Contig Data
morexGenes
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Map Locations of contig_140043 (4330 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_140043

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7761 2 1104 bp AK251450.1 Available Available None
MLOC_7762 2 1904 bp AK250483.1 Available Available None





CDS Structure of MLOC_7761






CDS Structure of MLOC_7762






Contig Sequence (4330 bp)

>contig_140043 4330 assembly3_WGSMorex_rbca.fasta
CAGGGGCGGACGGCGCGGAGGCAGGTTGTGCGCCGTCCGAGCCCAAGGTAACACTTCCTT
CTCCCAACCAAACCCCCCAAATCCAAATCCAAATCCAAACCCTCTGAATCTGAAAAAAAA
AATCGCTTCTTGCCGCGTTTTGCAGCGGCCGGAGACGGGGGAGCGGCGGATTCGTCGGAG
CAAAAGTCCGTGGAGATAATGCGCAAGTTCTCGGAGCAGTACGCCCGCCGCTCCAGCACC
TTCTTCTGCTCCGACAAGTCCGTCACCGCCGTCGTCATCAAGGTCACCGCCCTCCCCCTT
CCCCTCATCCTTTCCCTGCTGCTGGTCATTACCTGGACCCTCGACTCCATCTTCTTCGTC
CACCAGCCGCTGCAAATGCCAGCTAATTAAGGTCAAACAGTGTGGTTCATGATGGTGTAC
TTCATTCACATACCTCCTCCTGCTGCTGCTGCTGTACTGATGTGATGTGCCTCCTTGTTG
ATTGATTGATCGATTGATTCAAATTAAGCTCTAACAGCGTCCATGTTCACGCCCATGATG
TGTCTGCCCCTCTCCTTTGATGATTAGTTCATTGATTTTGTTAACTAGAAGAAGAAAACC
TCTTTTTTTGCAGGGGCTTGCTGACCACAAGGATCAACTCGGAGCTCCTCTCTGCCCCTG
CAGGTAGTATTCAATCATCTCATGCCTTGTTAGGAACGCATCGTCTGTTTTTGTTTCCGA
CACACAGACATGTGCCGTTACTTACTTACTTACATGCCCGCCTGAACGTGCTGCTTTTGG
AATCGAATCAAACCAGGCATTACGACGACAAGGCCGCCGAGGCGGCCCAAGGCTTCTGGA
ACTGCCCGTGCGTCCCCATGCGAGAAAGGTGAGGCAAAACTTCCCTGCCTTCTGCTATCA
CTTGTTACGGTAGCGTGTAGAAAAAGGATGGGAAGGGATGGGATGCTCTTTTTTCTCGTC
GTGTTTAAATGCCAGAGATGTACCAGGTGGTTCAGTTTCAACCCCTCTTGGCTTCTTATC
ATTGTCCGACATATGTTCCTTTCTGTTGCGTATACATTTCGCATTAACTTTGATTTGCCA
CCGGAGAACAAGTTAGCCGGACGCGTATCTCCTGTGACGTTAGCACATATTATTGACTAC
CCCCTCCGATCTGTCAACATACATCCATTTGAGCGATAAATAATATGGATCGGAGGGAGT
ATTACTTATGTATGATAAAGAACCGTGGCACGCAAGTCGTGCTAGCTTTCAACTGAAAAG
GGATTTATTACAGTGAAAGCTCGGTTAGAATCATCTGTTCTTTACCCACTCACTTGTGCA
TAGCAGTAAACAAACTACCGTGGAATGTAAGTGGTATCAAGCGAAAGCTCGGTTTGGATA
ATTTGGTTCCTCACCCACTGATGTTATTATAGTAAACAGCCATCAAACATTATTTAGACT
GTGCTGGTATGTGACCTGGAGGAAAGTATAATAATAATAATAATCTCTGTTTCTTCAACT
CTGTGATCTACTTGAATCTCGGCTATAATAATAATCTCTGTTTCTTCAACTCTGTGATCT
ACTTGAATCTCGGCTATAATGATCTCTGTTTCTTCAACTCTGTCATCTACTTGTGCAGGA
AGGAGTGCCATTGCATGCTTTTCCTTACGCCCGACAACGATTTTGCCGGAGAGGACCAGG
CATGTCCATCTCCTTTTCATATTGCCGATGCCGCAACTTCAGATACTGCCTAGCTCTATA
TTATCTCATTCTTACACGTGGACGCATACCTTTTTGCAGGCCATCAGCTTGGAGGAGATC
AAGGAGGCGACGTCCAAGTACTAACCAGAAAACGCCTGTTTTTGCTCGAGAGGGGGATAT
AGTCGGTCGGTCGGTCGTCGTTGTCGGACCTGTATATGTAGTATCTCTGTAACAGCAGCA
