Contig Data
morexGenes
Links



Map Locations of contig_143790 (4647 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_143790

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_8516 2 2257 bp MLOC_8516.1 Available Available LOC_Os12g08160.1, FRAME:-3, EVALUE:5e-42, 13112.m00860 protein conserved hypothetical protein





CDS Structure of MLOC_8516






Contig Sequence (4647 bp)

>contig_143790 4647 assembly3_WGSMorex_rbca.fasta
CTCATACATGTGTGGAAACATCCTCCCTTTTAAGGAGGTCCAACTCCCACTAAACTAGCA
ATGTGGGACTAAACTTTTCACATTTTGCCTTGCACAAATGGTGGGCCTCTAGGATTTATT
AGGAATTTCTGAAATTATATATTGAGCTGGACCAAAAGTAAATAAAATTCCAGCAGAAGA
AACCATTTAGATCCATACGACCTCGTCCTGCAGCTTACAAATCTACCTCTTGATCTTCAT
GATCTTCAAAAGCACATTACTTGTGCATCTTAGTAAGGACAACTCCAGAGTCATCAGTGA
ATCAAGAGGCACAATCTCAACTAAGCAATCCAAGTGTATATATGGACGTCGCAGTCCTTG
CATGGAACGACAGGCAAAATCTCGTCATGGCCTACGGACGAGGACGATGCAGACATGGTT
AGGAAGAGATGGAGCTGCTGGCAATGCTCGAATGGGTTCTGGTCGAGCTATAGATTTGGG
TGAGGGGTCACGTGGATGGAGAAGATAATGGAGAGGAAGAACATCAGCGTATTTGATCCG
CGATGGGGATTTTTGACGGTGTAACCAAAAGTCTTTCCTACTGATGGGCCAAGGGCCATA
ATGAAGAACCAGAATAAAAAATACTTCCTCCTTTTCATTTTACAAGTTCGACACGTGTAT
CTAGGTAGTCAATTTGACCAACTTAATGAGAGTCATATATTATAAAAATATATCATTAGA
AACTTTAAATGTTTTATTTTTTAATGATATAATTTTTATGTTAAATAATATATTTTATAT
AAGTCAAATTGATAATGAAGTATAAAGCTAGACCCACACTGCCGCCGCTGAGCATCACGA
GATACCCATGTGGTACAGATAAAGAGAGCACTGCAGCTCGGGCTTACAGTAGTACTTTCG
AAATTGCTTTCTTTATTTGTGCATATTTTTATTTTCTTTTTTGAGATGCATTTATTATTT
TTCTTGAAAAAGAGGATAAATCTCTGGCTTCTTCATCGATTGACCATAAGATACAACACG
AATGCTAGCCACCTTTATAATAATTATAATTTACAAACTGCAAACATTTTATCATTCCTC
CTAATCCATTCGTTCACACGATTAACATAATTAAACACAGAATTGAGAAAGATTTTGAAA
TTAGTTAGATATATATATATGCGCAGGTCAAACAATGATACACATCAGCACAGGTTTAAT
CAGCATGGAGACCACCGATCAGGACAGCCTTAGCAAGCTGTAGAGCTCCTTCAGGTACAA
GCTCTCCTTGTCGTTCATCCTCTTCTTCTTGGAGAAAAGCACCTCACTGATGAGCGGAAC
AACAAGGGGCATGATTGGCTTCTGCTTCTGCGTTTTCCTCTTTGTCGTCGCCGTCGTCTC
CCTTCCCTTGCCATGCTTAACCTCCTCGTTGGCATCGTCGAGGCTCAGCAGGTGTCGCAA
TGGATGCCGCTCGGGCTTGGCCTCGGCCCAGACCGTCAAGGCCGACGTGTTGATGTCCCT
CTGCTGGATGCTGGCCCTTGCGGCCGCCGCCTTGTCGGCCTCCATGTATGCTAGCCTCGA
GAGGGCACGGTGGAGCTTCACGTTGAGGTTCGCCATGGCTAACTCCAGGTCAGCCAGCTT
CCTCTTGACCTGCACCGCCTCCAGTCTTGTCTTGGCCGCCTCTTCCTCCACCTTCTTGAT
GGAGCTCATGATCGTGAGATTTGCTTCCTTCCGACCCTGCTTGTCGTAGCCTTCGCCGTG
TGCTAGAGACGGCGACGATGATGTCTGGGACCGTGGAGACAACGGGACCAGGCACATTGT
CTGGGCATTAGACACTGGCATTGCAATTCTAGCAAGCTCACTGCTAGTTCCCTCGTGCTT
GGCAACGGCAACAGCGACGGCGTTTGGATTGGTGGAGTGGCTTTCTCTGATGAGGTCAGA
ATGCCTAACACTGTAACTCCCTTCAAGCTTCTCTTTTGAGGAAGCAATGGCGACAGCGTC
TTGCCAAGAGCTCCTCTCCCTGACAACACGATGGTCGGCATGTGCACCCGGCCTGAACTG
TGCTTCAGTCGCGAGAATGCGCTCACCGAACACAGCGACCGCCTCCTTGACAGACCGGAA
