| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_139877
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_7694 |
2 |
2047 bp |
MLOC_7694.1 |
Available |
Available |
LOC_Os05g49930.1, FRAME:-3, EVALUE:1e-127, 13105.m05350 protein GRAS family transcription factor domain containing protein, expressed |
CDS Structure of MLOC_7694
Contig Sequence (5056 bp)
>contig_139877 5056 assembly3_WGSMorex_rbca.fasta
GCTTGCCAAAGAGAAGATAAAGGAAGTAGAGGAAAATACTTTGATTCTTGCACAAAAGTA
AATACATAAAGATAAAATTAAATACATAAAGATAAAAGATAGGCCCTTCGCAGAAGGAAA
GAGAGGTTGTCATGCGCTTTTTGGTTGCATGCAAAATCCCTTAGTGCAAAGAAACGTTAC
ATTATATTGCTCCTTATGACAACAACATTTATTATGCGTTATATCGCTTTCATTATAACT
ATCCCAAGTTCATACAACTCTTAATTTTCCTTACACTAAATGATCGAACACGTTTAGAAG
CAACTTTTATTGCCTTTTACACCGATGACAACTTACTTAAAGGACCTTACTCAATCTATA
GGTAGTTATGATGGACTCTTGAAACATGGGTTTGGGTTTAAGGTTTTGGNNNNNNNNNNN
NNATCTCTACTTAGTGCGGAGTTTTGTCTCACAAAGATAATTGACAAACACCACATGTTA
GAGGATCTATAACAATATAANNTCTATGTAAATGTGAACAAGCATAAATCAATACGTTGT
CTTCTTTGTAATTAAAAAGAACTCACGATCATAAAAGATGTCACGAATGTTGTATTTGCA
TGTAAATCTTCTTTTTCGTTATTAATTCTTTGCAAATGGGGGTCAGAATCGTGGTAAAAG
TAGTCAAAAGGGCGAGAACAATGAATTCGGTCCGATAGAGGGCGTCGAGCGCATGCAGAT
GGATGGACGGGAGGATGGCGGTGGCGGTGCATGCCAGCGTGTTGGAGCTTATTATGGGGT
CGGCTTGGCTGCATGCTGCGGAGAACAGAAGCCGCAAAAGTACCGGCACTGCCAGCCCCT
GCGCGTTGCAAATAGGCTAGGCGTGGCGTTGCGTTCAGGGGCCGGCCGGTGCTTGCCGTG
CCGCTCAAGTGCAGATGCCACCACACGCTCGCACTTGGGTGCCACTGCCATGGCCCATGG
ATGGCGACTTGCGTTTGCGTACGAACGACGGGGTCTTGCTCTGGCCGGGAAGCTAATCAA
GCTGGAAGAAAGCGTATGCATATGCAGGTTTCTGCCCACATAGCCGCACGCGTATGGTAT
GGATGTCTCCTGCAATGGTCTTGCGGATGGATATACATACATATATCGATCTTGCTCACC
CCAACAAGGAAAGGTGCCATGGCATCTTCACAATCCACATGCATGTATCTTCAAGATGAA
CTACTAGTACTAGTAGCAACAATGACTTGCAACTGATACAACAACTGTTTGACACATAAA
TTAACAACCAGGAAGGAAGGAATGACGACACTATCTATTCTCTCAGGCTGACTGACTGAC
AAGTTTGAGAGCGACACTTTATTGAACCAAGACGAACTAGACCGATATCCATCTGAGACT
GAGAGTGGATATCATATGACACGCTGACTGATGACTGACGACCGACTCGACTCACACGAC
