Contig Data
morexGenes
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Map Locations of contig_141651 (4206 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_141651

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_8224 2 1108 bp MLOC_8224.2 Available Available LOC_Os06g40630.1, FRAME:+3, EVALUE:9e-127, 13106.m04226 protein SFT2, putative, expressed
MLOC_8225 1 1053 bp AK354068 Available Available None





CDS Structure of MLOC_8224






CDS Structure of MLOC_8225






Contig Sequence (4206 bp)

>contig_141651 4206 assembly3_WGSMorex_rbca.fasta
CGCGGGGCGGGGGGGGCCCGGTGGCGGGGGGGCGTCTCCGCGGCTGGCCCCCCGCGCCCT
CCTCGTCGGCGGCGTCTCCCCCGCCGCCGCCGTCTCTGCTCGCGGAATGGAACTCCTATG
CCGCCGCCCGCTCCGCCGAGGAGGATGTCGGCGGAGGATTCGGGATCGACATCGAGGCCG
CCGTCCGCTCCGCCAACGACCGCGTCAGCGGCACCTTCGGCGTGTAAGCAACCCCCCTCT
CGTCGTCACTCCACCTCCTCCTAGGGTTTCTGCAAGTGAATCGGGATGCGGTGGATTCTC
CCCAGCTAAGCTTAACTACCGGTGCCATGAATAAATTGTCAGTACCGTAGCGCTTCCCGG
ATCGCCTCCATGTGGATTCAGATTGCTTCGGTGCTGTTTACGCCAGAGCTACTATTGTAA
AAAATAGCTTCTTAGCATTGGCCAATTAGATCCTTCTTAGCCAGCAGTGTATTTCCTCCG
GTTATCGCAAAATCGTTATTGAGGATCGTTAGTCAGGACTCAGGAGCAAGTTTTTTTTTT
TGCTGAATTAGTCACTTATTAGGTATATACAATCAAGGAATCTATGTTTTGAAGAAGTCA
CCATCGTGATTCATGTTGTTATATGTGAGCTGTTTAGAGTCATACATATGAAAGCGATTT
GTTAATTGTTAGCTCTAAAGCAATTTGAAAGGCTAAACATCACCACAGCTCTTCAAGATT
AACTAGAGGAACAATCGTAAAAGATGACATTGACCGAACCTCTAGTTAACCTTTCTTTTA
GTTGTTTAGTTTTTTGCTGATTGCCTTGCCATTCTATTTTCTCCAGGGTATCCAAAGGAG
TTAGAGGGTTGCCTGGCAGCTTCCAGTCCTCAACAAGCAGTATTCCATCTGGCAAATCTC
TCATGTATTTCGGTCTTTTTCTTGCCAGTGGCATTTTCCTAGTTTTCATCGCGTTCACGA
TATTCCTGCCAGTCATGGTAATAATGCCTCAAAAGTTTGCGATCTGTTTCACGCTGGGAT
GTGCCTTCATCATTGGATCTTTCTTTGCATTGAAAGGGCCCAAGAATCAGCTCTATCATA
TGATTTCCAGAGAGGTATCAATTCATTTTCCTTGTCCTTAACTAAGCACCATTCGTGGGA
AGCACTGTTCAACAAAACTTGTGATGTTTTCTTCTGTCTTCTGTTAATTTCTATTTTACC
ACAAACTGCACATATTAGATTGTTTCCATCCAATTCTCTCCTTGAAGATTTTACTTAGGT
TATATTGTATATTGTAAACATTTTGCTGGGAGAGCATTTTGTACTTGTATTTTGCTAGTA
ACGATCAAACAATTCCTCTGCTTTGAAGAAAGTAATAAAAAAGAAAAAGAAAATACATGG
TTAAATTTAGACAGTAACACAGCATGTCCTTGAGGCATCGATAATTTGACATGTTATCAA
GTGAGCATCCAGTTGTGAAACATCAACGTGAAAAATGCATTGTCGATGATTTTCTGCCAA
TGGTTAAGCGCTTTTCTACAGAAGATCGAATGTGCGTAGTGTTTTATTGTTTTAAAATGT
GTTTTTAGATGATACCATACTTTCTTTTCACAAAATAATATGCACATTTTGGGTTTTATG
TATTCTCATATATCATACTTTTTTATTCCAACTGTTTATAGGGAACTTACTGGGTTGTTG
ATTTAATTAGTTCATATCTTATATTTTATCTATTTAACTTTTATTATATCTCGAAAATTA
ATATGATTTTGGTACATTTTCTGAAGCTGTTTTAATTTTTCCACAGAGGTTACCTTTCAC
