Contig Data
morexGenes
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Map Locations of contig_141204 (3283 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_141204

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_8115 1 1385 bp MLOC_8115.1 Available Available LOC_Os06g15170.1, FRAME:+1, EVALUE:0.0, 13106.m01678 protein 3-ketoacyl-CoA synthase, putative, expressed





CDS Structure of MLOC_8115






Contig Sequence (3283 bp)

>contig_141204 3283 assembly3_WGSMorex_rbca.fasta
GTTTCTTACCGGCCGCAACGGCCACCATCTACCTCATGCTGCGTCCGCGCGCGGTGTACC
TCGTCGACTACGCCGGCTTCCGCACCCCGTCTAACTGCCGGGTACCCTTCGCGACTTTTC
TCGAGCACGCCAGACAACTGCCCGAGTTCAACGAGCGCAGCATCCGGTTCATGACGCGGT
TGCTGGAGCGCTCAGGGCTCGGCAACGAGACTTGCCTGCCCCCGACGCACCACTACATGG
GGACGCACAAATATTGCACGGTTGACGCCGCCCGCGCCGAGTTCGAGCTCGTGGCCTTCT
CGGCCGTCGACGACCTGCTCGTCAAGACCGGCATCGCCCCCGACGCCATCGACATACTCA
TCGTCAACTGCAGCTTGTTCTGTCCCACGCCCTCCTTGGTGGACATGATCATAAACAGGT
ACAAGCTGCGGAGCGACATTCGTGGCATGCACCTCGCCGGTATGGGATGCAGCGCGGGGA
TGATCTCCGTGGAGCTGGCGAGGAACCTCCTGCAGGTCGCCCCCCAGGGCGCGCACGCGC
TCGTCGTCTCCACGGAGACCGTCACGCCAAACTACTACTTCGGGACCGAGCGCGCAATGC
TCCTGCCCAATTGCCTCTTCCGCATAGGCGGCGCGGCCGCGCTGCTATCGACGTCCCCGG
CGAAGGCCCGATTCCGCCTAAATCACGTCGTACGCACGCTCACCGGTGCGGACGACAGTT
CGTACCGGTGTGTGTTCCAGGAGGAGGACGGAGATGGCCATCGGGGGATCAACCTCAGCA
AGGACCTGATGAACATCGCCGGCAACGCCCTCAACGCCAACATCACCGCAATGGGGCCGC
TCGTCCTGCCGGCCATGGAGCAGCTAATGTTCGCCTTCTCCTTCGTCGCACGGAAGGTGA
TCAGCAGGAGAGTGAAGCCGTACATCCCCGACTTCCGCACGGCGTTTGAGCACTTCTGCA
TCCACGCCGGCGGCCGTGCCGTCATCGACGAGCTGCAGAAGGGCCTTAGCCTTTCCGACG
AGCAGGTGGAGGCATCGCGGATGGCGCTGCACCGGTTCGGAAACACGTCGAGTAGCTCGC
TGTGGTACGAGTTGGCCTACATCGAGGCCAAGGGCCGCATGCGCAGGGGCGACCGCGTGT
GGACGATTGGCTTCGGTTCCGGGTTCAAGTGCAATAGTGCGGCGTGGGAGTGCATCCAGC
CTGCGCGCAACGCCCATGGGCCGTGGGCAACGTCCATCCACACATATCCGGTGGATGTTC
CCGATGTTCTCAAGCATTAATTTACTGCTGCCTATGAGCCCCATTACGGCTAAAAAAGGC
TATCCGTGCAGATGTAATAAGGGTCTATTAGTTTGCCTCAAAATAAAATGAAATACGAAA
