morexGenes - Barley RNA-seq Database

Contig contig_141143
Source Contig contig_141143
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_141143 (6146 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_141143

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_8100	1	637 bp	AK364086	Available	Available	None
CDS Structure of MLOC_8100

Contig Sequence (6146 bp)

>contig_141143 6146 assembly3_WGSMorex_rbca.fasta
GCCGGCGTCCGGCGCGCCGCCGGCGTCCCCGGCCCCGGAGCCGGAGCGCGAGCTGCCGGC
GAAGCGGGCGAGGACCGAGCCGGAGGACACCGACGAGGGCATGTCGGCACACCCGGCATC
CGACTCCGACTCCGACGCGCTGTTCGACGCCCTCCTCTTCGCCGACCAGTTCGCCTACTT
CAACGGCGGCGCCTACGAGTCCCTCGACAGCCTGTTCAGCGCCGACGCCGTGCAGAGCTC
CACGGCCACCGCCGCGGGCGAGGCGGCCATGGGGCTCTGGAGCTTCGACGACGACTGCCT
CGTCGACGAGTGCAGCCTGTCGTTCTAGATCCTGTTCCGTGTGCGTCCCTTCATGCCATG
CGATGGTGTGTGTGTAAATAGAGTAGTTTCGATCTTGTGGAATCCGTTCGTTCGTCGTCG
CTTCTTGGATCAGCAAGTGATGGTGGGTACTGTGTAAGAGTTGACATCCTTGTGAAAGAT
TTTGCCTACGCCTTCGGTGCAAAAGCTCGACTTTGGTTTCTGAATTGTTCTTCAAATTGC
TCTTCTTTTATCTGCACTGCCTATGTCATCAGCGAAATGTACAAAATCACGGATTTGCTT
GAGGCGGATTGGGCTCCAAAAGAAAAGCAAATGGGATCAACAAAAGTTGCAGGCTATCCC
TGCCCTCCATTATCTTTTTGAGCGTCGCGCTCGGATCTCCTCCATGCCGTGCCATATCGC
AGTGTTGCGACAGGACGGGAACCAATTCAACAAGAGCCCATGCCGTGCAGCTCGTGTCTG
TCATTGGCCCTGTTTGGATTTTAGATTTAGAGTTGGTTAGATTGAATTCATCTAACCCTC
AAAAACCCAAACAGATGGATTAGAGTTGGTTAGATGCATCTAACCCATCTAAAAAATCTA
ACTCACCTAAGAGGTGCTTTTTTGAGTTAGAGTTAGGTGGAGCCCAGAAAAAGTTACTTT
TCTTTCTCCCTCCATCATACAAAATCCTACTCCCTCCGTTCCTAAANNNNNNTCTTTGTA
GAGATTTCACTAGTGAACAACATACGGATGTATATAGACATATTTTAGAGTGTACATTCA
ATCATTTTGCTCCGTATGTAGACATCTATTAAAATCGCTTAAAAGACTTATATTTAGAAA
CGGAGGGAGTAGATAAATGAGCCAAATGATTAGAAAAAATGCATTTATTGACAATCTAAC
CCTTTCATCCAAACACCTCTTTGATTAGAGTTAGTTCAGGGTTAATCTAAAATTAAAATC
TAACTCTAACCTCTAACCGAGTTAAAGTATCAATACATGGCAATTGTCACTTTGTCATGG
CCCCTCTAGGTGAATACAGCGGCAGTGCTTTTGATAGATCCGGGATCAACAGTTTTTTTT
TTTGGCAAAATTGACAAATTTGACGAGAAGCCAAAGGATTTCACAAACTGAATTATGTTT
GAAATTTCACCCAGCTGATCCTTTTGTGTGGCGTCTTTGTCTTAGGCGCCACACTATACT
GTATGGTGTCTGACACTATGTTGTGTGACGCCTGAGACGTAGTGTGACGTCTAAGGCATA
GGCGGCACACTACACTGTGTGACGCCTAAGACAAAAGCGTCACACAATGTAGTGTGGCGG
CTGACTGTCGGGCGTCACACAAAAAAGTCAGTTAGGTGATTTTTTTTCAAACGTAGTTCA
GTTTGTGAAATCCTTTGGCTCCTCGATCAAATTTGTTAATTTTGCCCGGTTTTTTTAACA
AAATACATGCGCATTCCTATTCATATGTGCATGTTCGAGAAACATATCATCTTGAAATTT
