morexGenes - Barley RNA-seq Database

Contig contig_140020

Source Contig contig_140020

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_140020 (2651 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_140020

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_7749	1	728 bp	AK369100	Available	Available	None

CDS Structure of MLOC_7749

Contig Sequence (2651 bp)

>contig_140020 2651 assembly3_WGSMorex_rbca.fasta
AATTTTAGAGGCAATTTCGACGACGGACGGGCAAAAGCATTCTTCCTTTATTAGTAGATA
GGCATAGATATAAAGATATAGGTATAGATGTAGATATGTATTAGGTATAAGAGAGAGATA
ATGATTTTGAACTTTGGACTGTACGGTTTAAACATCCTGGTGACAATGAGTCCGCTATGT
CCTGGCACAAACATCTCTGCACGGCTTGCTGTGTCTCCGTAATTTTGCCTACGGGCACTT
TTGGGTGATTAATAATCTAGAAATTTACAGAACGGTCTTAGTATGCTGTACAATAAGATC
GCTACAATCACACATGCCGAACGAAAAATGTTCGTTCCATAAACTGGAGAATGCGGCGTT
GCTCTTCACATCTCAATCTGGTGAGGATGACTGTGAATGTCTCCCTGGTTCTCCAGGGGC
ATGTACTGCGCCATGATGGCGCGGATCTCTGAATCCATGTACCTCTGCGTGAAGAGAAGC
AAACAGAATTAGATGATATACTGACCTATATTTGATTCTATGAGTTTCTAATGAACACGT
AAGAGGTTGTTTTCATATCGTTTACCCGGATCCGATACTTGTACACTGCGTATCCTGCGA
TTCCTGTTGCTGCCAGGCCGAAGAAGATGACCCAGAGGAAGTTCCAGCCTACCTGTGCTG
CAGCACTCTCGCCTGAATAAGATGACGAATGTCAATTCAGTGTAGTGTTGCTCACGTCCA
ATGCTAAGACTTCAATCCTATACGTTGCTATATCTGTGTACAATGGTGCCATCTTAGGAG
TGCCCTATAAGATAAATGCTGAGGTGGCAGAGAAAAAACCCAGAAAAGAAGTCTTGCCTT
CTCTTAATTAAGAGATGATCTCTTAGCAAGGATATCTGTCCCCGCATATTTAGGTGCATC
TAGTTACTAGAGATAAGACTAAGACATCATCATGTTTTATTGCTATCTCTAGATTACGTG
GCAGGTTTAAGATAAGACTGTCTTATCAAACCACCTCAAATTGATTAAGGCTTTGTTCTT
GTGCTTTCCTTATTTCTGATGCTCATTTTAAAGCTGGTGTGGCAAGTCCAGTGCTCTGGC
AAACTGGAATGAAGTTTGACATATTTTCTCATCAATAGCATCACATTTCCTCACACCTAG
AACAAAATAGTGTATCAGTTTGCAACTTGATGAAGAAGATAGGAAACTAGCTTGAAATCC
AGGTATCTAAAAACTGACTGAACCAATTTGTTTAGCCCAAAAGTATGCAATTAATTTTTT
AGTAAGAAAATTTCATTTCATTTTTTGTGGACTCTGTACCAAGTGGATGCATAGATGCCA
TAACTATGCAATTACTGAAACAATAACAAATTAGTCGTCGAAGATATGTACATACTTATG
CATGTGTCATGCTCCTTCATGTACAGCAAGCCTCCACTGCAGCCGCACTCATAACTTCCC
CATGTGTTCTTGCAGTTACATTCCTTGCACTGGCATGCAGTCCTCTCCTTGCATTCATCA
ATATCTGTCACAAAAAAGTCACATCAGCAGTTCAGTACCACATCTAAGGAGCAATGTGGC
CAGCAATATACAATATGCTATGGCTGTGAAGCCAACCCTAAAGTATATATTCACATTTCT
TTTAAACCTGCAAGTTTTGTAGTGTAAAGACTTCCAGCGGCCTAACAACGTTCAGTAATT
GACTTACCTTCACATTTGTGGATTCCATCGCCTTTGAACCCATCCGGGCACTTACAGCCA
TCAGCCTGTACTTAGTTAAGCACCAAGAATATGCTTTTAAATCACATTAACACACTAAGA
AGCAGTATGGAAAAATTCCTACTGATAACTTACAGTACAAGCAGAGTATGTCCGGCCATT
CATGGTTTCTTTCCAACAGCCTCCATTATTAATCTCACACCGCCCAGCTCCGGAAGCTAG
AATAACAACAGCATAAGTTACTAATTAAGAGGTTATATGGGGTTCCGATGCCTAATTTAG
AAGCCAGCACCATAGGACGTTATACGACAATTGGCAGGTGATACATGCAGCTTGATCAGA
TGGATTAGCTGGCTGCATCTTGTCAGAAGGTTGATGGACATTAACCTCTCTGATAGACCC
GATCGTGTTCATTGGAAGTTGACCACGAATGGAGTCTTTATGGTCAAATCTATGTACATG
CATCTCATAGATTCAACGCCTATTCCAAAATCAGCGCATATATGGAAGATCAAAGTTCCG
CTTAGAATTAAGATCTTCATATGGTTTGTTCACAAAGGGGTTATTTTAACGAAGGATAAT
CTAGCCAAGCGAAATTGGAGTGGCAATCCTAGATGCAGCTTCTGTCCGAATAAAGAAACT
ATTAAGCACCTCTTTCTAGATTGTCCTATGGCTAAACTGTTATGGCGCTCGCTTCAAATT
GCTTTCAACATCAGTCCCCCTAATAGTATAAACACGCTATTTGGGATGTGGTTACAGGGG
TTGATATTCATATTGCTAAACTTATTCGTGTGGGATCATGTGCACTATTTTGGGTTGTAT
GAAATTGCAGAAATGACTTAGTGTTTAACAGACAACACGATATTCACTTCTTGCAGGTTA
TCCTCAGGGCTACCTCACTGATCCGCACGTGGTCATTACTCACTCCTGTGGAAGCCAGGG
AGCCTATGGTT