Map Locations of contig_140919 (4327 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_140919

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_8032 1 593 bp AK353861 Available Available None





CDS Structure of MLOC_8032






Contig Sequence (4327 bp)

>contig_140919 4327 assembly3_WGSMorex_rbca.fasta
GAGGCCGCCAACGCCAAGACCAAGGAGAAAGAAGTGGCTCTCGCAAGCATGATGACCGGG
GTGGAGATCATGAAGGTGGATCTCAGCACCGTGTCGCCAGGAAAGAGACCGTAATTCGAG
AAGATGCAGGCCAACATGCTCAAGTTCGACGAGGAGTGATCTATGGCCGCGAGCCTTTTT
TTGTATGCCGGCAGGTGTGCTGCCATGACCACGAGGCCGCGATGGAGCGGTGAAACTCAA
GTCCCACCTCTTTTTTGTGTGCTGGCATGTGCGCCGGCCGCTGATGAGTGCGTCAACATG
AATTGTGTGGTGATTGTATGCCGGCACCATGCCGGCGCTGACATGGTACCGACATGAGAC
ATGACCGCTGACATGATCTATGGCCGCATGCCTTTTTAAAAAATTATGGCGGACATAAAA
TGGATCGACACGTTGGACGTACTATCGATCCAAATCTAAAACAAAACGGACGCCGTGCGG
ACGTCCAACCCAAACGGACAAAAAACGAACAAAAGCGCGGTCCGTTTGGGTCGGCTGTCG
GAGTTGCTCTAACAATCTAGTTGCCGAAAAATGTGGGTCGCACTGTTAGTTATGTTGAAT
ACGAATGACCTTGTTTATTGCCGAGCCATCCTTCTCGGCGCATATAAGTTCTGCCTGCCC
GATTGCTACGGGTTGGTCGAATAATGGACCACCCATTGGATCAGTTTGTTTGTTTGTCCA
TGGAAGCGAATTCCCGCTTTGTTTTCTAGATGCCCTGAGATGCGCTAGCGGCGCGGTTGT
TGAAAACATGAAACGCAGCAAATAATTCGGGCTGAATGGGACTGGAGCCGTCCGGCTCAC
CCCATCCATTCCTCCCCAAAAAATTATACTACATGTCAGTGTCACCGGTGGATTGGTCGG
TTGTTTTCTTGCGCATGCTCGTCCATGGCCGCGGTGCACGCGCGCACTCGTCCACCGCGC
TTCAGGAGGGAGAAAGGAGCCCCATCCACCGTCCCGTGAACGGAAATCTGGGGAAGATGT
GGGGGGAGGCGATCATTGATGCATGGCATGGGGGGGCTTCACTTTCGGTTCCGTGCTGTT
GTGGCCGTCACCCGTCATGGACGGATGAAAAACGACTTGGACCGGAAGCCGATTTCGTAT
ACGAAACAACGGCATTTCCTCCGTGGATGGGCGTGGGCACGGACGGTTCTAGTGTCCGGC
AGGGTTTTCAGGAGGTCGCGGTTTGGTCGAACTCTCGTGCAGCTTCTGGAGATGATGGAC
CAGACTCCCTGTTGCCCGATCAGGACGGGGAAAGGGGCATCCGAACTGTGGTGACGCGGG
CATCGGAAACGCTGCTGCACCACAAGTTCTGTCCCGATTGCACCACAAACAGGATGGCTG
CTGTTCGAGATTAGAGTAGTAACTTGTTGGGGGCATCTCTAGCCCATCCCTACAAAGTAG
AGAAGTAAGCAGAGTAAAGGTTACTGAAATAATTTTACTCTAAAATTTGGTCGTTTCTAC
CAGATCTCAATTTTAGTGGAGTAAGAAAGGGATTTAGAGCAAACAAACACGAATTCAATT
CAAACAAACATACAAACCGGAATTCGGTTCGGTGCCGATTCATAATATTTACAATGTCAA
CCACGGAAACATAGTCTAAACTTACTGATTTTATGGCAGTTCTTTTGTTGTCTTCTAGAA
TAAGTTGGAATAAGCTACCTCTATCCAACTTATTTTAAAAACCCAATCAAATTTATTTTC
GTAGAAGTCTACTAATTAAGACTTGACTAGTAGACTTTAAAAATATATTTTTGATTAGGC
TTTTAGAATAAGCTGGATAGGGGACAGCTTATTCTAGAAGCTCAAAAAAGCAACCAAAAG
AACTGGCCCTTAGTCGTTGTCCGTATCTTCGATGACCTCTTTCCGCTCGGCTCACAACAA
CCCACCGATCATGGGATCTGAGCATGTGTCGTCGTATGGGTCGTCGAAGATATTGCCTCT