CATTGGATTTGTTGGCAGCATGTTTGCTACCATCTATGTGTCAATGGTGCTCCATAGCTA
CATACTTTCTGTTTTCTTCTCTTGTCTTCAGGTGAGAATATCTCCTTTACACCCCCCAAT
CTCTTGTGCTGTTATCTTTTCCTTCTCTGGATGCTAGTAACAGGAACAATTTTGAAGAGA
ACTGTGAATTTGTATAGCATGTGAATAGGGCCATCAAACCCCCCTTAAAAGTTGCAGTTT
GTGGCATCGTTTATAGAGAACTTACTGGCGTACTGAGCATTCGGTCACTTCTATTAACTT
TCAAGCTAACAAAACCGTGGGTCTTCTATTTTTCAGATCCTTGCGCTGGTATACTATGCC
ATCTCATACTTCCCTGGTGGGTCTGCTGGAATGAAGTTTCTGTCATCTACCCTTGTGGCC
TCAGTGTTGAGATGCTTCGGGCGATGAGTTCACCCGTTAGTTGCTCTCGCCCATCTGTCT
CAGCCCGTGTTCAGCTCAGTGACATATTTTTGCTTTCTCTTTGACATGGAGAGAGTGCGT
CAAAGATGACCCTGGAGCTTGATTGTTCACTGATATACATGCATGTCCAACTTACAGATA
GTATTGATCCCATGGAAACTCTGCTCGATGAGACGCTTTGTTCATTATGGACGTGCGTGG
AATCGAAATTTAACATACAGACAGATAGTCTCTGAATTTAGCAACACCGCGGCATGCCTT
GCGTTCGATCTTGTATCATGTACTGCCTTGGTTACATCACATTTAGCATGCCGACTTCCG
GTAAATCAGACGACGATAACACCAAAGCCCTGGACTGCATCGAAATATCCAATCTAAATA
TCTTCCGCATAGCGAGGCCTCAGAAAATACTGAAAACATTGTTGTAGGGTACAGCATTAC
ACGTCGCGGTGGCGTCCCGCACTCTGTCACTCTACATACGCTGGAGACTGGACCGCATCT
TGCATATCCACGGCAGGGTGGGGAAATGAAATGCTCCCATGATACCTTGGTGCCAAAGCC
AGCAGGTTGATGCCATCCCTACGTTCACTCTGCATGGATAAAGTCCACATCGCCACCACC
ACTTGTTCAGTTTTTGGGACCTTGTCTCTCACGGTCTCGCCATAGCGTTGCGTCTACATG
TGTGTGTTGTTTAGCTGCGAAAATGGTATTCCTAGTATTTTTGTCTGGCCAGCAGGCGGA
CGGGCGTTTGGGTGGCGCGGCTCGCCACCCCTATCCCCCAACGGGTGACGGGCGCTGCGC
GAGCCAGTGGCCCCTGCATCACGGATCCCCCTCGCCCGTTCGGCATATCCTCCTCACGTC
CAGGGTTTATAAGGGGAGAGGGATAGCTCGCACAGCCACCTCACAAAAAGCGCGAGCACA
GCAGCCCAGCGTTTGGATTTTGCAGCCGGTCCCGGAGCCTCCTGACCGACACGGTCGCCG
CCATGTCTGCCTTCGTCGGGAAATACGCAGGTTATTGCCTTCATCTGTATGCTTCTCATG
CGCTCATGGCGCGACATGCTGATGGCCTTTTGCGTGTAGATGAGCTGATGAAGACGGCCA
AGTACATCGCGACGCCGGGGAAGGGGATCCTGGCGGCGGACGAGTCGACGGGCACCATCG
GGAAGCGGCTGGCCAGCATCAACGTGGAGAACGTGGAGTCCAACCGGCAGGCGCTGCGGG
AGATGCTCTTCACGGCGCCGGGCGCGCTCGAGTACCTCTCCGGCGTCATCCTCTTCGAGG
AGACGCTCTACCAGACGGCCGCCGACGGCACCCCGTTCGTCGACATCCTCAAGGCCGGCA
ACGTCATCCCGGGCATCAAGGTCGACAAGGGCACCGTCGACATCGCCGGCACCGACGGCG
AGACCACCACTCAGGGCCTCGACTCCCTCGGCGCCCGCTGCGCCAAGTACTACGAGGCCG
GCGCGCGCTTCGCCAAGTGGCGCGCCGTGCTCAAGATCGGCCCCGGCGCCGAGCCGTCCG
AGCTCGCCGTCAAGCAGAACGCCGAGGGGCTGGCGCGCTACGCGCTCATCTGCCAGGAAA
ACGGGCTGGTCCCCATCGTGGAGCCCGAGATCCTCACCGACGGCGCGCACGACATCAAGG
CATGCGCCGCCGCCACCGAGCGCGTCCTCGCCGCCGTCTACAAGTCGCTCAACGACCACA
AGGTGCTCCTCGAGGGCACCCTCCTCAAGCCCAACATGGTCACCCCCGGCTCCGACAGCC
CCAAGGCACGTCCCTCGATCTCTCTCTCTCTCCCTACTTCTTCAATCTTCATCATGGTCT
CCGTTTGCATGGCTGATCGTGCTCTGAATGGTCGTGTGCATAGGTTGGCGCGGAGGTGAT
AGCGGAGTACACGGTGGCGGCGCTGCGGCGCACCGTGCCGCCGGCGGTGCCCGGCGGGGT
GGCTCG