Contig Data
morexGenes
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Map Locations of contig_139775 (5424 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_139775

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7657 1 1413 bp MLOC_7657.1 Available Available LOC_Os06g35770.1, FRAME:+3, EVALUE:1e-50, 13106.m03693 protein expressed protein





CDS Structure of MLOC_7657






Contig Sequence (5424 bp)

>contig_139775 5424 assembly3_WGSMorex_rbca.fasta
GGGACTAAACTTTCCACCACCTTGTCATGCCTCAACCTACATGAGCCCTTAGAGATTTTT
CTAAAATTCTCTAATGGGCCTAAAGCCCACTACCAATTTCAACAGGGGTCACCAAAGATG
AAGACTATTGGCTGCAAGGCTAGGACGATGGTGGCTTGGATCGAAGACGATACTAGTTGC
TTTTGGTGCGATGGGTGTTTGGATAGAAGAATAGAAAGTATCTCAAGCGGGACTGATTAA
TTTGCCACGGTCCATAGACATGAACCGTATCAAAAAGAATACACAACTTTTTTTCTTTTA
ACTGAAAATACAATATGATTTTCTTCTCTTTGCTCCTTTTTAGTGGAACTTCTCTTTACT
CCTCAGTTACCCTTTATTTTAGACATCTACCTACATGGCATTCATTAAGGTACAATTGAG
ATGAGGTAGAGCACTTGAACAACCCTTAGAGCATCTACAACCTGATTTGGCAAATTTGTC
CCTTCAAACGCCCGTGGACGCGTCCCGACAACCCTCATATATCATGCCAGACATCGATAT
ATCTCAAATACACCCTCTCAAATCCATAAAAATGCATGCATGTCCATCATTCACGCCAAT
GTCGCACCTGAATAGCAATGTTGCTACCAAAAATACATAGTTCTTACATAAAATTTATTT
TAAGTGCGCAACTCAAACATTAGCTCATTAGTTTCCATTGTGGATCCACATATTCTTCAC
AAGATAACTAAGTAGTTGCGCGTGCACATGATGATCTCGGAGATTTTGCTGCATTTGCAG
AGAGTACATGAGCTAACTTGCAACTTGATTTTTTAGGATTTGAACTTGTTCTCGTGACGC
TTCAGAATCAATGGTTTGGGCAACATCGTTAGCCTCATCCTCGATCATCACATTGTGCAA
AACAACAAAACATGTCGTCAGCTGCCACAAAGTTTCTGATTCCCAAATCATTGCAGCTCC
ATAAACAATTCGCCAACAAGATTGAAGCACTTTGAACGCCCTATCCACATCCTTCCTAGT
TGCTTCATGCATTCGATGCAAAGTGGCTTTGTTTATTGCCGTGTGGTTCAGATATGATCT
TCACAAAATGCTGCCCACTCAGGATAGATGACATCGGCAAGATAGTATCCCATGTTGTAG
TCACGACCATTGACAGTGTAGTTGCATGGTGGCGATTCCCCATTACAAAGCTTCCTGAAC
TCGGGAGATAGTTGAAGCATGTTGATGTCGTTATGAGAACCCAACATTCCAAAGAAAGCA
TGCCAAATCCACAAGTCATGTGATGCCACAACTTCCAATATAGTGGTGGCCTCTTTGGTG
TGACCTTGATACATTCCCCGCAAACCTTTGAGGTAATTCTTCCATTGCTAATGCATAAAA