ATTGCCACCTCCGATCCCTTTGTTACCACCTTTGTTTTCGTTGTCGCTGGACATGACGAT
GACCTCCGCCCCTTGCTCCTAACTACCAGTACATGTAGCGCTCCGCCTCCACTTGCTTTT
TTTTTTGGGGGGGGGAGGGGGTTGCGGAAATACCGAGCCTAATATCTAGACCTCTCATCT
AAGTCTATCATCTAAATCCGAAGGCCCCAACCAAACCACATACCGGGTCTAGGGCACAAA
CTAGTATGACACACTTTCATAGGTCTTCGACGCTGTCTTCCATCGATCCATCTTCAGAGC
AAGTACTGATGCATGCACCTTACTAGGCATGTCATCGACACAGCCACGATGCCAAACAAC
ACCTCCACCCTGCGTTCGTCGATCGAGACACGCCTATCGTCGAGATCCAGCTGCGCCATG
CCGCCAATACTCGTCATCATCGACGCGGTAGATACAACGTCGCTCCTCCTGCCAATCACC
ACACATACGACGCCGCTGGAGCTACGCGGAATCGACCACCCACAACATCTCTCCCCTGAA
CGCCTGAGCCTCCCAACGGCACCTTCATGAAGTGTACGATGCTGCCGCCGCCCAATCTAG
ATGAAATTTTGGACTTTCGTCCGCGAGGGTTTGAAGGTGGATAGGAGCGACCTCGGCTTC
GCCTCCAGGGAGAGTAACAGTGTCGAGGGATGTCGCAAATGCAGGGCCGAACCAGCCGAC
CAAAATTTCCTCCGGTGCCCATCCTATATTACCAACCTCTGTTTGCTCCGGATCTGACAG
CAATCCGTGATCCAAAACCTGCAGAGATGAAAGTGCCATGGGACTCAACCCACCAGGAAG
GAGGACCGAAAGGAACAACTGTCATTGATCTATCCAAGTGCCGAATCGAACAACTCGGAT
GCGACGAGCACCATCAGCCCGCACCGGCCGACGGCGTCCAGCCGTCCAAGCGCTGGATCC
AAAGGGATCCAACCTGAACCCGACAGCGCCCGCGACCACCCGGTCTTTCCTACCACGCAA
CCACCGCCTCGCCACTAGCACACAACCAAGCCTCCGCCGCCGTGCCGCGCACGGCAGCGC
GCCAGGAGTTGTCCCCACACCGACGTCTCTTCACGATCTGACCGTCCCGTGCGAGCCGTG
ACGCTGGAAAGGGAGAGAAGCTCCGCCCCCGCCCTCCCAACATTTTAGTTACTTACCGGT
GCAGAACAACACTCTTTAATCAGGCATAGTTTAAAAAATCAAACATGTAATCGAACCAGC
GAGGCCGTCAGTTTAGATTTTTATCGATCGGACCGCTGGTTCACCGGTTCGATTTCTAGT
TTTTTATATCATAAATAATATATTTTATATACTAATGTCGTATTAAATAGACGTAAAATA
TAATATTTAACTCAAATTTAATAAGAAAGTTGGCTTTTCAAGATGGTTATTTGTCCGACG
TGCAACTTAAAGTTGGCTTTCCAAAATGGTTATATGTAGCATCATGGATTTGAATTCCCT
TAGACGTAGGTTATTTTTCTATTTTTATGTGTGGCACCTTTGGTTCATGCAAAAACCGAT
CGGTTTACATGATTTTTTATTCAATTATAGGTCGGTCTTTTTAGCTTAAAAATAAAAAAA
GGTGTCGGTTCCGGTTTTTTCCGCAGGTCGGCCTGGTTTTTTATTCGGAACTAAACTGGG
CCGCTAATTAAAATAAAAAGTAAGCTCCACCGTATTAAGCCCAGCCAGCAGTGAGCTATC
TGCTCTGGAGTGATGTAATGATGAGGGCTGTGGGCGGCAAAATTAATTACCTCTTATCTG
CTTCCACTAATAAACCCAGCCACTAAACGAACTGATTAATCCCAAAGCGAGCGCCCTACG
CCGGCCTTTCGCCGGGAGCCAGTAGCCGCCCTCGCTTGGCCGCCATAAATACCTCACATT
CCCCCGTCGCCTCACACCACCACAGAGAGCTAAGCGCATTCGCATCTTGAGCGCACACAC
ACCGACCCTAGCTTGCCGATCAGCCGAGGATGGCCAAGGACATCGAGGCGGCGCCCCCAG
GCGGCGAGTACGGGGCCAAGGACTACTCCGACCCGCCGCCGGCGCCGCTCTTCGACGCGG
AGGAGCTGACCAAGTGGTCCCTGTACCGCGCGGTGATCGCCGAGTTCGTGGCCACGCTGC
TCTTCCTCTACATCACCGTGGCCACCGTCATTGGGTACAAGCACCAGGCGGACCCCGCCG
GCCCCAATGCTGCCGACGCGGCGTGCAGCGGCGTCGGCATCCTCGGCATCGCCTGGGCGT
TCGGCGGCATGATCTTCGTCCTCGTCTACTGCACCGCCGGTGTCTCGGGTGGCCACATCA
ACCCGGC