Contig Data
morexGenes
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Map Locations of contig_143517 (4764 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_143517

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_8487 1 3829 bp MLOC_8487.1 Available Available LOC_Os02g38480.1, FRAME:+2, EVALUE:0.0, 13102.m04234 protein expressed protein





CDS Structure of MLOC_8487






Contig Sequence (4764 bp)

>contig_143517 4764 assembly3_WGSMorex_rbca.fasta
CCCCCCCGGCCCCCGCCCCCACCACCGCGTACTCCATGCCTCCTTCCTTCCCTCCGCGCT
GCGCGATGCGGCCGCCGGTGCCGTCTCTCTCTGTGTACCGTTTCGCGTTAAGTGGAAGCG
CAGGTGCAAGAGCGAGGCTGCATCGCAGGAACGCTCGATTCCTGCGTTCCTCTCAGCCTG
GCTGAGGGGCTTGCTTTTGCATCAGCTGGGCCAGGCTGGGGACGCCCACAGGACACCAAA
CAGGTTAGATTTTGCATGCCCAGTGCGATGCAGATGCGAGCAGAGAAACCAAACACGCAC
TTAGTGAACCATAGTCTGGTTGGGCGGGGCCCTCCAGAAGTCATTGATCTTACAAGGAGG
ACTTTAAGAAGAACCATGAGTAATACTACAATACAAGTTTTTAACCGTAAAATAGAAAAA
TAAAAATACAGAAACCTGCCCCTCCCCTCTCGAGTTTTTTTTCTCTTAACTATCGGCTAT
GCTGACCGCGGCCTGGTCTCTCGGGTGACTCCCTGTGGCTATCTGTTTTGTGTCCTACCG
AAACGTCATACAGTGGTCAACGAGTGTTCACGAATCAACAAAGTGCCCCAACGTCGCACG
GAAGCCTTGACCGACAGGTGGGCCGTCGTGGTCCTACCTACTCCAAGAGGCACCGGATGT
GACAAATCACCGCCCTACTCGCACTGCCACGTGAACCCCACTTGTCAGCTCGGGGCCTTC
CGCAACCTTCGCAGCTCTGCTCCGCGCACCCCCCGATCGGGCCCACGCGCCATCGTCTCC
CCCAATTCCTTCTCCCTCCTCCTCGGCGATGGTTTGATCGGATCCACCAGCCCGATCCGG
CCCAGATCTGGTGCCGCCATGGCCGACCACTCCGACTCCGATTCCTCCCCCAAGTCCTCT
TCCTCCTCGTCCTCCGCCCGCCGACGCTCCCCGCCGCGCGTCCGGGCACACTCCGACGAG
GGCGGCAGCAGCGACGGCGTCCTCGTCGAGCTCCCCTCGCAGGTATCATCACCACCGCAG
CCAGTTCCAACCGCTCTGCCACCTCCATTTTGACACCCGGGTCCACACGAACAAACGGAA
CGGCTTACGGAACCTCCTGCCTCTGCACCGTGTAGGATGCGCGGAGCCCCGGGGCAGACC
CAGACGCCGGTATCTTCGTCAGCATGCCCGCCGACGATGCCACCAGCGGCGAGACCTTCG
AGGATGCCCCTGACGACCTCGCAACCGCTCGCTCGCTCGATGAATCCATCGCAGTCATCG
ACTTCCCGGACGAGTCTAGCGCCGCTGCCGAGTGCCGCAAGTACAAGGTATTGCTTCCTT
TTGCTTTTCACACTAGTTCAGTTCGTGTTATTTTGCACGTGAATTGCGACCTGCCAGCTC
CATTCTCTGCCTATAAGATGACGCGAACTGGGCTTGGTTCAGGAAGAGAGAGATGTGTGT
GCACGGGAGGCAGCGACGCTACGGAGAATGCTACAGGAGCTGGTGGGGCGGGAAGTGTCA
AGTTCGTTGCATGCAGATGATCCTGATGAGAGGGCACCACTGCACTTGATGCTGGATGAT
TGCTCCAGACTTGTGCTTGAACTGAATTCAATGGTGCGTTCCAGGGAGGAGGAGGTTGAC
AGCTTACGTGCCAGGGCTGCTGAGGTTCAAGTGTCAAAAGAGGTTGTGGATGCATACCTT
GGTTCGTGGAGGCAAGTTTCAGAACTAACAATTGGGCGAATGGTTGCATCGCTCGATGCC
GTGGTTGGGAAAGATGCCCTCAGTTTTGAGGGTGCTGATCAAGACGGGATATCTGCTGTT
GAAAGGAAGACTTCGTTGCTAACAGAGCGGTACAGGCAAGCTTTATTGGGCATTGAACAA
CTCGAGCAAGTGTTGGCAGAGGTTAAGCCTGGTTTTGTGGCCACGGGTCAATGCGATCAC
GCCACTCTTTTCGGTAATGTTTCAGAGGAATTGGTCAGTAGCAAGAGAAACGAAGCAAAT
TTCATACAAAAGTTGAAAACTTCCATGGAAGAAAACAAAATCCTTACCGAAGAGCTTGAG
AAAACGAAAGCTGCTCGAGAGGTAGCAATTGCTGAAGCAGGCAAAACAAAGGCAGAAATT
GAGCAGATGGAGCATAAATTATCAGCTACTAAAGAGAAGCTCACCATGGCTGTCACAAAG
