| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_141628
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_8218 |
3 |
661 bp |
MLOC_8218.2 |
Available |
Available |
LOC_Os09g28570.3, FRAME:-3, EVALUE:1e-43, 13109.m02818 protein zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed |
| MLOC_8217 |
1 |
346 bp |
MLOC_8217.1 |
Available |
Available |
LOC_Os10g29730.1, FRAME:+1, EVALUE:1e-12, 13110.m02549 protein retrotransposon protein, putative, unclassified |
CDS Structure of MLOC_8218
CDS Structure of MLOC_8217
Contig Sequence (2745 bp)
>contig_141628 2745 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGCAAAATTTGAACCAAAAGCAAAATGTGCTTGAATACAGGTCAGACTCACAG
AAAGAAAAATCAATCAAGCTGTTTTAGGTAGCTAGTATGCACGTATATATATATCCTCCC
GGTAATCGATTTGATGCTCTAGAATCAGCATACTTTACTGATAAAATTTATAAAAAGCTT
AATATATATAGTTAAAAAATATATTCACTTTTGGAAGGAGGTCATGACCCCCTTTGGCCT
CCAAGAGGCTCCGCCAGTGCTGGCAGGGATGTTTGACATTGAAAAATCGATCCGGTCCAG
CAAAGCAACAGCAATATATGCAAATTTACAATTAAGCCTTTTAGCCTTTTATTGTCTGTA
AATTAACAAACCCCCTACCCCATATTTTTGAGTTTATCATCACTGACACATTCCAGTCTG
ACATTCAGTTGGTCATGTTGTCATCAAGTGATAAGTGAACATAAGAGACATGAAACATAT
GTTTAGGACTCACTGGGTCTACAAACTAGTAGACCATTCGGCAGGTGACATTGCCAAGAA
AACCAGGTTCTGGTGATTTTCTACTGTCATGTCAACCATCTCTGCAAACCACATAAAGTT
TTGGCCAGCCATCGCTCATACAAATTGAAGCATCAATTCTTAGTAATATACTCATAAATG
TTTTGCATACAAATGCCCATTTTAATTTTAATCATTTAGAACATCCCACCTCAAATAAAC
ATTCAAAATATTCATTAAAGACCAAATAGTGCATGCAATAATTGTGATACGTAAAATATA
GAAAAATGTTGAAAGTACATGACATATTTAACTGCAAGTTTAAAAGTTTAGATGTAGTAT
ACCATTAATGATGTCATCCATCTCCAAGAATCCACCAGTTGCCTGTACTATTTTCTGATT
TATTTGCTCAGCCATATTAGTTTGAACAAACTGCATACCACAGAAAGCAAAATAACACTT
ATGAAAGATCATCATGGCCTTAGTCCCTTCCAACTGTTACTAATGAGACAAAATAATATG
CTAATTGTCTGGAATAGTGAGTTGGATAATAATATGCTAACTGTCTGGAATAGTGAGTTG
GAAAAGAATGTGCTAATTGTCTGGAATAGTGAGTTGGATTCTAAATTATACTCCAACCCC
TGCAAGTAGTGAATATCCTCAAATTTTCTAAGATGGAATTATCGATAAAACTTGGCATTT
GGCCCACTTAGTTGGTTTTGCCATTTTGCTAAACTACACGTCTATGCCATTCTATCTCAG
ATTAAATAAAAAAGGAGGATTGTGCAAAATTTTCTGTGTGAATGTTTGGTCCTGAAAGAT
ATCTGCCCCTGGTACTTGAGATTGCAACAGCTGCACTCTCTGGTAAATCTGGTGACTTTC
CAAGTTGATAGGATTTTACGTAGTGGAGAAAACAATGTGCTCTACTGTACCATTGTCAAG
TTAATATCTTGACAGACTATAAAACCCATCGGCAGATTCCCACAAGATTAGAATTTTAAA
AAATGCACAGCAATAGCTGAAATAATATGGCGAGCAAACTCAGTATGTGTATGTGGTGGA
AAAATAAATAAACAGACAGATAATAAATACTCCCTCCGTCCCATAATGTAAGACGTTTTT
CCACACTAGTGTAGTGTCAGAAAACGTCTTACATTATGTGACGGAGAAGTACATCATGAT
ATAATAACATATAATAACTGACAGCAATCATGCAATTCGTTAATACCTCGGGGCAGAGCA
CATTGACACGAACACCATGGCGTTTCAATGGAGCAAGTGATCGAGTAAACATAACAACAC
CACCTGACGAAAATGAAGCTTGAGATCACAAAGTGCACACATGATTCAAACTTATCATAT
GGCATAAAGGACTAGAAGTTTTTTTTTGGCGAGGGATAAAGGACTAGAAGTTAATACTAA
AACATGTAGCTAGCAGCAGCATTTAACATTCTATATAACCGAAACATGTATCTTGAACCA
TGTCAAAAAACAATTAGCAAGAATATAAATTTCAATAAACCAATATTCATAATTGGAATT
CATATGGACGCTGGCCTTGCATCAGCACTGTGATCTGCTGCCAGAGAAAAAAAGTAGAAG
TATACAGGATGGTGTATAAACCTTTTGTCCCGGTATATATGGGATCGGCGAACATAGGAT
AAAGGCCCGCAGCTGAACCAATATTGATTATGACACCAGGCTTCTTCCGGGATCGCATTA
TTTGACTCTGATGAATATATCCAACAGTAAGTTTCGTGCATATGGCATTTGCATGAAGTA
CAAACAAGTAACATGTATAACAATTGATATTATCTTTCGAATTACTCCAAGATAAATAAT
TAAAAAATCCTCTTCCGGCTTCAAAGGAAACCATAAGGACAGGCCATGTTATGACAAAAT
CATTTCCTCTTAACTTCCTCAGGTAATGGTTAATGGAAACAAATAAAGGGAAACCGGATA
CTTTCTTCTCTTAAATAACTGGATAGCAAACAATTAATGCTATGCCGATTTCTGAGTTAT
ATTACTTAATATGTCTAAGCAATAAGAAAGCATAGACAGTACTCAGTGTTACCATTGGTC
AAATCGGTCCTCAGCGCGATCCCAATCCACCAGATGCTAGCCCTGACACCCCCGAAGAAG
ACCCTGAAGCAACTAGAGAAGATCCAGCGCGGCTTCCTCTGGGCTGGCCGTGCGGCTGCT
CAGGGAGGGCACTGTCACATTAACTGGCGCGCGGTCAGTCGGCCT
