Contig Data
morexGenes
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Map Locations of contig_145161 (3153 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_145161

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_8660 1 237 bp None Available Available None
MLOC_8661 1 709 bp AK362747 Available Available None
MLOC_8659 1 651 bp None Available Available None
MLOC_8658 1 398 bp None Available Available None





CDS Structure of MLOC_8660






CDS Structure of MLOC_8661






CDS Structure of MLOC_8659






CDS Structure of MLOC_8658






Contig Sequence (3153 bp)

>contig_145161 3153 assembly3_WGSMorex_rbca.fasta
AAAACCATAAGACGGGGAGGATCCAACCTCGACTAGCNNNNNNNNNNNNNNNNNNNNNNN
NNNACAAGGGAAGAGCTCTTCCCTCTCGGTNCCAGACCGGAAACACCCATGCCCGCTAAC
CAGATGACTCGATTTATTCCAGGGTCAATGATACCTTCATCCCGGCCCGTCTACTTGGCG
TGTAGCTAGTAATAGGTCTACGACCTACTAAACCATATTCCCATTTAGGAAGACATGTGG
CAGCACGAAAGGTAAGGTGACACACTGACAAGACTCAATCTACGGCCGACTTTAGGAGGT
TTAAGTTTTCCTGCAAGGGTTAGTACCATATGATTTTGCTGTATGATATACCTCAGTGTT
ACCACCATCACACCCCAACATGCCTTGACTGACCAATCTCGTCCCACGAGATGTCAGCCA
CATGGTCTCGTATTCACCATGACAAACCTTCCTCCAAGGTTGTCCATGCCAACATGGCAT
ACGATGCATCAGGTAGTACCCACTCACCATTTGCATCACATAATCTGGCAACACAATTAT
CCATCACATGCTCTCAGCAAAGTATGATTTTATGCGAGAGTTCTTATCAACATAATGAAA
TCATGCATTCCAATGCACCACATCACACATCTTAGCACATATCAGAGTTCAAGATGCTTG
CCTTTGAAGTTTGAGGAGGGTGGTGTGCACCCCAAAATCTTGAAGGAAGTTTCCTCTCTC
CAAATTCCTATTTTAAAAATATTTAATAAACACAATTTCAAACGGCACATAAAAGTTGTT
TGAATTTTTTTTTAAATAAATATTAAAATAAACTAGATGTAATTTGAGAGAGGTAGGAAA
AAGAATTAGTTCATTTGGAGTTTTATTTATAAAGATATGGCGAGTCAAAGTTTCTAGTCA
AATCTGTTTTAAAATTAAAGAAAAAATAGAAAACAATCCGGGCATACTACACAAATGAAA
GGAAGAAGGCGTACTAGCAGGGATACGCCTTCTCTGGAGGGAAGCACACCCCCACGGCTG
CACCATCGGGGACTGGAGATTGTCCCATCGACAGGCGGGGCCTGCCTGTCGGGTTCCACT
TCTTCCTCACGCGTGTGCCTGGGCAGGGACAGTGGCAAGCTCCAGCGAGGCTAGCCGGCA
CTAGGGTCATCATTTGTCGTGCTGAGCATACCGGCATGCTCAGTAGGAGCAACCGTATCA
CATGGGGGCGGAGAGGATTGCCGGAGGGCTCGGAGGCGAGCACCTCTTCGCCCATGGCGG
GCGGTGGCTTGGGCACCCTGGCAAATTCCACCACGGCCTACTGTGGCTCGAGTGGGCAGG
GAAAATGGATTTGGGAGGTCTTGGGGAGGCTATCAGAGGTCAAGGGGGAGCGTGAGAGGC
TCGGGCTGCCGAAATTTAGCCGGAGATGGCCGGCGGTGCTACGGCCAGAGGGGGGCAAGG
CGAGGGGCTCCAGCCGAATTGAGGAGCGGGGAAGAAGGATGCGGGCTCCGGGAGGCTGCT
GAGCTGCTCAAGGGGCTCTGGGGTCCCTTTTATGGCTGGCCTGAGGTGGTTTCGCGGCGG
CCCGAGGATAAGATCACCGACGACATCCTCTATGGCAAAACAGGAGCGGCACACGCAGGC
TTAGAGTGCGGGCACTGTGTGGACGTTGCAGGGGAGGGACCAAGGGGCAGCTGGCGTGCT
GGGACTGCTTGGGCGGCGGCGGCCACTGCTGGGGTGAGCTGTTGTCGTCGGAGGCTGTCA
AATGAACTTTTCTGCCAACCAAAATTTCGACATCAAGGTCTCCTTAGGTACTAGTCATGA
TGGCAAGGCTAGTTTTGCAAAAAGCAAAACTAGCTAATGCAAAATTTTGAGATAAACAGT
TCTAGTCAGCAAGTTGAGACTATTAATTCATGCATTTAAATTAACCCAATGGGGCTCAAC
TCATGGACTTAAGGGTTTGGTGGGGTGAACTACGAACAGTAAAAATCCAAGGACATTGGG
GCAAATAAAATTGGGGTTGCAGTACAGAACTTCAAAGTGGACAAGAATAGAAAAGGGTGG
TTTTGCTAAAAAATTCCAAAACACATAATTTGTTTTTTGCATAAAAGTGAGTCTCATGGA
TCCCTTGACATCTCCAAATTTTAGTGACACCAACTCGACCAGAATAGAAAAAAAGATGGT
ATGTTCAAATTTTACAAAAACACTTGGTTATGTTTTTGTATAAAATTGATCCACGGACAT
CACGTGTCACCTACAATTTTTTGTAGAATTCTTAAGTGAAACTATCAAAGGGTTGCAGTG
CAAAAGAGGTCATTAAAAGAAATAAAAAGGCATTTTTGATTAAGTGAAACTTTTGGAAAA
TATTTATAAAAATGGTCTCCAATGAATTTGTGAACAGAAGTTAAATGTTTTGATGCAAGC
ACTCAAGTCCCAATAAGTTTTTTCAAAGGTTTCTATTTGAAGGAGAAACTTTATAATTGA
AAGAAAAGGAATGGTTCTGAAGTCAACAGAAAAATCCAGAAATTTGAAAATTAAACAAAC
ATGGCCATGTTTTAATATATCTCCATTAAATAAAGAATTAAAATGAACTCAAGCCATGAC
TCAAACACCAAATGATATTTAAAATGCCACTTGAAAAGAAAGGTTTTAGAAAAGAGGCTT
TGAAAAGAGCCATGAAACAATTTATTTTTCAAAAGATTTATTCTAGGCAATATTTTAATT
TATAAAAATATGATTAAATTTTAGGGGTGTGACAGTTTTATTTTGTGGAAATAACTCATC
CTCAAGTGGTTCATGGAATCATTATCAATAAGTTTTGGTAGAAGGGCTTGGATCATAGGA
TTGGAGCTGCCGTTTAAGTAAAATACACTTTCTATGTCTCTAGTTACATACCCAACACGA
AGTAACACCTTTACTAAGCTCAAAGACGCCCTTAACCAGAGATTCTTCTTTTAACCAGAC
ATACATAAACTAATTCCTACCCAAAGAATTTTTCCTATTCCTACAATTTATAGTTAAAGG
TTGCAGCCAGCTAAAATTTTGCATGCAGAAACTTTTGTTATGTAAGCTTAGCATATTGTT
TGTTGATCCCAGTGAAAACAACGGTAGCACCATAGCAGTGATGATGTCGAACATGCATAA
ACTATAGTTATAGACATGCACAGCACACCAATA