| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_143646
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_8500 |
10 |
3694 bp |
None |
Available |
Available |
LOC_Os09g28770.1, FRAME:+2, EVALUE:1e-92, 13109.m02839 protein patatin, putative, expressed |
CDS Structure of MLOC_8500
Contig Sequence (4115 bp)
>contig_143646 4115 assembly3_WGSMorex_rbca.fasta
TCTATTGATTCTCTCCCAATTGGTTGGATCGTAGAGGCGTCAGTGATGCCAGCAGCCAGA
CAACAGACTGAGCTGGAATGTAGTCAGGATTAGCATATCAGGTAACTGCCATGCTGCATA
CCTTGCGGATAATGTAAGGGTGTATAATTTTCTTGGGATACATATATTGGGCTTACTTCA
AAGCAATCACTTGACTCATTACAAAACTAACTACTTACTGCTGACATGACGATTTCTCCT
TATGTGGCATTGAAGTGCCATTATTTTTTATTTTGAAACAAACAGGCAAAAGCCTTGCCT
GTTTATAGTAAAAGAAGTGTTACAATATGTACAAGGGTCTCTGGCTACAAAAGTAAGATT
TGGTAACCCTAATGGCGTCTGCAATGCAGAACTGTACTTCTAGGAGCAACTGGCTGCAAT
CAGTTCTACAACTGTTTCCAGTACATCGCATGATCCAAACTAAGAAAAATGGGTGATGTC
ATCAATATTTTCTGGGAGCCTCCACTCTTCCAGTGTAGTGAACAATCCATGTGACGTCTT
CCTCTTCTCCAATGGTAGGCAATTCTCGTCGTCTCCAACATCTTCAGCCCCAAAGAAAGT
AAATAAATCATCAGCAGCATATTGGAGGCCGCACATATATGCTTCCAGCTTCTGAGCATC
CTGAAGAGTTTCTGCCATGGTACCTGCATGCCAGACCACTTGATTATCCGAATATATAAA
TCATTTCTCATCTTCCAGAGAACCCACACCAATGCTGAGGATATTGATGTTAACTATTAC
TGGCATGCCATGTATTATAACTGTTTATCTTGACATATGCAGTGAGTTTCCATGGTTCAA
TCTGACTACAGTTTAATCCATATAAGCTTGCAGTACCAGTTGTTTTAATATTCAGTCTTC
ATATCCCATGTACTGAAAGCTATGTGGTAACTTCACATTGTTTTATCTGACTGCAATTGC
ACAGTTACACCTATATAAGTTTGCACAATGAATTGTTTTTACTTTTGATCTCCATCTTCC
ATATATGAATCAGAGAAAGCGTGCCTAGAAACTAGCTTATTTGGTGACGAAGAGAGGTAA
GTTAGGTTTATCTGAATTTGGTAGATAGTTTGTTGTTTTGACTTTTTTTTTGTACAAGAG
ACAAATAGTGTTATGTATAGAAGGGCTGCCTGGTTCATGTAGCTCCTGCTTGCGGAGGGT
CCAGGGAAGGGCCTGGCAAAGAATATTATGTATCTGATGCAATAGTTTGTTCTTGAATGA
ATTACTTTGGATTTGTGATAAGTATTTTCCATCGTTGTCATTCATTTGTTTTCTTCCTCC
GGGAAATCAAATGAATATTCTGATATTTATTTGTTCACAGGGTCTCAAATCTAAATGTTT
TTCACATTATGATATGTTTGTCTAATTACATGATATCTTACTTGACGGGCTACATCACCT
TTCCTTGCACATTTTACTTAGCCAAAGCTGAACGTTACACCATATTTCTCAAATATAAAA
GAAAAGAAAATGGTTGAAGACTCTCATAAGTTCGTCGGATCTAGATAACTATCTTCTGTG
CTTAACTAGGATATCGTTTGGATACAACGTGATTGAGAATACGTAATCAATGATGCAACA
ACCATCCAGCTAAAACAAAATTGGCACAAATTGAATGGTAGCATGTTTTTTTTCCCATTG
CTGCATACTGCCTAAATTCAAATGCTTCAGCAGTGCAGGTTCCTCTGATGTCATCCTCCA
AGGGCATGCCTAACATATCCCATTTAGGTCAATCAACCTGTACTAGTACACAGATTGTTC
ATCTTATTACTTAGATTGCGTGCATCACAAGTATGATCATACTGAGATAGAGCACAAAGC