ACAAAGTCATCTAGTTGTCGACGGAAACATCTCCTCTCACTGAATAAGCATTACCAAAAA
TCTAGAAATAAATGTGAGCATCATGATTTCAACACTAATGAAATGGGGATACCATACCTC
TAACCATCCAACTACAGATTGATCGCATACGGGGTCAACAATTGGCCGACAAAGTTTATC
ATGCTCGCCACATCAAATTTTTTTTAATTGTACACCAAAAATTCATGTGACTTTTTTTTA
AAGAATAGGATGCTGATAAGTCCCGAACATCAGATTTGTTAGTGGTAAATCGAAATTTTT
ATAACAATTTATATTTGTTGATCATTGCGAGTTCAGTTAGCACTAAAGAAAAATTAAGTT
TAGTTGGTTGCATGGCAAAAAGTAGACGGTGGAGAGGTGAACCCCGCAGACGCACTCCCG
GCGACTCGAGGGAATCCTTCCGGCGCCGCCATCACCGCACCCTTCCTCCTCCTCCTCACC
TCGCCGTCTCCTGAGGAGCCCACCGGCGAAGCCCGGGCCGGCTCCAGGGAAGGTCGCGGC
GGGGTATCTCGCGGGGAGGCTCGTGGGCGAATCTGGCGTGCAGGGGCAGGCGGGGACGGC
TTCGGCGCTGGCCGACGCGGATCCGGTGGCCCGTGAGGTGGATGACGCGACGGCAGACTC
GCGGTGTCCACGAGCGGCGGCAGCGACGAGGGAGATGCGCGGGCGCATGCTGAGGCGATG
GGCGTGCGTCGAGCGAGTGTGGAGGTGGCCTCGGCGCGTGTGCCCCTCTCTGCTCGGGCT
GGTCCGACGTGGGCAGATCCGAGGCCCCGTGCCCGGATCTGGCGGGGAGGCAGGTAGCGG
CTGGGGATTCTTCGTCGAGATCCGGTCGACGGGGGCGGCTTGGGGTCGGCGAGCGTCCCG
GGGTCGGCGGTGGTGCTGTGATGGTGCATGGAGGCTGGGGCAGTGGTCCCATGGGATGGT
TGTTGGCTTGACGGTGTTTGTCGTGGTGTGAGGTGCTACGGTTGATGCAGCAGCGGGCGA
AGGTGGGCGGTGACTGCGAGCGCGACTGGCGGTGTATCGGGTGTGGCACATCACGCGGGC
TTGTGGCTTCGATGGTGGCGGAGGCGGGAGTGCCGGAGCCTCAGGTGAAAGCCTAGCTCC
ACCTTGGTTGGAAGCGCCGTCTTGGGTGCACCGGCTCATCTCCTGCCTTCACCAGCAGTG
ATTCCTCCGAGCGAAAGTTTGAGTTCCCGGGTTCTGCCGAAACGGGAGACGATGACGTCC
TCGTTACTTCCTCCTTGGAGGCGTCGCCTTAGGAGGCCATGGCCTTACCAGACAAGCCCC
GGCCATGTGATGTTGCCATGTCGGCGTGCAGATGTCAAGGTCGAGCCATCAGCTCGAGTG
GTGCGTGACCTCGGGTTGACGTGGAAGTCGGAGCGGCGGCTCCGAATCTTGCTCTCTTGG
AAGGGTGTCGACACTGGTCGCTTGAGTGACAATATCGATGGCTAGCCTGTTGCGTGGCCC
TGGGGTCGGCGTGGATGTCGGAGCGGCGACTTTGGAGCGGTGGCTTGGGTGTTGTCTTCG
GTTGCTCGGGCGACGAAGCAAGCGGCTCATCTGGTGCGCGGCCTCGGGGTCGGCGTGTGT
GCAGCTTGTGTTTGAATGCCGGGGCGGCGGCTCCGGAGATGGTTTGTAGGGTGTCAACTT
CGGTTGCTTGGGTGACGGACCAGGCGGCTCGCCTGGGGCACGGCCTCGGGGTCGGCGTGT
GTATTGTTGGGTTTGTAGGTCGGAGTGGCGGCTTCGGAAATGGTAGTAGGGTGTTGACTC
TGGTTGCTCGGGTGACGGAGTAGGCGGCTCGCCTGGTGCACGGCCTCGGGGCCGGTGTGG
ATGTCGAAGCGGCGACTTCGGATAGGGTTGTAGGGTGTCCACTCCGGTTGCTCGGGTGAT
GGAGTCGGCGACTCGTCAGGGGCGCGGCCTCAGGGTCGGTGTGCGCATTACTTATGTATC
GGTTTTCGGCCAGTTTTCCTTAGTAACTAGTCAATTCTCTTCTTCTTAATGAAAATGCAG
AGCTCGAGTTGGTTTCTCAAAAAAAACTCCAACCTCCGTTTTCTCACTAGAAAATTATTG
TGCTTGACAACTAAATTTGATATATTCGCGTCAACTAAAGTTGCCATAAAAATTCAAGTT
