Contig Data
morexGenes
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Map Locations of contig_141715 (3103 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_141715

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_8250 5 2899 bp MLOC_8250.1 Available Available LOC_Os03g58540.1, FRAME:+3, EVALUE:3e-19, 13103.m06429 protein spo0B-associated GTP-binding protein, putative, expressed





CDS Structure of MLOC_8250






Contig Sequence (3103 bp)

>contig_141715 3103 assembly3_WGSMorex_rbca.fasta
CTTCGCCAGTCGGAGCAGGAGGTGGCCGCCGCCTCCCCCGGCACCGCCACCTTCGAGTAG
GTGCGTGCGGCCGCAATGCCTCCTCCCGCCACCTTCCCCCCCTCTGTGTTCCCCTCGGCA
CGGGCGGGGACGGCACAGACACCGTCAACATCTCCACCGGTTCGACCATCCTCGCCGCTG
CGGCCGGCGCAAAGGTCACCAAGGTATTCTCATCTCTCGCCCCCCAACCTATCGTATTGG
ATTGCACACACGCGTTATGGACTGTATGTACTGAGGTGGTCTCCCATGCGTTTCTGCAGC
AAGGGAGCAGGGCGAGCTCGTCGGCATGCGGCAGCGCCGATGTGCTCGAGGTGTTGGGTG
TCAACATCGAGTTGGAACCCGAGGTACTGCCTGATTGGCCTCATGATCGCTCTTTTTCCT
CTGCACTTGCTTTTCGTGTGCCTGACATTTTAGTACTAACATCTATAGTACATTTTAATA
GAATCTACAGTCCATTTTTGTACGACTCGTAGTACCGCAAGGGGCGCCTCCTCCTACTGT
AGGTAGACTGTGATTTGTCGGATGAAACAACCATTGGTATCAAACATCACTAGATGTGTT
TCTTGGGAAGTAATCAGACTATCAGACCCACCTTTTGGTTGCTATGATTTGCCATCAGTA
CTGCAGAAGTAGCACGGGCATTATACCAGCCACCGTGTTTCAGGCAAACAGGACCACTCT
TTGCAAGCTATGCTCACGAGATTGAAATTTGAATGTGAGTTCGTTCGGTGACGTGACCCT
AGTAAACGGTTCATAGTAAATGTTAGCAGTACTGTTTACCATAAACAAAGTCCATCTATC
TACATATGAAGTGGTTGTAATTTGGAGGAACTCTGGGTTGTTGTTCGGTGTTGACTGGGA
GGACGAACTCCAGGGTTCTTCTTTTGGATCCAGGGTGCCAATGTAGTTTATGGTAGATGC
TTGTATGCGGTGTTTGCAGCTTGCTAATTATACATTCCATCTGTTTATTTTGGAATGTTG
AATGTTTCCCAGGAAGTGGTGTCGAGCTACTTCCGATGGCATATCGCAATCCTTGTGATA
TATTTAGCATATAGAAATTGAGTGTCACCTTCTCAAGTTAAATATAAAGTTTTATTTGTA
AGCCACTAAATGATCATATCAAACAAGGGTTTACCAAATAAAATCATATTTTCTTACACA
ATCACACCAATATGGGCAGGTAAATCACGGACTAACCTACTAGAATATTTATGCCCTCCA
TGGCAATGCACGGGCAATTATCTAGTTAACCGTAAAGAAAAGAATCGGCTTCTTTGTTTA
AGGAATATCCTGCTTGAGAGAGGATAGTTCCCCTGTGCCCGCATATTTGCTTTGCCATTC
GTTCAAATTTCAGTACTCACTAGTCAGTTGCTATTTCTTAGGTCCATTTAACAAAAAGTA
GTTGGTAAAAAACATTGAATAAGAGGAGCTGGGAGTATTTTAAATGGTTGGTGCCTTTGC
AGTTACAGCCAAGGAATACTTTCTGGTACAAGCAAATTCTTATTGATTTTTTACTACAAA
AGTGGATAAGGTTAATCAATTTGGTTGACCCACCTATAACATTAACTCAATCAGTAGACC
CACTATTGTGTCCATATATTTTTTGCTTTCAGCCCAATCTCACCAAGAACGAAAAATGAA
GTAGCGGAGCAATTCTACGAGGCAAAGCAGATATGCAGATGGGGCCCCTTCAAGCAGGTT
CATATGCGCACACCTTCTCTCTTCTCATCATGTGAGAAAAATCGTCATGTGGGATTTTCG
GTCGACGTGTATGCTTGGCCCGGCACTGCGCGAGGACGGGCGGTAACGTCGGGGCCACCG
GCACCCTCAGCTCTGGGATGCACAACGGCTTCGCCGGGGAGACGCTCAGGATACCCGTGC
CTGTAGGTTTGTAGGCCTCCAGCTGTGAACTGGGGGCATTTTTTTGCTCTGTGGCTCTGT
GAGGTTAGGTGATTGATTTAACTCTGATGATGCCTTGCCCGCTCACTGAATTGCATTGCA
GGTACCGTGGTGAGGCGCAAGAAGGGGTCTGTTCTTGCTGATTTGGCTCACCCTGGTGAT
GAGGTGCTTGTCGCCTGGGGCGGACACGGCGGGGTGAGTCAAGTTGTATCGTCGTGTTAG
AATGTTTAAAACAAAGTGATTGAATTTCTGTCTCCAAACGCGTACGTCACTTAGCAAACT
TTTTGACAACTACGCTAGGAGGCATGTGTTTTGCTTCAGCAATAGCAGACCAAAGTTATT
CCTCATGGATGGACATCACATATTCTATGCAGCTTAGTAACCATTTCACGACGATGTTTC
GGTTTTTGCCACTTGCAGTTGCAGGCAAACTGTGTAAACTGCTTTATAAGTATCGCAGTT
AACCAGTTTTAACATGTCAAGATGCATTTGGGTAGTTTCAACCCATTTAAGTTGAATCGT
TCTACCCCTGAAAATCAGAATTCCATATGGTTGCATGCTGGGAGCGAGAATATAGATAGA
CGCTGAACAAAGACTAATGTATTTAGCTAAATATAGTTAGTAACTAGTTCATGATTTAGG
AAACTACTGTATTTGGCCAAGTACCAGTTAATGACTAGTTTGTGTTTTAATTGTTTGTCA
CAATTGTGATTACCATGCGAGCTTTATTAGATTGACAAAAACTGGTTGAAATCCACCTTA
TTAGGCAAGTATGTTTCCTGAACCTGAGGTGTCTAATTTGACGGAGTAACCTGTAAATTG
GCATCTTCGTATTAAATAGCTGCTTACTGTCAGGTGACTGAACATTGGGGGCATCACTTT
ATGGACATTCCACTGCTTTTTATTTCCTGTTTCTCAAATACAAAATAACTTCCTCATTTT
GGTGCATACATGTATCCCCATTGTTATCTTTATGATGATGTTTGTCACTAATATAATGTA
TTTACAGATTGTTCGCAATCACTAGTACCATCGATAACTATGCGTCGTTTTTGTTCTTCT
ATTTTTATTTGTGTACAGACTGCATNCAACTTAACATGTTGTCAGATGTGCTTTTCTTTT
GTTTCTAATCATTCTATTTTATAACATTCAGATGATGGCCTTC