CGCACGAGAGGTGTCGACCTCTGCACGGCCAGACGAGGCGGCAGCCATGCTGCAGTGGCT
TCCCACCAGGCTATGGAAAATGGAAGCAGCAGCTTTGCAGGCAATGGCTTCCCACGAGGC
TATGGAAATGGAAGCAAGAATAAGCTCCTGGAGGGGTTTATGAAGACCATCGATCAAAAC
AGCTGGCTTGCTTTGCTTTCACTGCAAAATGGCAAGGCCATCAAGCAAGAGACAAGACTA
GCCACCTAACCTAATAGAACCCTTCAAGTAGAGATGAGTGGCAGTACAGCTGAGCTGAAG
CTGGAATACTTTCCCAGCAAATTAAGTAAGGTAGTAGTATCTGCTGCCCCAGGAAAGTAC
AACAAGTCAAAATATCTGATAGCCGACTATGGTGTGATGAGAGTAGTTGGGAGAACTCAT
GGGCCTTCACTTGTAAAACAAACATCCATCAAATATATTAGGTATGGCACCACATTTCAC
CCGTCTTCTGATTCTTCTTAAGCAATTTCATCTTCGCACACTTGCAGGTGCAAACAACCC
GACCAAGCTCGCTATTTCTTGTCTCTGTGTCGCATCTTTTAGTAAAATTGATATGCTCAG
GTTTGGGAACATACAGATCAAATAATTCAGAAATCAGTGTGGATCCAATAAAATGTAACC
ATATTGATGATAAAGTTCAGTCCATTTCTTTGTATTCAAAGGTGACAATGACATGATCCA
TTGTACTTGTACATCGAGCTCAACGTAATCAACAATTAACAAACACTCAGGTAAATACTC
ATGCCTGACACCTATCTGAACAGAAGGTAAAAGGATTATTGAGAAACAAACCAATGGGGA
GAAAGTAACAAGGTTACCTGATACCAACAAAGCCGGCAACTTAAGTAACTATATAATTCA
CACCACCAACATGCTACACATCTACTGACAAGCATCCTATGTGATTGTCTCGGGGAAAAA
GAATCACTTGGTACGTCTAGAACGTAAGGTCCTTGGGATCCTCAATTATCTTGGACAGAG
TTTGCAGAAAGGCGGCAAGATCAGATCCATAAATAACACGATGATCAGCAGTAACGTTGA
CCTAGATTTATTGATCAGTTCAGGTAAGCACAAAATCATTAACTTCAAATTGGTTGCTGC
GAAAGCATAAGTGCCAAAACTACAATTAATTTTTACCTGCATTTGGCACTTGATCCCAAT
TCTACCATCTTTTGTACCAACAACTGTCGGTTGTGATGCACCAACAGCCATGATTGCTCC
CTGTTTTGAGGTATAACTTCTATTACCAGAGGGGTGTGGTGCATTACATGAAAACAAAAG
TGGAAACATGGAAAGTTCATCTTACAGTTCCAGGTGGCAAGATCGCATCGAATCTATCAA
CTCCAAACATACCAAGGTTTGAAAGAGTGAAGGTACCTGCAGAGTGAACACTGACCGTTA
TTAGCATACATGGACATATACATACAGTTGGATCCTACAAGTTTCTTGTGCCCAACATCT
AAGCACTACCAAAGAAAGGAGATGGTCATAGGAAGCTTTGTAGCTTCGGTAAGTTTATAT
GTGACCGCTCAATTTTTGGCTAAGATACTTTAGCCATGAAGTACCATATGATTTTAACAC
GGTACACATAGCACAGCAAAATGCGGATAAAAATAATTCCAGTGCTTTGTCGTGTGAATT
TTAGCAATCCAATCAGATCTCTTCAGTGCAAAAAAACATGCAGTCCACAATCTACAGTTG
GACGGAACTGAATCTTATGTTTCCAAACCATAAGAACAACCGAACAAATGCCAAATTATT
TTGCAAGCTCTGTTTCTGTAGCAGATGTATCCTTTTTGGCATAAACAACACCCAAGCGAA
CCTTGTATATGCAAACTAAGAACTATCATTGGCATGCAGCACGTTATATTTTTTTAAATA
CTCTATACAAAGCAAATACCAAGGAGGGAAGACTCAGGGAAGCTCGGTAAATAGATCATA
GCACAATATTAGCATAGTCTGGCACATATAACGTGGTGCCTCACCTTACCTTCTATTTCT
TTCTTAATAGACAATAAATTCTGTAAAGCACATTCATATAGCTATTTCTTCCAAATTAAA
CAATACAACTGTTTCAGACAGCTCTTGTTTTTCAGCCAGTCCAATAAGAGACATGACAGT
CCTGCCGTCCATGGATCAAATTATTTCGTGCACTGGATTTCACTTGCATGTCTATGATTC
CCTTGCGTGTGCTCGGGATAGGTGTTTTGTACAAATGTTTTGGCGTATTATTAAGTATTC
TCCTTTAGTTTTTTTCTCTATCTAGAAGTGAAATAGAATAACCTAGTTGACGGGTAATGA
TCATACGTCTGTAATGTATTGAATGGCCCAGAATAGGTCCTATTCTTCTACCTTTTCCAG
GTAGTCGATGGCTATTCACAGCTACCACCTTAACACCAAAGAAGAGTTCGACCCAATGCT
TTATTTCTGTCTTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCAATA
AACGAAGACTTTTTTCTGTAAATACTG