| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_144072
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_8530 |
1 |
1538 bp |
MLOC_8530.1 |
Available |
Available |
LOC_Os01g50030.1, FRAME:-3, EVALUE:9e-34, 13101.m05207 protein CPuORF25 - conserved peptide uORF-containing transcript, expressed |
CDS Structure of MLOC_8530
Contig Sequence (1680 bp)
>contig_144072 1680 assembly3_WGSMorex_rbca.fasta
GCATGTACTAGAGGCTGGGGCGCCACGTGGTGGCGCCAACTAGGTGGGATTGTGCGCGTT
TATCTTATTTTCGCATATTCAGCTGTTACATCTAATAGCACCAATAACACATGATTGATC
TAGTATTTTTGCTCCTATCAGTTCTACTTTTGAAGACACATACACATATACATAGATCTC
ATTTTTTGATTCTGGTTGTATGCATAACATTTATGTTTAACTTAGCACTAAATTGTACTG
ATGTATCCATTTGTCACGATGCATGGCAGTATTAGCAGAGAATATATGCCCGAGTGACCA
AAGTTCACCACTTTGCGCACACGCAGCTACTGCCATCCATCCACACATATTTTCTCCTTC
GAAAATTAGTAGCAAGTCTAGTAAGCCAGGGCTAGGGTTTTTTTTGTCTTAATGTGGCAG
GCGAGGCTGTACTGACGCATTGATTTTCTTGGCAAAGGCAGAGAGAAAGATGAGGTGAGA
ATCCAGCAGCACCCAACCACGAGAGCTTTCTCCGTGGGCGTTGCAGGTCGATCCGGTACC
TTGGTGTACTGCACTGAACTCATCTGCATTCTCCTTTCTACTGAACTCATTTTTGCAGAG
ATACATAGTATATGATTAATTGGAAAGGAGAGAAAGAAAAATTGTACTCCCTCCATTTCA
TAATATGGTGTGTCTAGGTTTTCCGAGATTTGATTTTAGTGTGGCAGGAGCAAAAAAACA
TACAATTAAAAACTTCTTTCGATATACGAATTCTTTACTCCCATCGCAGTCGTTCAGGTT
GGTTGAATTTATGATCAAACTTAAATGGGAGAAAGGCACTAGTGGTAGAAAAGTTAGCAA
TTTTTACCTTAATACAGCAAGTGATAAAGCTTAGAAACAGTCACAGGAAATCAAATAGAA
TACCAGTTAACACATGCCCACAAAAATTTAGCTTAGATGTTATCAGTTCAGTCTTTCCGG
AACCAGGGTTAATTATTCATCTGGACAATAAAGGATTAGTATAGGCCTATAAAATGGCTA
TTAAATCAAGGATCGAGACAAAAAACCAGGTTCATAAGTGTATTCTCTTACCTCCTCGTC
TGAAAGATACATCAGTAGCCAGATTGAAAATACGAGATCCATCGAGTTGTCCTCAATCAC
CAGGTCTGGACATATAACATCAGCACACATGAAGGATGCATTTTCGTAATGGCCATTTAT
GCTTTCATTCTACAATGAAAATATATTGAAAAGAGCTGAGTGAACCAGTCATTTCATGCA
TGTGGCGATTAAAAGAATGTCATCGCATTTCAGGCACCCAATATGTTTTCTTAAATCAGG
AGTAATTAAATGCTGATACCTTTTTAATCACACTTTCAATGAAATCCATTGCAAGAACAT
GCCCAGCTGTCTTAGCTAGTTCTCGAGTAAAGTGACCTATAAACATTGTTCATGACAGCA
TTGGTGGTTTTGATAGAACATATCCTCTTGCTCTCCTCTTTCCATTCCTGCGCACTGCTC
TCCACATTGAAGTTGAGATATACTCCAGGCTGAGGGCGTTATTGTCATTGATTCCAAGGC
CTGGACTATGAGAGTACCCCTGCCTACCAGTCCTAAGCATTTCTGAAGTTAGGGACATAA
CTTCTCCACATTGAAGTTGACATATACTCCAGGTCTGAGGGCGTTATTGTCATTGATTCC