TAAGATGTATTAGCTCCATGCAAGTTTAGGTCAACTTTCTAACATGACTAACACCTGGGT
CATAGAAATTTCCTTTTCCTGGCAGCGCCTTCAGGGCACTAGAATAGCCCCTAGTCCAAG
GGCAACTGAGAAAGAGACATTTGTCCTTTTCGAAAAGAGGAGATATACACTGCATTCGAA
CCTCATATACTAGCCTCTCAATCATCACTTGACTTTCCATTTTGAGAAAATAGATTTTTT
GTGTGTTTGATGAGAAAATACTCCCTCCGTAAAGAAATATCAGAGCGTTTAGTTAGTGAT
CTAAACGTTCTTATATTTCTTTACGGAGGGAGTACAAAATAGGGCATTTCAATACATCAT
TAGGTCTATATGGGTAAAAGTTTCCTTCAAAGCACGTTACCTACTCAGTAGTCACTGTTA
CCAAGGTTTCAGAAAATGAAGCGTGCACTTTTGCAACTTTAATTCTACATATCTTCTCAT
GAATGAAGGTTAGTAAGATTTTATTATCGCACGTTTAAGTTATTCGTAATGACTTTGTCC
TGAATGCTATAGACCTTCACTACCTGCATTGCCACGAAAGTTCTCATCCGAAGTCTATTA
ATATGTGTTCTCTACATTAACTTGAGGGCTCATATCGCCATCCTCGGAGAACTACAAATC
TTTGCAACCTATCCTTGAAGAGAACACAAATATGGAGACTGGAAAACATATCTTGTGCAG
ACACCCACCAACTTATGGCAACCTCATCACAATTCTTTCTATCGATGGTGGAGGGATTCG
AGGACTCATTCCAGCTGTTGCTCTTGCCTTTCTAGAATCAGAGTTGCAGGTAAACCTGTA
GTTATGTACATAATTGATTTTTGTATCTTGTGATGTTGGCATATTGCCATGGCAACAGTC
ACCTGGTGAGAAATATAATAGATTACAAGTCCATGTTCCATATATCGCGTTAGATGAAAT
AAGCTTGCAATTTGGTTGTTTGGTTTGTTTAAATTCAAACTGTCAGGATTTAACTCAATT
CACTAACCATATCTTGTTAACTTAACTGTAAAGTAAAGGTACTTCCATAACCCAAGTAAA
TCTTAAACTTTGTATTAGCGTCACAATGAGGGTGCTGTCTTGTTGTTGTCTGCTCCCTCT
TCTTTTATTGTTATTTATGCACATGTAGATGTTGAGCAGAAAATTCAAATTCTTGGCAAA
TTGGATTTATTTTTTGTATTACATAAGTTCAATATTCTGCTAGTGTTAGTTCTGTATTTC
TGGTTCTTTTATCTCTTCCGGGCTCGTGGGCTGAATATACTTGACGTGTAACAATGATTT
TGTTTCCATCTGCACCAGCAGATGCTCCTTTCTTTAGAAACACATTGATTTTTAATTGAT
GCTCTTGATTGCATCCCACTGAAACTGTTATGTTAACTTCTAAAGAAACTTGATGGAGCG
GAAGCCCGGTTAGCAGACTACTTTGATGTCATTGCTGGGACCAGCACAGGGGGACTTGTG
ACTGCGATGCTCACTGCACCAAATAAGAAGAGAAGACCACTTTTTGCTGCGAAGGATATT
CAAGCATTTTATATGGACCATGCTCCCAGAATTTTCCCGCAGCTCAGGTGAACACATATG
TTATGTTTTTCACTTCTTGTTGATTGAATTGGGAACTTGTCCAGTAACACATATTTTCTG
TTTTTTCTAGGGGTGCATTTGGTAGGATAATGAGGATACTTCGCTCATTGTCAGGACCTT
GTTATGATGGCAAGTACCTTCATGAAGTTGTGAGAAAGAAGTTAGGAAGCGCCAGGCTGC
ATCAGACGTTAACAAATGTGGTAATACCGACTTTCGACATCAAGCGGCTACAACCAACCA
TTTTTTCGTCATATGAGGTTTCCCTCTTCCCCTCTCGCTCAAATCTTTTGGGAGACCTAA
TTTGTGTACCTGTAAAATATGGTTGATGTTTCTTTGTATTGGATGCCAGTTATAGTAAAT
CAGAGCCAATTCACTTTAATAATGGTATAAGAAACACATGCTAATGAAATGCATATTTCT
TTGTTTTCGCTGTAAATTTACTTCAAAGGGAGAACATATGTATGAAGCAGAAGTGAGAAG
TCGAGAACTTCCATTAATCCTTCATGATGGAAATTTGCACAAAAATGAACTTTCTATTAT
CATGTGACAGGTTAAGAAGAAGAAGAAGAGCACAATGGATGCTTTGTTATCAGATATTTG
CATCAGCACGTCCGCTGCTCCAACTTATTTGCCTG