TCAATTGACCCAAGCACTTCTGCAAACCCTCTCGTCTCTCCAATGACCAATAACTTTTTC
ATGTGGTGCACATTTGGTTCTCTCAAATACTATATTTCAAATACCTGCACAACGGCACAT
GCAAACTTAACAATAGTCTTTAGGCATGTGCTCTCTCCCAAACGGACCATCTCACCAACG
GAATTTATGGCGATACCAAGTGCAAGCATCCTCAGAGATGTCATACATTTCTGCTTAGCA
CAGAAAGAAAGTTGGTCGCGACAATCCCTTGTGAGCTTGAAGTAGGATTGTGTGCCTTCA
CTCCCTCTACAATGCTCAAAAAATGGTTTCCTCATGCGAAAACGACGATGAAGCCATGGA
TAATCCAAAAAAGTTAGGTCAGGAGCAAAGCAGTCCATCTGAAGTAGGGCTCTGGAGACC
CTATCCCGATCGATCACTCTTCTCCCTTTGATTGAACCCTCGAAGTTTAGAATATTCTCC
ACCCGCCAGTCCATTTCCTCTTTACATGCTCATGAGCATGAGCATGTCCACTTCTTCATG
TGAATCCGATGAATCAAAGAACTCAACTTCAATCATTTTACCAATCCCCGTCAGTCAATA
CTCCTCGTCGGACGCAGCATCAAAATTCATGGCTTTCCCTACAAATAAGTCACAAAAATC
TGGGCCGGACATTTTGTTGAAGACATAGAGGGCAAGGGGCAGCTCGGGAGTTGTCGGATG
TACCGCGGTGATTTTTGGACCGACGATGATGTCCGCGGCAGCGAGCATGAGAGAGAGGAC
TATTGTGTCGGTCTTGGCGGCACTGAGGCTCGGAACGGCCGAAGAGCAAGGATGGCGGCG
GAGCTGCGAGGCGTCCGACATGATGGGGGGAGAAGAAAGGAGAGAGCAAATGGATGTGAT
AGGTTGAGAGGGTGAATCGAATGCAATTTGTTGTAGGATATGTCTCTCGGGTCTGACATG
ACGGACACGTCCAAACATACTTATATATGTCCTGTATTTTAATTGAATATGGGGGATGCC
GGTGAGCGAAAACGTCCGGGTCTTGTTTGAGTCGTTTATCTGATATATTTTTTGACGGTC
AGCCCAAGCGTGTGAGCAGCCTTAATGTTCTTATAATTCGGCCCGAAAGCTAAGTCTGAA
TGTGTGATACATGCGTCAAATTCTTGACAGGTGTGGGGTACCAATAAGAACCCTTGTTAT
TTTTACACATGCATCCCAAAATCACGCAGTACTCGGGAAAACCATATATGCAGGTGATGC
ATGTTCCGATGGATCGGCTAAATTATGTGTTTTAACTCTTTTGCTCAAGTAAATCTAAAT
CGGATTTTCGTTTAAAAAAATCGGAATTTGATTATTTTCTATCGTCAGACACATGACGAT
GAGATATAACAACCTACCGCTAAGGTCCCTGACGATAGGGTTGCATTTTTACCGTTAAAA
TTTCTAAATCTCAGACATAGTGCGCACATATCCTACCATCAGACACCTTGACGGTAGGGT
CTACCTATTTACTTCACTAAACGAGGGTCAAATCTCGATTTACTTCACAAAAAGATCAAA
ACATGAATTTATTTACCGATGGATCTACTCAATTTATTTCCAAACATGCATCCGAAAACG
ACCTACTCGGCGGACTATATATGCAGGTGGTGCATGTTCCGATGGATCTACTCCAGTTTG
GACAGGTCGGTTTCGGATGACAAGAATGGGCCAACTGTTAGTTATACTGAATGTGCAGGT
GGGGCCGGCCCCGTACCGTGCGATCACAGGGAACATGGACGAGTCAGCAAGACAGCAACC
CCTCTTCTGCCCGGTGGTCCTCGACCAAGTCACCTCAATATCTGCTAAACGACATGGACG
