Contig Data
morexGenes
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Map Locations of contig_140669 (3189 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_140669

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7956 1 306 bp MLOC_7956.1 Available Available LOC_Os06g11650.1, FRAME:+2, EVALUE:1e-20, 13106.m01264 protein phosphate-induced protein 1 conserved region domain containing protein, expressed
MLOC_7957 1 595 bp MLOC_7957.1 Available Available LOC_Os06g11650.1, FRAME:+2, EVALUE:5e-60, 13106.m01264 protein phosphate-induced protein 1 conserved region domain containing protein, expressed





CDS Structure of MLOC_7956






CDS Structure of MLOC_7957






Contig Sequence (3189 bp)

>contig_140669 3189 assembly3_WGSMorex_rbca.fasta
AGGTCGTTTTATGATTTTTTTTAGTCCCTCGCGTTAGGNNNNNNNAGGTTTTCGTGTTTT
GTACAACGCTGAGCCCAACCAAATTGACACAATTTTTTATGGGTTAGTTTTATACACAAT
TATGTTTATTCTCGTACCAGAATACCGGGTATGGTAAGCACCGCTACCCTAAGTTAAGTC
GAGGCACATCATTCATCAGTATAGCTCAGGCAGGGTCCGTAAATGCAGTTTGCTCAGCCA
CAAAATATTATGTTGTGACGCCTAAAGAAATCAAGTCACGATGAGCATTAAATTTTTTGT
TTATGAAATCATACTTTTTTATATCTACCACACATGCATATTCTAATAGTTTTTTTCCCG
TTGTAACGCACGGGCATATTTGCTAGTATATATCTATATGTATATCTATACCAATGTAAA
ATCATCCAAAGGAATAGATCTAATTAATCTCGGCTATCAAACCATGTAAATCCAATGACT
TAGATTGTTTCAAAAGCGAGTGATCAACGTGTTCAATATGCAATTAACATTTTATTAAAT
ATCAATGTATGTACTAATCACGTAATATCGACCTGCAATTAATTTCCTCTCTAACATTAC
CATGCATTGCGGGTACGTATTTACTGGTCAATATAAAAGACCTAATAAGCGGGTCCAATT
AATCTCGGACATAAAACCATTACAATCCAACGGTCTAGATTGCTTCAATGATGAGTGGTC
AACAATTTTAGCATGCAAATAGTATCATAGTACTAAATATCAACCTCTATGCTAATCATA
AAATTAACGCACAATTCATATCCTACCAAATATCAACATGCAGCTAAATTTGTTCCAAAT
ATTAACGTGCATTGCGTCGTAGTGTTAAGAAAAACGTGCATCACATGTACGCACTTTTTT
TACTCGTAACAACAAAACCACTTGTGCACCAATGGTATATCTCAATCCACCTTCGAAAGC
TCGTAAATCAACTAAACTAAGAATTCCAGGTCATGACACAACACGAGAAAATATCGTAGC
ATTGAACAGCTAGCCATGAAAATTGTTGCAGCCACGTTCGGACCCAAGTGGCAAAGACAT
TCTCCTCGTCCATGCCCCCGAACTACGAACTCAAACCCAAAACCGCGGAACCGGACGAAT
TCACGCGCCTGCCATGGGTTTCTTCAACTCCTTTGACGCGCCAATGCCCCATCACGTATT