GGAAAATAAAAATTTGTGTCTGGAATGATGTCTGTTGTCATCCGTCTCGAGAGAAATTAA
GGCCTGATGGTTGCATTCCCCGGCTTGTCAATGTTACCAAATTTATTGCGTGTTTTTGGG
CTCGCGTAAAGCCTACTCCATTGTGATAGGAAGGAAGCAAGGAAGGAAGGATGTTGTGTG
AAACGTCGTCGTCCTGATGCTTCATTTTTCTTCCTGAGTGAATGAATGGTGTGTGGAAGG
GAAGCAACAGCAACGTGCCATTGCCCGTGTCCATGGCACCCAACAACCTTTTATATCTGT
TCATTGTCATTATTATGTCTTTTGTTATGCATCTGTGTGTTGCTTTTGCAACCACAGTGT
TATATACTCCCTCCGCCCTGAATTACTTGTCGTCTAGATCTATTTTAGTTTTAGATTCAT
CCATTTTCATACAATTCCGCGACAAGTAATTCCGGACAGAGGGAGTATATGCGATTTGCT
CCATGTGCCCTCGTGCGCTCCATTTATCTGATCAACATCTATTACAGTACCATTTAGTGT
ACAATTGTTGCATTTTATTGTTGTGGACCTCAGTTTTCCATTTCTTGGCCTCGATGTGCC
GTCTTGGATGAAACGAACCAAAAAACCGAGTTCATTTCATTTTACAGAAGAAACGGAGGA
ACCCTAGATAGGTAGCCAGGTGATCACCAGTGTGTGATGGTGAGTGAGGAGGGATGAGTT
GTTGCAGTTAGGCTGCTGTATAGATAGATAGATAGGTAGTAGAAGTCCATGACTCGCCAT
CACCCACCAATCAATCTCACTCCCTTCCTCCCATCACTGACTTAAGTGTGTGTGTGTGTG
TGGGCTTCTTCATCTTTTTTTTCTCCCTTTCCCACGGCTCCATCCATTACTATTCGTCAC
TGTCCTGGTTTTATTGCTCTAGCAGTACATAAACATTGCAAATAATTTGTTGATTTGCTC
TCCTTCTGTGGCCTCTTGTTAATCATCCACCCATCCATCCATCGCTGGGGTGCTTGTTTG
CCATGGCTCCTCAGCAGGTGAAGCTCGTCTCCACCATCTTCCATTCAAGAATATGGATGG
CTTGCGTGCCTTGAAGATGACGCTTCTTTGTTTGTTTGGTTGTCTTGCAGGAGGGCAGCA
AGATGGAGGAAGAGGAAGACGAGGAGGAGCACCGTCGTCATCGTCATGGCGAGCGGCCGC
TGCTCTCGGCGTGCGCGCAGGAGGAGCAGGAGGAAGCCAGCAAGCCGTTGCCATTGCCGG
CGAAGAGGAGGAGGAGGAGGAGCCTGAGCAGGTCGTCAAGATCAGGCGAGCAGGAGGACG
GCGCCACCCGCTCCCTCTCCTTCTCCAGGCTCTTCAGCAGCTTCAGGATGATCGCCGCCG
CCGCCGTGGACATTGATCAGGATCAGCTAGCTGCTGCTGAAGACGGACGTGCAGCCCTCA
ACCCTCACCACCATCATCATCACCAGCCGCCGTATCCCAAGCCGGTGTGCCGGACGCAGT
CGCTGCCGATGACCAGCATCTCCAGGAGGCTCCCTGCACCCCACGGCCACCACCGGAAGC
GGGTGGCCGACTCGAGCTCCCTGCGCCGGTTCCGGGTCTCGTCGTCCTTGTCGTCGGCGC
CGCCCGTGCCATTGCCCGAGTCAGAATCGTCACCACCCTCTTCGCCATTACCATCACCAT
CAGAAGAGGAAGAAGGAGAGGAGGTGGGGGAGGAGGAGGCGGTGTGCCGGATCTGCATGG
TGGCGCTGTGCGAGGAGGAGGACGAGGAAGAAGAAGGAGGAGGCGACGGCGACGGCGTGG
TGCTGAAGCTCGAGTGCCGGTGCAAGGGCGAGCTGGCGCTGGCGCACCGGCGCTGCGCGC
TCCGGTGGTTCGGCATCAAGGGCAACGCCAACTGCGACGTCTGCGGCCACGACGTCCTCA
ACCTCCCCGTCACCCTCCGCCGCCTCCCCGTCCCTCCCCCACCACCACCTCCCACCGCCG
GCAACAATGGCGGCGCCAACCAAGAAGGAGAAGGAGGAGGAGAAAGGAGGGGGCTGAGAG
GTGTGTGGAGGCACGGGACGGTGATCCTGGTGGTGGTGAGCATGCTGGCATACTTCTGCT
TCCTGGAGCAGCTGCTGGTGGGCGACCACGGCAGCAACGCCGCGGCGGCCCTCGCCGTCT
CCGTGCCCTTCGCCGTCGTCCTCGGCACCTTCTCGGCGCTCACCACCGCCGGGATGGTCT
CCTCCAGGAGATACGTGTGGGCATACTCGGCGCTGCAGTTCCTGTTGGTCGTCCTCTTCA
CCCACCTCTTCTACCGCTACGTCAAGCTCCAGGCCGTCATCGCCATCATCCTCTCCACCT
TCGCAGGCTTCGGCGTCGCCATCTGCACCAACGCCGTCCTCCTCCAGGCCATCCGCTGGA
AGGCCGCCGC