CACTAAAAATCTGAAGTCAATTTTTAGGCATGACAGATCTAACGTTTTTTATGGCAATTA
ATATCGGGGCGACGATATCAAGTTTAGTTTGAAAACACGGCAACCTTTTTCTTGAAATAA
AATTTCACCCCGATATATAAGATATAGCAACCACCCGATACAACAAAAATTCCACTGCTA
GGGCACACAACACAAGTATATGCTCAATAAAATAAAATGAAATGAATGACAACAGAGTCA
GATCGATGAAAACGATGATAATCCCGAACCGCTACGTCTTCCAAAGATATCCACCACACT
CCTACCACTTCAGACCACTTCATATCAAACAACACCTTCAAGAACGATCACGACGCTGAC
GACATTGCTGCCTGGATTGATCCTAGCGTTTCCTCAATACACTGAGGGGCGTGGGTGACT
GGGATACCCGACGCCCTTCAAGAAGGAAGGACGGCACCCACGGGCGTCGCCGCGTCAGTG
CCAGCCATGCCGACAGGGATTTCTCCTGTCCGTCACACACCCCACCCTTATTGATCTGTC
GCGCTCCACCAAACACGCCGCCCACCAACATGAGCCATCACAGTCTTGGAGACACCGCCG
CCGCCTTACCATGAAGAGTGAAGCGGGACCGACGGGTCCAAGAGGTAGCGGCCGAGAACG
AGAAGTGGCAGAGTCAGCAGCCACACGGGAGTGGACAGCCTCCACCGCCCTCCGCGGTCA
CCGACCAGACGCAACAAGGGGAGCACACCAGGCACGTAGGCCCGACCTAGCCCGAGATGG
CTCGTGAAGCTCGTGTCACCGCATTGCAATGGGTGCGCCGCCGTCTCCGCAACCCCTCGC
ACGAGCCACACCTCCGTCCAACGGAGTCGTCGCAGGCGTAGCCAAGCCATGCCCTGACCC
AGATGGGGCCCCAAAGGGCCCAGACCGCAGCCAAGTGGCTATGCCACCGCCTCCTCATCA
TCCGGAGTTGTGCCTCCCGAGGTAGCGCCGCCATTGGAACCGCCGCCGTCTGAGGTGCAC
CTCCTTCATTTCTTGCTTCTGAAGTTGTCTCTACAGCAATATGTAGCTCCTCCAACAACT
TATATGTGGAAATGATATAATTTCAACACTTTTCTCGTAACCGTTTTATTCATTACTATA
GATTTTCTCTTCCTCGGGAAGTGGAATTTTTTTCAAATAGGGTAGTCGCCATATTACGAC
ATCATTTTCTTCATTTTATAGTTTGCCACTACTCTATGTAGCAGTATGTGGCTCCGCCCT
ATGTAGGAATTATACATCATTAGCATCATTTTCGCATCATCTTAATCTGTCACTTTAGAT
TTCCGTTCGTCTAAAACTGAAAATTAATTTATATTATATGGCATCGTCGACAGATAACAG
TAGCCTTTCGACCATTGCAGTATTACAGGGTAGTTTTTCTTGCATGATGTACCTCAAACA
ACAAGTTACATGTGGAAATTGGACAATTTGTAATATGTTTTGTTCCATTTCGATCCATCA
TGGTATATTTTCTCTTCTGTGAAACTGAAAGTTGCTTAAATAGCGAAATCGAGATATGCT
ATTAGTCCTGCTTCATTTGTTGATGTCAAAGTTGTCTATGCAGCAGTTTGTAGCTCCTCC
AAAAACATATTTGTACAACTGTTATAATTTTAACACATTTACATAACCTTTTCATTCNNN
ACTGTAAATTTCCCTACCCTGTAAACTCGTACATTTTTAAAACAGGGTAGAAGTCATATT
ACAACAACCTTTCCTTCATTTCTTGTTTCGGGATTAGTCTCTTCAGCAGTATGTGGCTCC
TCTTATATAGGGATCATACATCTTTAGCACCATTTTCGTACCCTCTTGATTCATCACTCT
AGATTTTCAATTCATGTGAAAATGAAAACATATTTATATAGCA