TGCAGCATAAGCTCCGACTAACCAACTGACACTCCAACTCTAACAATTATTCAAACCGCC
CCGTCGCTCTAGCTCTTTCATCACTGCGCCCCGGCGGCGCCCGGCAGACGGCCGCCGCTG
CTCTCGCCGATGCCCATCTTCAGCTTGTGCTTGTCACCGTGCTGCTCGGACTCGGAGGTG
CCGGCGCCGTCGGCGGCGGGCATTGCGCTCCACACGGACGCCGTGAACAGGGGGCGCCCG
TGCCACGCGAGCGAGAGGCAGCCGCCGATCTCCTGGACGCGGAACCCGTCGCCGGAGTAG
ACGCGGACGAGCTTGGCCGCCTGATTGGCCGCGGTGGGGCCCAGCGGCACGTGGGCGAGG
CCCGTGCGCCAGAGCCGGGCGCACCAGTATGCGAGCGGCTCGTGGCGCTCCGTGCGGGCG
CTGCCCTCGCAGCACACGATGTTGAAGATCTCCCTCTGCAGGTACGCGTCGGCGCCGGAC
CCGTTGCCGATGGCGCCGCCGCGGCTGAAGGACATGGACGCCTCCATGGAGTCGAGCACG
GAGCCGTAGTAGAACATGGCGTTGCTGAAACGCGGCGCCAGCCTCGACTTGTTGTGGTCC
GCCTCCTGCTCCACCACCGTGAACACCCTGGGACGCATGGCGGCGATCCAGCCGAGCACG
ACGTCGATGGGCGAGGGCAGGGACGTGGACGCGGCGTCCGGGTCCACCAGGAGGCGGTGG
AGCTGGCAGATGGAGTTCACGGCCACCGCCTCTCCGGGGAGGACCTGGAACATCCACGGC
TGGAGCGTGTCCAGGCTGTCGTCGGGGACCCTTTGGAAGGAGAAGGGCACGTTCACGGCG
CGGGCGAGCTCGGCGAGGCGGAGGCCGACTTCGTCGGCGGCAGGCGCGGAGCCGACGCCG
GTGATGCGGACGGACGGAGGGCCGCCGGGGCGGATGGAGAGGGCCTGGATGAGGGCGGGC
CACTGCACGCCCTGCATGATGGCGAGATCCACGACGTGGACGCGGTCGCAGCCATCAAAC
GCCTCGAGGATGGCCTGGTTGGCCGTGAAGTGCGCGAACTTGAGGTAGGGCGCCGCGTCG
TAGAACTGGCGGTAGAGCTCGCCGGCGCGCTCCGGCGAGGCGTCCAACGCGAAGCAGGAG
TGCGGGGACGCCGGGAAGAGGCGCTGGGTCAGCGCGGCGGCGAAGTGGCTGGCGATGCGG
CCGATCCCGGTGCCCGTGGAGACACTAGTCGCGAGCATCATGCGCGCATCGGCGAGCTTC
GCGGCCGCGGCCGCGTAGTCGCCCGCCTGGACGTCTTCGGAGCAATTGACGAGGCGCCAG
ATGAGATAGACCGCAGCCTTCTCCGCCTCCTGCTCCCTCCTCGCCGCGGCCTCCGCAACA
GCCGGCGGGACCGTGGCCAGTGCAGCGGGCGCGTACGTGGCCGGGTGGACGCAGTACGCC
GCGTCGGCGCCGTTCGTCGCGGCGGCCGCGGCGGACAGGGAGGCGGCGGGGGCGGGTTCC
ATGCCCTGCCAGCCGAAGGCGAAGTGGCCCATGTGTTCCTCGAGGGCGAGCTGCGTGAAG
GCTGCGAGTGCTACTGCTGGCTGTGGGTGAGCGTCCGGTCCACGCTTTGGGGTCGTATTT
GTAGGTGTGGAGAGCGCCGATTGGGTGCACACGTGGAGGTGGCGATGGCGCCGTAGCGAA
GCGTTTCGATGGCGTCCGGGAAACCGTGGATGCGCGGGCGGGGGTGGGGGAACCAAATCG
GATGGTTCACAGTACACCGGGGGCATACATCCGGGTCGGGCCGGGCCGGGCCGGGCTGGG