GCTCATAGCAAATCCCGAACGTTCGTGATAATCATTTCTGAAAATATTAGAACTATAAGT
ATAGCGTGATAATCACTGCATTAGAGCAACTCTAGTCCTTTTCTTGTAATGCTTTAATTC
CATATGAAATGTGTCTTAGGGAATTATCCACCTATGCTTTCACTCGCACCTTTAGTGCCT
ACAAAAAATATATTTTCATCATTGAAAACATACCCGACCAAAATTTATTGACAAGAGCAA
CTCCCGTGGGAGGAGGCGGATGCGGAGGCGCAATACCGCGTCGCTCAAGCCGACGAGGCC
ACTAGTTCGGGCGCGGGGGTGATCGAGATCTTGTCGGACTAGGAGTAAATCGCTCGCTCT
AGCTCGTTTTCTAGACAAAAAAAAGACCCTGGAAGCTTCAGAGGGAGTCCTAATGCGGCA
CGAGAAGACGCCAAGGCAGTGAGAGCGCCCTGAGGGAGAGGGTGCGCCTTGCCCCCTTGT
GGCCCCATGTGGCTCCGATTGATTGACTCTCTGGCCTATAAATTCACATATATCCCAAAA
TCCTTAGATGAGCTTGAGAAACAATTTTTTTGCCACACAAGTCTCTTTTCTTTCACTGTC
CTATATGGAGGCCTTTATCGGTACTCTGTCGGAGGAGGAATCCATCACAGAGGCGTTCTT
GATCAACGTTGCTACCTCCCTAATGATGTGTGACTAATTCGACCAGGACCTACAGGTCCA
TAGCAGTAGGTAGATGACTCTCTCTAGTTTGATCTTCAATACAATGTTCTCTTTCGATAC
CTATTCGATGTAATCTTTATGGTGTGTTTGTTGGGGTATGATGAATTGTATGTTCAGATT
ATTCATTGAAAGTAATCGGTCTATTCTAAGATTTATTATGTGTGATTCCATATAGGTATG
TATGATTTGGCCAACTAGATTAGTAGATCTTTAGAGTGAGTGGTGCATAGTAGTAGGTTC
AATCTTGCGGTGTCCTCACTCTATGACAAGAGGAATAGTAAGTCACGTATTTGTATTGTT
GCTGCTAAGGATAAAATGATGGGGTTTGAACATATTAACAGGTCTTACTTTGTATATATT
ATGTCATCATGCTCCAAACATTACCCTTTTTGTTATGAACTTAATAACATAGATGCATGT
TGGATGGCGATCTATTGGTGCAGTAATAGAAGTAGATGCAGAACTATTTTGGTCTACTTG
TCATGGACGTAATGCCTATATATTGATAATGCCATGAATAACAACATAATTATTCAATTT
CTATCAATTTCTCAACGGTAATTTATGCAACCATCACTTACGGTCACGAGAGAGATGTCT
CTAGTAAACGCTATGGCCTACGGGTCCATTTATTCATTATATATTCCAAAAACATAAAGA
AAATACTTGATGAGTTATTATCTTTTTATTTATAATTATATATCATACACTATTTGAATT
AATTCTTGTAATTAACGAGTACAAGGGGATTGATATCCCTCTTGCGTGTGTTGGGTGCAA
GCATTTGTTTTCGTGTGGACGGATACTGTTGATTGTTTGTTTGCATGGTTTTCTATTGGT
TCAATAAACCTTGATTCTTACCCGAGATAAATACTTCTTGCTACTTTATTACATCACCCT
TCCTCTTCAGGAAAAATTCCTGTTCTATTACAAGTGGCATTAGTTCAACTGCAGATTTGT
CCTCGTAGCGGATGCACCTGTCGGTGTTGCGGTTTGGGGCCGGGCGGCCATGGGGAAGTA
GGGGTGGTCGATTATGTACCGGTCATAGGTGGGGAGGAAGAAGCGCTGTCTCACAGCCAA
AGGTAATCCCTCGAGTGGTTTCCGTGTGTCTTACTTTTAGTAGACGGATGATTTGTAGAT
TAAATCATGGGTTAATTTTTTAGATGGATGATTGGAGTTCTTCATCTTTCGTCGAAGTAG
GATAATTACGATATACTCCCTTTATTTTTAAATATAAGTCTTTTAAGCAATTTCATTAAG
GGACTACATACAAAGCAAAATNNNNNNNNNNNNNNNNNNNNNNNNGTCTACATACATCCG
TATGTAGTCCTCTAGTGGCATCTCTAAAAAGACTTATATTATGAAAAAGAGGGAGTACTA
CAATACTCCTTTCTTCCTTGTCCGGCACAGTAGTCACGCATTTCTTCTTCCACCAACCCC
CGGAAGAACCACCAATTATTCTTCTT