Contig Data
morexGenes
Links



Map Locations of contig_143654 (2309 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_143654

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_8501 1 817 bp MLOC_8501.1 Available Available None
MLOC_8503 1 1170 bp MLOC_8503.1 Available Available None
MLOC_8502 3 724 bp AK366659 Available Available None





CDS Structure of MLOC_8501






CDS Structure of MLOC_8503






CDS Structure of MLOC_8502






Contig Sequence (2309 bp)

>contig_143654 2309 assembly3_WGSMorex_rbca.fasta
TAAGTCTTTTAAGATAGTTCACTAGGAGTCTACATACGAAGTAAAATGANNNAATCTACA
CTCTAAAACATGTCTATATACATCCGTATGCAGTCCACTAATGAAACCTCTTTAAAGNNN
NNNNTTTAGGAACGGAGGGAGTACATAATACAAATGACAATTTTCAGTCAGCTAACAATA
TGAACTTAACAGTAAGCAGATAAATTAGCATAGATAAGCTTGTACAATTTTCAGTCCTTC
CATACAGTACAGTTTTCTTCAGATTTCTTAAGAGACAACAAGCCACTTGTCAATAATAAT
GTTCAGGACTGCATTTAGTTCGTCTGGAAAACAATCGTTCCATCTGGCTTGTAATAAATC
CGAGGTAGTTTTGTCCAGCTTTGCAGTTGCAGTGTCGTTGTTAGTTATAAAACTGGACTT
CATAGCAACAACCTTAATTAGGAAATGGCAGGGAAACCACAATACTAGGATAAAGAGTGT
CTTTTGAAGTAGTAGCTTCTATGCTTCTGTAGACAGTACTGTAGTTGCTGCTTCCATTTT
CAGAAAGCCTGATAGAAGTATTATAGAAGTGCATCACTCATCTAACCGGAGTTGGAAACC
AACCTGTCCTCCCGTTCTGTCCTGTCCTAGATTGAATAGTCTAATAAGTAGAGTTGAAGG
CCTGATGTACTCCATCCAGATTTTTCTAATGGAAGAAATGCTGTGCGCCCTATCTAAAAC
AACTCGGTCGGGTACCATTTGTGCCAAACACACAATGTTGGCACTAAAAAAGGTTTGTTC
TTCCAAGTAGTGGATCATCACATCCCCATCTCACTAGAAGAAGCTACTAATTGTACGCAT
AATGTGTAACTTTATCATCCCATCTGTATAGGATGTGAATGAATTCAAAGAATCATGTAA
CTTTATCCTGCTCTTGGTTTTGTTAGACATGGTTCTCTCGATTCTAATTTCTCAGCCGAG
GGCAGTTGCTTCCCCTGGCTGCACGACAGTGGTAATTCCCATCTGGTCTGACGATGCTCG
TGGAATCTGTAGGTCGTGGATCACACCACGCACCACTTCAAGGAGCACGACGGCGTAACC
TTTACGATCGAGGACTGAGGACCCAGGCACAACAAAAAAACGGGTGCGCCTCGCTGATGC
TGTTCTTCAGCCTTGCCTCTATGTACTCTTTGACGTGTGATGAACATGAACATCCAGTAT
GTATGTATGTGCAATAATCTACTTACTGCAAGTCATTTTATACGTACTTACGTACGCATC
AGCTGCTCGGTGAGCGTTTATTATTTGTGTCGTTGTTTCTGGTGACACGCATCATAACGC
CAGGCCGAGCTGTGCGGCGCCGGCCATGCCCCAGCGAGCGGCAGCCGGCCGCGCCCTGCA
CATGGGCGGGCGGCACGGAGGGCCGTCGTGAATGCGTGACCACCGCCGGGCCGGGCCCTC
CCTGCGCGCTACACGTGTCACCCTACTATGCGTCCACGCCATGGTGGGTGCAGGCCCCGT
CGGCATCCACGTCTGCCCGTCCGGCCGCCGTAGCGATAGTTGGCGCTGGCGCATTGGTCA
GAGAAAGCAAACACAGCACCCATGCCGATTACCCGCCTCTCCAAATTAATTAGCAACGAC
TTTATATTAAGCGCACGGCGCGAGGTAGCAAAGTACCCCTCCCTGTCCGTCTGCTCGACC
CGATCAACTCAACTCGTCAGCAGCAAGCAACCAACCGCTCTTTTTAGCCCCCGCTCGCTC
CACCCTCTCCTCCCCCTCCCTCCCCCACTCCGGCCGTCCAGAAAGCGGAGTGCCGCCGTC
GACGATCGCCGTCCGTCCATGGTGAGGTCCAACTCCATCGACAGCTGCTACTCCTCCATC
CAGGACGTCACCTACAGGTAGCCTCCGGTTCCCGCTCCACCGGTGCTTGCGTCGTGAAAC
TAGCTGGCATGATTTCGGTTTTTCTGATCCGCTTGCCGCTTGGCTTGGTTCCTCCCGGTC
CACCAACGGCAGTTGCGGCTACTGCGGCTACGCGCTGAACCTGAGCTCGGCGGCGCGGAA
CACGGCGGGCATCGGCTCCAAGTACGGCAAGCAGATCAGGAAGAAGGGCGTCGTCGCCTT
CGTCGCCGTCGACGAGACACGCTTCACGCAGGCCGACGAGGTCACCTGCGCGCCCCGCCT
CCGCCCCTGGACCTGGCGCCTCTTCCGGCGGAGGTCGCGCCTGCTCTGCGGCAAGTGCGG
CGGCCGCATCGGCGCCGCCTACGAGGTCGATGAGGACGAGGAGGACCCCGCCGGACTGTC
CGCGTGCGCCGGCTCGGACGACGACGACC