GGCAAGTCGTTGGTGCAGCATCGTGATTCCTTAAAGCAGACACTGGCTGAAAAAACAGGT
GAGCTGGAGAGGTGCATGGTGGAATTGCAACAGAGGTCTGATTCCTTGCAAGAATCTGAG
GGCAGGATTGAGGAGCTTAAGATGTTGCTAGATGAAAAGTCAGTGGAACATGAGAAATGT
TTGGACGAGCTTAGAGAAACATACAACGCATGGGAAGCTGCTAAGGCAAGCATTGAGCAA
TTAAATGACGCAAACACCGCACTTACAATAAGTGATGGGGTTCTTCAACGCATCGGAGAG
GTTATGTCAGAGGCAACATTTCCAGAGGATCTGCTTTCCTTGGAGATGATTGACAGATTG
GAATGGTTGGTTGAACAAAAGAAAATTGCTGACATGGTCTTCTTGGAGCACAGGAAAGTT
AAAGATATTCTAGGCTCGGTTGACTTTCCACACTCAGTCTTAACTGGTGAACTTGATTCA
CAAATCACTTGGCTAGTCAACTCACTGGGCCAGGCCAAAGATGATGCGGTGCGGATGCGG
AATGAGTCTTCTGAAGCTCTTCATAGGCTGTCTGCACATGAATCAAAACTGGTCTCAATG
CATGAGGAAATTGACCGTTTAACCATAGTTCTATTGGAAGAGAAGCAGGAAAAGGACATA
CTTGCAAATGAACAATCTGAATTAATGTCCCTATACAATGCTGCTGTTGATAAATTATCT
GTTATCTCATCGCAGAATACTGAGCTTGTAAAGGCATTTGCAGAGGGTTCTGATGTCAAA
TGGGAGGACAATGAGCCCCTGGAGACTACCAAATTGGTGGAGCAGTGCCTAAGCAGCATC
CAGCGAAGAGCAAAATCCTCTCCTGTTGTGTGTGAAAGTGTAGAGAAGTTACAAGCACTA
GTGTATACCCTACATCAGGAATTAACACTTTGTAAATTAATTCTTGAAGAAGACATGACT
GATAGATCTGAGAGAATGAGACTATCAGGTGAACTACAAAAAATGACAGAGGCGGTTTAT
GTTTTGAAAAATGGAAAGGACTCGTTACAGAAAGAGTTTGAAAAGGTGGAGGAAAAATCA
TCGTTGCTTAGAGAGAAGCTGTCAATGGCTGTGAAAAAGGGGAAAGGTTTGGTACAAGAG
CGTGAAGGACTCAAGCGAGTCCTCGATGAGAAGAACTCTGAGATAGAGAAGCTAAAACAT
GCTATTGATGAAAAGATCTCTGAAACAGAGAATGTAAAACATGCTTTGGATAGGAATAGC
TCTGAGATAGAGAAGCTGAAACATGCTTTGGATGAAAAGAACTCTGAGCTAGAAGAGCTC
AGACATGCTCTGGATGAGTATAACTCTGAAACAGAGAATCTAAAACAAGCTCTGGATGAG
AATAACTCTATATCAGATAAGCTAAAACGAGATCTGAAAGCAAGGAACACAGAAATGGAG
AATCTGAAATATGAGATAGTGTCAAGGGAATCTGCAAATACTGATCTCAGAGAACAAGTC
GAGAGTCTATCTTCTCAGGTTACACATTTTGATAAGCTGCAGTTGGACATTATTTCCCTT
AGTGAGGAAAAGGGTAAAGTAGATAACATGTTCGAAGAAGCTAAAGTTTCCTTGGACATT
CTAGTTGATTCAGTATCAAGCATGGCTATTCCTGTCGATCACCCCTCTGAGGACCCTGTG
AAAAAAGTAAGCCAGATCGCCCAATTCATAATGGAATCACAAGCTGCTAAGAATCATCTG
GAGAATGAGCTACAGAGAGCACATGAGCAAGTTACTTTGCAGGCTGGCAGGCTTTCTGAT
TCCTATTCTTCTATAAAGATATTAGAAGATGAGTTGAGTAAATTAAAGGAATATGTTTCT
TCTACTTCTGAAGAGAAATACCAAATACAATTGCGTACTGCTGCTGTAGAGGAGGATTTG
GAGAAAACAAAAGAAGAACTGGCTCATAATGCCAACAAACTAGAAGATGCCAATGCAACT
ATTAACTCACTGCAAGATGCATTATCACAGGCTAGAACAGATGTTGCTAGTCTTAGTGCT
GAAAAGAATGAAGCTGGAGCCAAACATGAAATGGAAACTAGTGCTCTTAATGCTAAACTA
GCCAAATGTTTGGAAGAGTTGGATAAAAGTCATGTAAACTTACAAAGTCATTCAACCGAA
CATCATGGTTACCTTGAGAAACTTAGCACACTTGTAATGGATGATAGTATGGTATCATTG
ATGGCTGAAGAATTTGGAAAAAAGGTCAGCAGCTTGAGAGATATGAGCCTTATAGTGAAG
GGTATGCATGAACACCTCGCTGCAATGGGGTTCCAGATTGATCCAATTATGGAGGTAAAG
TGTTTTTATGGTTACATGATATTTATAAAAAGTATTTCTTTGATTTCTTTGTTCCGTGTG
TTGCAGTATGTTTACTACTACCTCTGTCCGGAATTACTTGTCACAGAAATGAATAATAAT
AGATGTATCTAAATGTATTTTATTTCTAGATACATCCTGTTAGGAATAAGCAACTTATAT
TCCCATGAGGCCATAGGCCGATATATATATACATGTACAGGTGATGGACTATATGCAGGA
AAACCCCTTATATATTGGGATAAA