGCATCTGATA
TGCATAGATAACTGAAATGTCAATCAGCAGCATCTAGCCAACAATGATGAAAGAAATGTT
GCAGCTCCTTCTTAGGGAACTGTAATTTACGACAGAACAAGGTTACATAATCTGTCACAT
AAACTTTGCAACATATAATATGGTCAAACTTTGTAGGTTCTTACAAGTTTTCATGCAAAA
ATATCATGTAGAGAAAGGTGTANNNNNNNNTTTCAGATTTCAGTGCTAAAAGTGCTCAAA
ATTTGAAGTGTTAAAATGTTTTTTCCTGTGCAGAGCTCCTCAAATGTTTTTTTGGCATTA
AAACTTCCAAGCACTTAAAAAGTCTGTTCATCTTTAATCTTGCAAAGTTTCAGATTCTTT
AAAAAAAATTCTATTTATTTTGGTGTTACTGTTCATAGAGGGTGCGTAGGCATCTGGATG
CTGAAAATCCACTCTCTTTCAGTAATTATGCCATTTATTGTTCTAAGCAGAATAAACAAA
GTACATCCGTTGAGCTAACACATTCCAGTTCCAACTGAGTGACCAGAGTGTTACTGTTAA
TACAACTATGCAGCTAAAGGTCCCCTTTGTTTGTTCACAAATTACTTGTTGCATAACTGA
AGGCGGTCAAAGTAAACAGCCATGATTCTCACAAGTTCAAGTCAAACAAGTAAGTAAACC
ATCTATTCATCAAACAGGATTAATAGAGACAAATCTATAAACCGTTTGTTTGTTTGCTAG
TTTTGAAAAAGGCTACTATTTCCGTACCCCAAAAAAAAAACAGAGTAATTACGAAGAACA
CAGTTTATCACACCAAACCGACCAAACTAGTCCATATGAACAAGAACAGAATAATTGACT
GGTAGAGCTAATTACATAAAGAAAACCTCAGGGAAGGACGGGTTTGCAGCGACTCACACC
ATGGGACGGCGGCGCGGTCGACGATGTTCTCCAGCGTCTGGAAGATGAGCTTGCTGTCGA
CGAGGTAGCGCAGGTAGGCCTCAAGGTTAGGC