morexGenes - Barley RNA-seq Database

Contig contig_140643

Source Contig contig_140643

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_140643 (2237 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_140643

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_7950	2	1712 bp	AK375386	Available	Available	None

CDS Structure of MLOC_7950

Contig Sequence (2237 bp)

>contig_140643 2237 assembly3_WGSMorex_rbca.fasta
GAGGTAGCCCGAGTAGACGGAGAGGAGGAAGGCGGCGCTGGTGACGTACTGCATGTTGTT
CCACTGGCGCACGTAGAGCATCCCGCCGGGGCTGCGCTCGACGTTGTCCTCGGCGGCGGC
GTTCTTGCCCATGCACGCGCACAGGTAGTGCTCCGCCTTGGCGCGGTACCCCTGGAGCGT
GGCCCGGTGGCGCTCCTCGTGCTCGCCACGCAGCAGCAGCCGGGTGGCGAGGATCTGGAC
GCCGGCGTACTTGACGTCCCAGCTGAACTCGGTGATGGCCCATCCCGTGCCGCCGAACTC
GTGCGCGTTGTCCACCACGTAGTCCAGGTAGCTCGCCCGCCCCGTGGCGCGGTGCAGCCA
GAGCGCCGCCCAGAGCAGCTCGTCGTGGTAGCCGCTCACGGACGCGTAGTAGCTCTTCAC
CTCCGCGATGCTGCTGTCGTACTTGCCTCTGTACTTGTCAGCGAACTCGAACAGCTGTAC
CACCAACAGAAAAACAGACATATGTCAGCACAATGCTCACTTAAGTACGTACATACACGC
CATTAAAAAAGCAAACCAACCAACTAATATTCCCCCGATAATCCAACGGCGGCAATAATA
ATCGCCCATCATCGCATCGCATCGCATCGCATCGTTGTAATCGCGTGGGTTTCTGCAGGC
CCTAACGTGAACGGAAATGTGGTTGTTACGTTAAGTAGCCTGTCGCATCACGCAGCCACG
TAGTAGTACGCTGACAGTGTGCTGCATGATGCCGCTAGCTCTTTCGTGGACCCACCTGTC
GGCCTCCCCGGACCGACAGAACCTTCACGCGGTTATTTTATATAATTTGTCAATTTGTGG
AGAAGACGATTTTGCGAGCGGCATGACGATGACGTCATGTGGACAAGTTGGCACGTGCCG
TCGCGAGCAGCGACGAGAAGAACACGGTTCCAATGTGAACCAGGGAGAAAAATCCTCTGC
CCTCTTTGACTCGTGCCTCCTGGCTGGTCCTCAGAATCTACAGCCCAGCAGCTCCGCTAC
ACGTACCCGACACATTCCACACAAGCCAAAGAATTTACCACTCGTAGTAGTACTAATCTC
TGGAATAGTGTACTAAATTAGCTACGTGCACTGTAATAGTAGTAGTAGTAGTGAAGGTGA
CAATTACAAACCTGCTGGGCGTGGTGGAGGAGGAGGTGGGCGTAGTGCGGGTTGGTCTCG
CGGAAAGCCATGGAGGCGGCGGCCAGGGCGGCGGCGGTCTCGCCGGCGACGTCGGAGCCG
GGGCGCTCGCGGTCGACCTTGTAGGCCTGGCGGGACGTGGTCATGTCCTCCGGCCGCTGC
CAGCAGTAGTGGTCGGTGTCGCCGTCGCCAACCTGCAAAGCAAAGCACCATCAGTCAATC
ATTTCGTTCACATTTCGTCAAAGCCGTGGAAGCAGACGGACAGATACACAGACATGCATA
TGCGTCGTGATTTGTTAATAAGTTCCTGGCTAATCCATGTGGAGGCTAAGAGACAATCAT
GCATGCAGTGGCAGGTGCAGGTGCAGGCGCAGGTGTGAGATTTGCGCATCCCTCGACTGA
ACCGCGCCTTGGCTTTGCTTGTCCTCTAGCCCCCACCTAACAAATGTTCCTCTCCCCCAG
CTTTCAAAAAATTCAAGTTAAAATCTATACTACAAGTTTTTTAGCTTTTGTTTTTGTTTT
TGTTTTTGTTTTCTCAACTCAATTTGCCAGCCCACGGCCAATGGTGCGTGCATGCATGTT
TGTACTACAAGTTTTTTAGCTTTTGTTTATGTTTGTTTGAAGTTGTTGATTGGATGATTA
GCCAGCGAATGGCGGTGATTACGATGGGGGTAAGGGTAACTGGGAATTGTAAAAACAAAA
ATTACCTCGGCCCAGAGCTCGTCGGGCTTGGTGTGCGCCTTGATGAAGTAGTCGGTGCCC
CACTTGATGGACTCGAGGGCGTGCGCGAGCTCGCCGGCGGCCGCCACGTCGCCGCCGTAC
TCAAGCAAGCTCCACGACAGCATGGTCACCGTGAAGGCCATGGGCAGCCCGAACTTGACG
TGGTCGCCGGCATCGTAGTATCCGCCCACCAAATCCACCTAATGGAACCAAACACAAACA
CAGCAAGCAAGATCCATCCAAATTAAGTCAGCACCCTGATCCTGATCGACCGAACGATAC
GATGATCGGCCGGCCGGCAAGGAAGAAGAAGGGACGGAAGAATTCGACGACGGGGACGTA
CCCCTTGCTCGAGGCCG