CACGTCGTCGTCTTTACGCCCCATACGCTCCGGCCTGAAGCTATTTAAGCCCCCCGCAGA
CCCTGATAGATCGACAAACTCATCAAGCACACACAAGTCAGCAAGCACATCACAAGTCAC
AGACCCACAGAAAGAACCAGCTCGATCGCTGATCCTGCATGCCATGGGCGACCGCAAGAT
GGCGCCGTTGCTGCCACTGCTCTGCCTCCTCTCCCTCCTCGTCGCCGCCGCGCCGGGGTG
CGCCGCGTACAGCCCGCGGATGCTGTTCCTGGTGAAGCCCGACCCGATCGTGCTCCGGGA
CCACGGCGGCGCGCTGCTCACGGGGAACCTCACGGTCAAGGTCAACGTCCTCTACTACGG
CCGCTTCGCGCCGGCGCAGCGCGCCATCGTGGCCGACTTCGTGCGCTCGGTCTCGGCGCC
GGCCCCGCGCGGCGCCGCCGAGCCGTCCGTGGCGTCCTGGTGGCGCACCGTCTCGCTGTA
CCGCGGCGGGGGCGCGCGGCTGAGGCTCGGCCGAGAGATCCTCGACGAGCGCATGTCGCT
CGGCCGGTCCCTCTCGCTGGAGAACGTCACGGCGCTGGCGAAGGGCGCGGGGCACCACCG
CGGCGCCATCACCGCCGTGCTCACGGCGCCCGACGTCCTCGTGGCGCCCTTCTGCATGTT
CCGGTGCGGCGTCCACGACCACGCCACGGCCGGCGCGCACGGCAGGGCGAGGTACGCGTA
CCTGTGGGCGGGCAACCCGGGCCAGCAGTGCCCCGGCCAGTGCGCGTGGCCGTTCCACCG
GCCGTCGTACGGGCCCCAGGTCCCGCCGCTCGTGCCGCCCAGCGGCGACGTGGGGATGGA
CGGCACGGTGATCAGCCTCGCCGCGCTGCTCGCCGGCACGGTGACCAACCCCTACGGTGA
CGGGTATTACCAGGGCAATGACGCCGACGGTGCGGGGCTGGAGGCCGCCACGGCGTGCGC
CGGCATCTTCGGGAGCGGCGCCTACCCCGGCTACCCGGGGAGGCTGCTCGTGGACCGGGC
AACCGGCGCGAGCTACAACGCCGTCGGGCTGAGCGGGAGGAAGTTCCTGCTCCCGGCGCT
GTGGGACCCGACAACGTCGCAGTGCAGGACGCTGGTGTAGACGCCGTGGGAGCAGGCAAA
ATGGATGGTCTCGTACTCCAGCTGCATGAGATCCGGAGGAGAAATAAATGCCTTCATTTA
TTTTTCAGTCCGTTTGGGGAGTAGTAGTACTGTAGCTCACTTTGTTGCATTTACTTGTTT
GATCCGTACTCGTTGCAATTTGTTTTCTGAGCAGCAAAGATTGTATTGTGCTCCGTATGA
GTTGGCAATTTGGCATTCATCGCAGTATGCCAGTATTAATGAATTTACATGTTCTTCTTC
CCTAGGGTGCTTCTGGACTCTGGAGACACTGAATTAAGAATGTTAGTACCTGCCTCCTGC
TCCGTAAAAATAGAGGATTTGCGGAGCACCCGTTCCCCGCTCCGTGTATTTTAACATCAG
CTCCGCCAGCTCCAGGAGCTGAGTTGCGGAGCGGAGTAAAGCCGAACAGGGCCTTAGTGT
CGTCTTTGGAAGAGAGTCGATTAAAAATCCGAACCGCAGAAGTTCCATTATTAACAAACA
ATCAAAAAAAAGACGATCTCGAGCAAAATAAAATAAGGAAAAGGAGGATTAATATCACTT
TGAACCAAGGAAATAGCGTTCGTTTGCCATCCCTTTCCAGCTGACGTTTGTCACATAACA
TTTCTAACTTTTCAACAAAGTCATCCTCCCTCTTGTATTGCCATGAATTTTCTTGGTTAA
TATCAGATATCTCTCCTAATAATAAAGCGCGCAGCGCTTCTGACGTCCGTCGTCGATTAT
TTTACAGAAAAGCCCTCGCAGTTTCAGGTAATTAACCCGCAGTCCAATTTTAAGTCAGAA
CGAACCTTTTTTGTCATTTTGCAGAAAAATCCTCACAATTTTAGATAATCAACCCGCGGT
CCATCTTTT