morexGenes - Barley RNA-seq Database

Contig contig_140202

Source Contig contig_140202

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_140202 (1761 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_140202

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_7806	1	690 bp	AK375969	Available	Available	None

CDS Structure of MLOC_7806

Contig Sequence (1761 bp)

>contig_140202 1761 assembly3_WGSMorex_rbca.fasta
TGATCATCTATTGATCAACGAGGTAGTCAACTAGANNNNNNNNNNNNNNNNNNTGTGATC
TATATACTCACACATGTATTACGACTTCCAGTTAATACAATTATAGCATGAGTAATATAC
AATTATCATGAACTGAAAAAATATAATAATAAACATTTTATTATTTTCTCTAGGGCATAT
TTTCAACAAGTCGTCGGCCTGCTTCGTCTCGTGTGGCCTTAGGGCCATGGAGACACGATG
GATCCCGATCCTTGCCAGTAGGAGGGCTCCATTTTTAGTTTTTGTTTTGTTTTGATAGTG
TTTGTGTCCTAAGACAAAGACGGCTACCACGATGAAAGAAGGTTCTTTCCGCCCAGCCCT
TGTTCTAGTGGTACTTCTAGCACAGTTGGAAGGAGTGTGAAGGTTTGTCTCCAACTAATC
TCGCGAGATTTGGTCGATGTTTGTCTTTGGTGAATCCGTCTGGATCTCGTCTTTGTTAGT
TTATGTTTTATGTGTATACGGATTGGATCTGGGGCTTGTTGTCGTGGATAGTGTGGTAGA
TGAGTGTGCCAAAGAGGATCAACACGAGCTGGTACTCCTCCAAGAGTGTCTGCACGTGCG
CGGTCGCAGCTGCATCCCTGGCTTCCACAGCTTGCTTCGCCTCAAACCACACTCGCTCGG
TCGACCAGAGGCGTTGGATGACTAGATCGAAGAGGTCGTCGAGGCGACGAAAGTTCGCCC
AAGCCCGCGCTCCGACGCTGCGGGACTTCGAGCCACGGGTCCGACACGGGAGGGCGGAGG
GAGGAGCTGTCGTCTTCGTCTTCTACGCGACGCTTGCGGCCGCCGAATGCACCTCGTTCG
CCCCACCCCCGTGACACCTAAACCAACCGCGACGTCCGAAACTCCCGCCGCATCCATGCC
CGGAACCCGCAGACACCATCTCCGACAAGATCCAACGAGGAAATGGGCTGTAAAACATGG
TCGGAGGAGAAATGATTTCACGCAGAAACGATGAAGGCGGACGAGGGATATATGGGACCG
AACCCTAAAACACGTCGACATCCGCATATATGGAGAAAACGAGGGCGGTTTACCGGCCTT
CCGAATTTGTTTTATGAGCCGGGATGTTTTTAGCGGATTTGATCGGGCCCGTTTTTTATG
CCATCTCATAAACCGTTCCCTGTAACGCAGCAGTTCGCTCTAATTCCCCATTCCCTGCAA
ACCCCTGAACCCTTTCTCTCAATCTCTCCTCGCCATCTCAGGATGCTCCGCCGCGCCGCC
CCCTCCGCCGCCACGGCTCTCCTGCGCCGTGCCCTCTCCACCACACCACGGACACGCTCT
CCCGCCGCGGCCACCGCAGTCGCGTCCTCCTCGGCCGTGAACTCCATCCTCCTCCGCTCC
CTCAAGGAGCACTACCTCGAGGTCTGCAAAATGACGCCCCCGCCCAAGATCAGCCCGCCC
AAGCCCTACACCATCGTCAAGGGCGCCCTGGACCAGTCTTCGGGCCCCGTGCTCCGCCGC
AGTTTCGGCGAGGCCGGAGAGGAGATCTCCATCTCTGTCGCCAGGCTCGCCAACATCATG
CCCCCCGGCGCCGATTCTGACTCCGACGACTCCGACGGCGCAGGCGGGGCGAGCGAGTCA
ATCAGCCAGCTCTTCCTCCACGTCGACATCTCCAGGCCAGAGAGCGGCAAGTCGCTGCAG
TTCCTCTGTGGATTGTACCCCGACGCCGTGGGGATCCATTCCGTCTGCCTTCGGTCGAAG
ACAGCGGCGTCTGGGGCGGTG