Contig Data
morexGenes
Links



Map Locations of contig_140099 (4270 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_140099

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7775 1 604 bp AK360358 Available Available None





CDS Structure of MLOC_7775






Contig Sequence (4270 bp)

>contig_140099 4270 assembly3_WGSMorex_rbca.fasta
CGTTCCCAAATATAAGTCTTTAAAGAAGTTTCATTAGTGGACTATATACGGATNNATATA
GACATACTATAGAGTGTAGATTCATTCATTTTNNNNNNNNNNNNNNNNNNNNNNNNAATA
TCTTAAAAGACTTATATTTCGAAACGGAGGGAGTATTAAGGAACATAGTTTCATGTCATC
GTTTTCAAGGATAAACCAGCTTATGTCCACTAAGGTTGCGTTTGGATTCAGTGTATTGTA
ATACGGAGGTGTCAGATTTACACCCGTATTATACTGGTCAACACTGATTTCTAGTGAAAA
ATGAAACCGACGGACGGAGGCCTGTAATTTTTACAGGTGTATTCTACAAAAATACGCTAT
TCCAAACAGGAAGGCGAGACAATTACTCTTCCTTTTTCATAACGTATATTTATGAGAATA
TTTTTTATTACTGAATGAACTTCGCTTATAACAGGAAGATATACTACGGTGGGGGGAGGG
GAGCCTGGCCGGCGAGGACAAGCACGGACTCGAAGGGCAGTGCCGGAGCTACAAAGAGAG
AGTTGGGCGGGCTCGAGAGCACATTTTTAAAAGTACGTTGCTTGCATGTCTACAGGCAGA
TTCAGAGAAGGAGTTGGCTGCTACTCCTGCAGTCGTGTGCCGGTGGCTAGGCTAAAACAG
TGCCTTCTAAACAGTTCTGGGCTTGGCTAGGTGTAATTTTATTTGCTCCAACGTTGGGCG
GGCCACAGCCTAATCGGTCTTGTTGTTACTCCGCCGGTGTGGCAAGGTAAAGGATGACCC
AACAGGTTTAGGAATGGGTTGGATTCTGCAGTAGCCATATAAGATGTGAGCCGAAGCAAA
TTGGTCTGTCTCTCTAACCAAAACAAAGGCATGAACGAAATTATTTTATTCGGTTCTTTT
TAATCCAAACAAACGCATGAGGGCGAGCCAAGAGCACAAGCGTGGATGAGCAAAGTGTGA
TCTTTGCCCCCTCTGCAAAAGCAAAGGCGGGCCCGATTTTTCTTATATAGTAGGGGCACT
TCTTATACCAAATATGAATTTTTGAATCAATTTTCAGTGAAATACAAGCAGACTTTGCTA
AAGTTTTAAAAAATTGAGTGGGGGCCTCACAAGCGTCGATTTCTTTTTACTCCAAACAAA
CGCACGAGGGCAAGCCAAGAGCACAAGCATGGATGAGCAAAGTGCTGGCTGGACAAGAGA
GACGTCAAGACTTGGAACAACATGGGAGGCTACAACACTGCAAATCGAAAGGTCATGGCT
TCTTTCATCGTGCTTGTCAACGAACAATTTTGAACAAATGAAATGCTTGTTTCGTTCGGA
AAAAGCCCACATCGCCGCATTTCATTTTAAAGGCCAACGAGGAGGCTAAGATTTGGACGG
CGCGAGGGCTAGGCATTTGAGAAATATCATGCTGGGAGCGTGAGTCTTTTGTATTTCCAA
ACATTGCCATGCTCGTCTTTTTTGAGGAAGCTCTGTAACCTCTCTTCTTAATAATGAATG
AGGTAAATCTTTTGACTCCATTTAAAAAAAAAACATGAATAGAACAACCCATTTGGTAGA
TGGCGTTCCATTTCAGCTGGTTTCTCAATTAAACATGTCACTAAAGACGGAGGGCACCAT
GTGGAGGATAGACATGAAACGCCGGTCAATGGCAGGGGTCAACAAGATGTTATATTGTAC
AACAAAGAATATATTTTGGATTCAATAAGGGCGGTCGGTTAATTTCCTATGGCATGACTG
CACCAGGCTCATCTGAGAATTTGACCAAAAATTGCCCACCAGCGTGGCTTCTAAATATAG
TCAATATATGTGTAAATGGAGGCCATTACACTTCAAAACCCTGGGACAAACAATGAGCTC
AGATCATTTGTTCGACTCAATGAATTCCCGGTATTCCTTCTTCATCTTCACACCAGAGAA
AGTCCTGCATTTCCAAGATTAAGATATATCAGTAGGCAAGACGGGAGTTCTGCAGCTGCC
