morexGenes - Barley RNA-seq Database

Contig contig_144564

Source Contig contig_144564

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_144564 (2357 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location

Predicted Genes from contig_144564

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_8595	1	1180 bp	AK371664	Available	Available	None

CDS Structure of MLOC_8595

Contig Sequence (2357 bp)

>contig_144564 2357 assembly3_WGSMorex_rbca.fasta
CCGAGGGCGCCGCCGCCGGCGCTGCCCCCAAGATCTCAAGGAAGAAGGTCGTCCACACCC
TCACGACCGTGCTCAACCATCGGTCGAAGGTGAGCGACGCGCTCCATCCAACCAACACCT
CTCTCTGCCCTTACCGCTCATCCCAGTGCCTTAACTCTGCTCGCGTGTTCTTGTGAATAC
AGGAGGCCTCGATTGATGACATCGACAAGCTGGACGGTGACAACCAGCTCGCCGTCGTCG
ATTACATCAACGACATCTACAAGTATTACAAGGAGGCACAGGTAACCACAAACCTCCCAC
TTCAGCATGCCTGTTCAAGTGACACGCGGCAAGCAACTGTCCTGACGATGTTTGACCAAT
CTATACGTGTTGCAGCACGAGTGCCGGCCCATCGATTACATGGGGAGCCAGCCGGAGGTC
AACCCCAAGATGAGGGCTATCCTGATGGACTGGCTTGTGGAAGTCACGCACAAATTTGAG
CTCATGCCCGAGAGCATGTACCTGACGATCTACGTCATCGACAGGTTCCTCTCCTTGCAG
GCGGTGCCCCGGCGAGAGCTGCAGCTCGTCGGCATCGCGGCCATGCTCATCGCCTGCAAG
TACGAGGAGATCTGGGCGCCCGAGGTATGGCCAAACACTTTCTCTCACCCCCTTTGCATC
CATCGATCGCCTGTTCGTTCGAGTATCTGTTCATGTCTGTTCTGTGAAGGAACTCTGAAT
CTGAAGTGTCTGTTGTCTGCAGGTAGGCGATTTCATATCCATCGCCGATAACTCCTACTC
GAGGCAGCAGATCCTGTCCATGGAGAAGAATATCCTGAACAGCATGGCTTGGAACCTCAC
GGTGCCCACCCCGTACGTCTTCCTGGTGCGGTTCGCCAAGGCAGCCGGGGGCGACAAGGA
GGTGAGAAGAATTGGTCATGGATTTTGATTCTGATCTCTGAACTTGTCTCTGTCTGACAT
GGAATTTGCGTCCTACGTAGTGCTGAACTTCGTTTCCTCCTGTTCTTGTGAATGAATGCA
GCTTGCAAACATGATATTCTTCTTCGCCGAGATGGCGCTCATGGAATACAAGCTGGTCAC
CGTGCGCCCCTCGCTGCTGGCAGCGTCTGCCGTGTACGCTGCTCGGTGCACGCTGAAAAG
AAGCCCTATCTGGACAGAAACCCTTAAGCATCACACCGGACTAGCTGAACCACAGCTCCT
GTGAGTGACCCATTTACTTGTCTTTCTGTTGTCTACTACCTGATCGATGAACTTGGCTGA
ATGAGCTGGAATTCATGGAAATTCTATCTGTTCGTTGGTTTCAGGGAGCCTGCCAAGATG
CTAGTCATGGCTCACGCCGCTGCCCCGCAGAGCAAGCTCAAGGCCATCTACAAGAAGTAC
TCTTGTGAGCAGTATGGGCGTGTGTCCCTGCACGCCCCAGCAGTTGCCCCTCCCCAAAAC
CTCGCCTAGGCTGCTTTAGGATTTGTTGCTCGGCTTTCGATCTTGAAAGCTTCGTTACTT
ACTGTTACTGTCTGATACACCAGGGTGTAAACAACAACTATATTCTTCATATCTTTTAGT
GATTTGCTTGGCTTTCGAATCAAGAGAGCTGCGTTACTGTACTTACGATACACCAGAGTG
TAACAACAACAGTTCATATTTGTGTGAATCGAATTCAGAGCTGTCTTTGTTTTAGTCTAT
TCTACCTCCATAGCATCAGGAGTGCCTCCATAGCAGACAGTAACACTATTTCAGATTGTC
AGAAAGTTGTTACCAGAAGATTTTTTTGTTGCATCTGAAAGTGTTTGCTCCTTATTTTCT
TGTCATCTGAACATAGAGCAATCTGCATATGATTTGTTTATTTTCTGTAATAAGCACATG
ATCAAAATTGTCATTGTAAACTCCATTTGGTTGACTGTTAAATTGTCATAACACGCACCA
CCACATGGGCCTGCACCATCTGTATTTTATTTTTAATCACTCATAACTTTTGAGTTTCAA
AAACCTAATCCACTCGTACAAAAAAAAAATCATTCCACTTGTCCACATATTTCACAAAAA
TACAAAAAAATACGAGTGAAATATTTCACTCGTTTTAATTTCAACGAGTGTTCTTGGTGG
AAACTTGTTTTAGAGCTAGAGATGCTCTAAGATGCCTGTGAAACTGGTCGTTGCATTGAT
GTCCCATTTTTACAAGTTGGTATCTTAGAGCCACCTTAAAATCATAAACTGTAAAACTAA
AATACAGTTGAAAAAAAAGACAGGTTCATTTTATGGCTGAACACATACTGTTGAAACAAA
CTGTAAAACTGGGATAAAGAGCTCCTTCCGTCCGGCCGCCACCGCGCCTTTCCCGGCCGC
GCTGGCCGCGACCAACC