Contig Data
morexGenes
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Map Locations of contig_140563 (4439 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_140563

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7923 1 212 bp MLOC_7923.1 Available Available None
MLOC_7924 1 266 bp AK367190 Available Available None





CDS Structure of MLOC_7923






CDS Structure of MLOC_7924






Contig Sequence (4439 bp)

>contig_140563 4439 assembly3_WGSMorex_rbca.fasta
TTCTTCTTCCCCTTCTTGTCGCCGCCTTCCTTGGACGCCGGCACCTTCTTCTCCGCCTTG
GGCTTCTTGCCCGCGGGGGTCTTCTCCACCGGCTTCTTCTCGGCAGCCTTGGGCGCCATG
GATGCTGCTGTTGCTGAGTGCTGACTCGAGGGTGCGGGGAGGTTGGGTTTGAATCGAAGG
TCAGGGGAGATGCAGATGCTGCGGTGTGGAGAGACGACGGGAGCGGCGAGATTTATATAC
GGTAAACTGGAAGGAGGAAGGAGGTGGGCAGCGGTTGGTGGAGAGGCTGGTGCCTCGGAT
CGATGGCGTGGAGTGACTCCAGCCGTTTGATGATTCCTGGGATGGACGGACTAGCTGCGC
TTGGGCGCGGATCGGTGACGTGGCGAGAACGTCGCTAGCGGCGCGGGATAGATGGCCTGT
GGACAACCACGCACTCGGTCGAACGTTACTCCGGCTATATTGTGTTCTGGGATGTACGTA
CGTACGAGGCGAGGTAGATGCCATATACTCTGGAGTACCACATTATGTTAAAAGAAAAAA
TCACGTTGCATAGCATGAAGGAGATGCTCAAAAGATAAAAACATAAATAGAGAAGCTCAA
AAAAATGCATATATAAAGTTCACACACCACAGTTCTTTTAAAAAATAACACGGTAAAATC
AAAGACTTGCAAGTTAAAGTTCGACTTGCAACTAGGATAAAATAAACTACATGCCGGTGG
CATGTCAAGGATGAACCTATAGCTGAGATGGAAAATAAAACACAGACAAATATCAGGAAT
CAAAGATTGGTCAGTGAGAAGATGGGGATAAGCCTCGCCGTTGATCCGGCAAACAATGAC
ATATATCGGGTCATATGAAAAGAAACTTAAGAACATGACGACACAAAACAAATGGAACAA
GTGAACACGCGACAAAAGAAAAGACGAAGTGATACAGACATGCATAATTTAGTTTATACG
AACATTAAAGCAAACAAAATAGGCTTCTATAGACTTAGATGAGCTAAAAACTCGGCTAGG
ATTTAGCAGATCTGAAACAAAACATCTAGCTACACGATAAAAAAAAAGAGGGAATAGAAA
ATAACCAACACACAAACATAATACTTGCCCACTAAAAAATGTCATATTGGGCGTCACTGG
TTCACGCGGAACAAACAAAAAACAGGACACAATGACAACGAGCACGGTTCAAAAGCATGT
GTTTCCAACAATATGTGAGTTAGATGAAACATTTTTAACTCTCATTTAAATAAGAATTAC
CAAACCAATCTGAAAGGAGACCCAAACTGCGCCATGAAAACGGTCCAACACAAGACGTGT
GCGTGACCAGGTCGATAAGTAGACACCAACCAAACGACGCGACACATAACGTGCATGACA
AAAATAACCCATGATCACCATTTACACGCCATTAAAAACGAATATATGTCAGAGTGAAAA
CAAATTCATGAATATCAAACAATTAAATAAAGGGGCAAAAAGAAAATACAAATAAAAACA
AAAAATCACGAATTTTAAGTAGTTCATAATTGGAAACAAATAATAACAAAGAAAAAAACA
AAACAAAACAAACACGAAAACAAAACAAAAAACAATTACTGGGAGTCAAATAAAAGTGTA
CAAAAATGAAAAGACCTAGAATTGAGTCGGCACAAAAAAGAAGTAGCAAAATGCTGTCGA
CGACGGATCAAACAATGGCCCTCTAGATATGAGGCTCTCCCGAGGAATGTGAGTGGACTA
TAAACAGTAAACGGATCCCGTCTTTTCTATTTATAGAGATTGAAATTGATGGTGAATTTA
CATGTGAGTCTAACATCTTTTTAAAATAAACAAATACATGCATGCACACATATAAAATTG
CGAACCTTTCAAGAGACATATAAACAAACGTATTTTACTTATACGTGGGATCTATCATGA
ATAAACAAATACAATACTTTCATGACAGACCATATTTCTGTAAAGGACAAAAATAACAAA