CTTACGCAAAGCCCAATATGGTCATGGCGTGCTTGGGCTTGAGAAAACAATTTCGTTTCA
AAACAAATAATTGAAAAGCATACAAGTACATTTGTTTTTAGAATAGATATGTGTATTCTT
GAACCTATTTGTAAAAACACATGGAGATGAACATGGTTTTAACCTTTTCACCCTTTCGGC
CAAGGCCTCGGGCCGAAAACTAGGGCTCGGGCCCGGGCCCGACATGGCACCGATGACGTA
AGTGCATACGTTTTAGGTCTTTAGGATTGGTTTCAATTAATTTATGAAATTAATCCCCAC
GGTAACCGTCGATGCCAGTAAGAAAACAGTTATTGCCGATTTTGGAATTGTTTTAATAAT
TTACTAAAAATATTTGATCCCTACGATCGATTCCTAAATTACGTATAAATTTAATGATTT
AGTAAAACTCCGTATCGAAACGCTCGATTTTAAAAATATTTTATTAAATTACTCAATTAA
ACTCTACCTCACTATCAATTTTGGAATTTATTAATTTAATTAGATAATTGAGATTAATGA
CTATCGCAACGGTCGACTCCCAAATTGTTAGGTGGTAATCTCATCCGACCATCAAACCCT
TTCTTTGGTGGTAAAATCAAACTTAGGAAACCTTGTTCTTGTGTCACTTGTTAGGATCGA
TTGTTTATGGGTTAGAGATGGGGGTGAATAGTACTATCAAACAAAACTACATCAAATTTA
AGGGGTTGAAATTTTTTAAGGTACAAAAGACTAGGTTGGCCCTTCGGGGCACTTTAACAA
GTGAGTAACAAATGGTTGAAACTTTAATTCTCTAGCATTGCCCTTGCTCTCCGCCTCGCT
TCCCAAGCGCTCCCCTCGTTTTTCTTCTCTCGACCCTCCCCTCTCCCTCCAACCGTCGCC
GGCGGTGAGTAAGGTGAGGGACCCTCTGCTTATATGTCTATTGTTCTAGTTCTTAGATTT
AGTGTCCTTAATAGCAATTTGTGGGCTACCTCGTCGGAGAGGACTCTCCTAACTGCATTG
ATCGATGTCGTCATCGAGACCGCGAGTGTCATCTTCCCAGGCGGTGGTTCCTCTTTGGTG
TGGCTCGATTCTCCCCTCTCAATAACCTCTAACATAGGTCTTGTTCATGTTGATTCCAAT
CCTTTTTCTTCTAATTTGGGGCATGGTTCACTTGATCGTGGTTGGTACGTCTCCAACGTA
TCTATAACCATTTTATAGTTCCATGCTATAATATTATCATTCTAGGATACCTTTTCGGCA
TTTATTTGCTGATTCATATTATTTTAGCACTAAAGTATTAACCTAGTGCCAAGTGTCGGT
TGTTGTTTTCTGCGTGTTTTTGGTTTTTCAGGTTTAGAGTACCAAATGGAGTCCACGTAC
CACGAAACTTTTTGGTGATTTTTNNNNACCAAAAGAAGACCTCGAAGCTTCGAGAGAAGG
TCGGAGGCCACAAGAGGGCCCCACAAGCCAACAGGGGGCACTGAGGGGGTGGTCGCGCCT
TGTTAGCTTATGGGACACCCCCTCGTCTCTCAACCTCGTTCTGAGGATAATAAATCCTCC
TATATTGCAAAAATCCTAGGGGACCTTCTGAAACTCTTTTTCCGCCGTCGTAAGTCTCTG
TTCCATTGTGCGCCTATCTGGAGCCCTATTCTGGTGACCTGTCGAAAGGGGGCGATCATC
TAGAGTCTCTACATCAACCATGTTGCTCCCATGGTGATGCGTGAGTAGTCTACCACAAAC
CTACGGATCCATAGCTAGTATCTAGATGGATCTCTCTCTCTAGCGACCTCTATCTCGTAA
TAACTCCGTATAGCAT