CAAGAGAAGTTCGACATATTTGGGAGAAATTCCGGGTGCATGGAAGAATCTTTGTTAACC
CAGAACAACTCATATGTCACGATTAAGAGGTACTTGCAAAGAGAGCATACTTATCCTGCC
AATTCATATGTCACTATTTTCGTCGAAATGGAATTCATGAAAGAAGATGCACATAAGTGT
TGACCACTGATCTATCTCTATGAATACATACAACATGCTGATTATTCATGTGTTTTGGCC
TCATTTACAGGATGGTGACATCTCAACTTAAGCCTGTGGTTGGATGCAAAAATTGTTAAC
TGTGGGATATGTAATTCCAGTAGAACCCGACCATTGAAAAACGAAATGATCAGAGTGGTC
ACTGCTTAATTTGGCTTATGACTACCAAAGGGATAAGTACAAAAGTAGAATTATGTAAAA
GTACAAAAATAGTTGCTGTCATAGAGCAAGAAGGTTTATTAAGAACAATAAAATACTCAT
ATATCAGCTAACCCAATGTATAGGTCAGCTGTATTTTAGGTTGTGGCCGTAGTTGAATAG
AAAAACTAGCAAGATCAATCTAAGTAGCAAACCTGATCATTTCTTTGTTTTTAAAGAACT
GAACACAAGGTGTTCCCATGATGCCTGCAGCTTCTGCTATTTCAGGGTCCTCTTCAATGT
CAATTTCAACAAAATGAACGTATTCGTCATACTCATCTATAACCTGTAAGAAATATCATT
CATAATGATGAGGTGTCAGTATTAGCAAGCAACAAAACAAACAACAAAAATAAAATATAA
TTGCTTGAGAACTTTCTTTTCAAGCTGTAAGGGCATGTTTGGTTGCCCACATCTACCCAT
GCAAAGTCTGGGGAACAAATTTGAGCCGTTTGGTAGCCTGGGCCGTTTGGAGAAACAGGC
CCGCATGAAACTCAAAGCGGTGCTCAGCCCTATTAGCTTATTGCTAGGAGAGGGAATTGG
AGCAACCAAATGAACTGCACAACCTGGCCAAGACCTCGTATTCCACATAGGCTCGACCTG
GCCAGATTCCCAGGAAGCTCAGAACTTGTGCTAACAACCAAACATGCCCTAATATGATGA
GAACTTAAGTACTACTCCCTCCGTTCCTANNNNNNNNTCTTTTTAGAGATTTCACTAGGG
GGCTACATACGGAGCAAAATGAGTGAATCTAAACTCTAAAGTATCTCTATATACATCCGT
ATGTAGTCCCCTAGTGAAACCTCTAAAAAGACTTGTATTTAGGAACGGAGGGAGTACCAC
ATATCAGCAAGGGTGTTGCAGTTGCACTGCTGCACCCAATGGTAGTGGAGCAACTATCGG
ATTTAACTCTTACTCCCTCTGTAAACTAATATAAGATCATTTAGATCACTACTTTAGTTT
ACAGAGGGAGTACAAGCCTACCACTGATCATGCGTGTATCACCAAGCATAGAGAAGGGTG
CCATCATGAATAAGGGATTCTCATGAAATTAAAAGTAGACAGGGTGATCAAATCACATCC
ATGCATTATCGCATTGCTGGCATAGATCAGTCCATAGAGAAGGGTTCAGACCACCTAATG
CATTTCAAATGGTAACATCTGTACCCAGTGTCTTAGACATATACCTAGGGCCCTAACAAA
AATATACCATTGCTTAGCGGTGTGTGTTGAAAACAAGATAAGATTTGGAAATTAACCGAT
GCAAGTGTGGAGAATCAATTTTAATAGAGTGGGTGATATTTATGGCTGGAACGCATACCG
GCACCTTCACCTGATGCAGTTCTTATCGACTTCCAACTTTATAAATGCCACCATACAATG
CAGACAGCATGAGCATATGCCAATTCAATTCATTTGAAGCGTTTCAATCCTATATTGTTC
TTTGTTGGATTGAGTTTATCTTCAATAAGGATTTTATTTCTACAACAAACAAATGAGCTT
TGGCATGCTCTAGCAGATCCAAATCTAAACTATCAGGCTACTGGCTTGGCTTGTCACTAT
GGGTGCTCAGTGGTCAAAGGAAACCAGCATAAAGTAAATTTATTTGTAAAATTAAGGTAG
ATGTGAAGAAGATGTTAAGATACATTTTGCTTAGCTAGATTTAAGGTGGCTGACAAGTAA
ATTTAATTTAAGTAGATATTAAGATGTTCAAAGTTCATTTACAAAAATTTAAGAACTAAC
CTTGTTCAAAATTGGTTTTAATGTTCTGGAGGGACCACATGTTGGAGAAGTATATAGAAC
CAAAATGAGCCTTGGGCTTCCATGGTATAACTTGCGGAGTGCATACTGCAAAGATAGCAA
AGCTCAGGAT