CACAAAAGTGTGACTTCAACTCAAAATCGATATTGGTTTTAGTTTCTCTTTCCAGCATAC
TATGGTCATTTGAAATTCTTTGATGCATCATGCCTCTCATCGTATTTTTACCATCCTTTA
GAGCATCTCTAACACACCCCGTATAACACCGACCCGTAAAACGTGTTTACAGTTTGTGGA
AAAACGATTTTGCGGGTCGATGCGGGCGTGAGCAGAGTCACACCCCGTAAAATGAACCCG
TAAAAAATAATATTCTCTGGAGATACCAAATTTAGCTCATTTTTTTCTTCTGGTCGTCCT
CTTCCTTACGTCAATCTAAAATTGGCACATACTATAGGACAGGGCGCCCACCGGCGAACG
AGCAAACAAGGAAGACACGGGGCGGGTCGTCGGCTGACGAGCGGCTAGGGCGGGGCACGC
GGCGGCCGGACTCCCCTCCGAGCTAGAGCAAGCTAGCTTATGTTGTGGTTGGGGCTTTGC
AACACGAGCTTTGTGTCGCTTGGCTGAACCGTTTTCTACTGTTTGTGCAAAAGAATGTTG
CTATTGGAACGTGGTTTATGTTGCGATCCAATCCTTTGCAACATGATCTATGTTGCGACT
ACAACATGCTTCATGTTGCAAGCCAAGAGTGAACATCCACACACGTGTCGAACGCCCGTA
ATTGGCTGCTTCGATGATGTTGCGACAACATGCTTCAATGACGGTAACGGGTGCTTCGGT
AACCCTTACGGCGGCATGCTTCAAACGATCACGATGATGTTGCGAAGACGTGCTTTGACG
ACCGCGACAATGTTGTGACACAGGCTCGTCTGCTTCGCCGATGCTGCGAAAGTGTCCTTC
CCGACCATGGCAATGTTGCGATGATGGCACGACTGCTTCAACGATGCTACACCAACGGTC
TGGCTGGTTCGCTGCTACTGTGATGGCATGCTTCAACGGTCGTGGCGACGGAGAAGACGT
TAAGAGCATATGTCCGCCCGTGGTTAATTTTTTTTTCTCTTTCCTGTTCGGTCACTGATC
GGGTGCGTCTACACACATATGAGGGGTGGTTTGAGACGTCCGGTTGCAGATGATCAAGGC
TACTCAAAGCATGCATCGCTAGTGTTTTGCATGTAGTGGTGATGCCCAACTCACTAGGGA
AAATCAATGGTCACTACCAACTTGCACTAGGCTTGGTGAGAATGGTTAATGCATGCAGTA
TGCATAACGGTCGTCGGAAAGGGAAAAAAATGTATTATTATTATTATTTGCGAAATGGTA
CGGTCGTGCATCTCGAAAAGGAAAAGAATATGCTTTATGCACGCTTTTTTTACATGAGAG
GCATGGTTTTGCTTCCGTGGGAGGCACGGTTTTGCCTTCGTGAGAGGCACGACCGTGCCT
CTCGAAAATGGGAAAAAACGTGTTTTACTTTCTTTTTTCGTGAGAGGCACGCTTTTGTTT
CTGCGGAAGGCACGATTTTGTTATCGCCTCTCGGTAATGAAAAAATACGCGTTTTCTGCT
CTCTCTCTCTCTCTCTTCCGCGAGAGGCACGGTTTTACTTTCACGAGAAGCATAATTTTG
CCTTCGTGAGCTCTCGAAATGGTAAAAACTCATTTTCCAATTTTTTTCTATCACGTGAGG
CACGGTTTTTTGTTTTTTTTTTCATAAAATAAAGTTCGTCAAAAACCTATCAACATGTAT
TTTGTTTTGAAAATCTCGACGTGAGAATCCAACGGTGAAAATGTTTTAAGATTTGAACGC
ATAGTTTACAAGATAAAATATTTTGAAAATATGGATTTACGAAAAAGGGAAAACTCTCAG
GTTACAACAAGTGGCGGACATGTAGTGCACCATTTGTCGCAATCTGAAAAGGTGGAAGTA
ATCGTTTAAAGGTATACTCGTCAACTAGTGATTTCGGAAGCACACCAGCCAGGCAATCAC
GTTTTGCACAAATATTAAAGACAAATAATCAAATGATTTTTAAACTTAGGTTTGAGATAG
CTATTTCACATCCGGATGTGAAATAGCAAATCTACACTATTTTACTCAGATTCTTTCATG
TTGTGTTTTCAACAAGTTGCTACCTGTTTTTGTTTGTGAAATCGTATTTTTCTTACTGAA
GAACGTCAAACGTTTGCCCTATTTTGACCCCAAAAAAATCTACTGGATCCTTCAAAGGCC
TGACCACTCCTGTTTCTCGGTAAGTATCATTTGTCTTGTGTCATTTGCCTTAATTCCCTA
TGTTTGTCTAAAAGAATTTTGAAGCAACCTGCATATTACCATTAAACTGACAGTGCCACT
CAAGCATTCTGAATCAGAAGCCGATAACAGACATTCAGAAGCAGCCATGGATACAAGAGA
ATATGATTGGAAGGATTAGCATCTTTACTCATTCCCGGCAGAATTCAGAGATAAATTACA
GCCCTTACTGGCTTGTTCATCGAACTAATGAAACAGCCACTACAGACTATGCAATTACA