GCCTGGCCTCGAGCTCGCGTCTCATCCATTTCTGGCTGTTGGTTTCGTCGTAAAAATGCC
ACGAACGCACCGCCGTAGTACTCTACAAAATACCGCAGAGAATTTCCGACCAGTCGACAC
GGCGTCGGGCAGACATCAGCTGAGCTGAGATCATCAGCGCATACTCGTACGAAATACGTG
ACGGCCAAGTAGCCCCAGAAACTTCTACGCCGCACGCACGTTCCCCGCGTGAGCTAGCGT
GTAACTGCGCAGCACCCGGACCGACCGACCGACGCGCTCCGCCTTGCTAGACCAGACCGG
GCCGCGCTGCATATAAAACCTCGCCCGCCGCCGCGCCCAACGCCCACCACAGCCGATCCC
GTCGCGAAACCCAACGAGCGTGCGCGCACGCACGCTCCGTTGTCCCCCTCTCTCTCCCCA
CACAAAATGGAGCGGCAGCCTCGGCCGCAGCTCGCCGTGGCGGAGGAGGCCATCGCGCTC
TACGACACCTACTGGTTCCGCCGCCTCGTGCTCAGCAACGCCTGCCCTCCTCCCGCGCCT
CTGCCGCCGCCGGCGCCTGAGCGCGAGCAGCCGGAGCAGGCGCCGGCGGAGGAGAGCAAG
AGCGAGCTGCGGCGCGCTCCGTCGGGGCTGCAGCGGCACCGCCGGACGCGGAGCGACGAG
GCCAAGGCGGCCGCGTTCCACGGCCAGCTGGAGCCCCTCAAGATCCCCAACGGCCACCGC
GCGAGGCTCCAGACCATCCTGTCCGGGAAGGACGGCCTGGCCGCGCCGGAGCCGCTGCCG
CTGCCAGAGCGGCGGAGGCTGGAAGCGCGGCGGCCCGGCGGGAGGAGGCGGAGGAGCCGC
CGCGGGCGGAGCCTGTCGGAGCTGGAATTCGAGGAGGTGAAGGGGCTGCAGGACCTCGGC
TTCACCTTCTCCGAGACCGAGGTCGACGCCGAGCTCGCGTCCATCGTGCCGGGGCTCAGG
CGGCTGCGCGCGGAGGAAGAAGCCAAGAGAGCCAAGGCGGAGGCGGAGGAGGAAGCCTGT
AGAAGAAACAGGGCCGCCGCGGAGGCCTCCCACGCGGCGCCGAGGAGGCCCTACTTGTCC
GAGGCGTGGGAGGACGAGGAGGCGGAGGTGAGGAGGATGCTGAGCAACTTCAGGATCCCG
GCCGCCGCCGACGGCGCTGACCTCAAGGAGAACCTCCGGCTCTGGGCGCACACCGTGGCC
TCCGCCGTCCGGTGATGGCTTTGACCAAGAGCTCAACTTCTTTTTTTTGTTTGCCGTGCA
GTGGGTGGAATGATGAACTGTAAATATTTTTTGCCACGTGCATGCGCATCGATCTTTTCA
AGTTATTTTAGCAGGAGCTTGCGTTAGTTTAGTCACGACAATCTAAAATGTATTCAAATT
TCAAATTCAGCTGAATATAGGCTCTTGCAACTTGCAAGGAACAAAAAGGAGATGTGAAAA
TGGGGGTGCATAATTTTTTTGATCCGATGGACAGGCTGATCTGATATCATTGTTTTCCGT
GTCAGTGCTAAGAAAGCATTTCCGGTTGCTTTGAAGCCAAGAATTCTTCCATAATTCCGT
GTGAACTTTTATCATGTTGACATGACGTGACTGCGAGGAACAATCTAGAGCTGGGTGCCG
TTGATTTGTGGAAACAAGGTAGCGGCGCCGGTACAGCAAGGCCACGGCCACTGGCCACCA
GCTGCGTTGTTCTGAGAAAAGAGGAAATCAAATGATTCCATGTTGCCTCCCGTTCCCCAC
AAGACTCTCGCTCCATGGATTCCTTTTGGGAACCTCCATGCAGGTTAATCACGTGACGAT
GTGCGGTCGATGGTATCGTTGGCTTTGTTATAAGTATTGCCGAGTGATTAGTACTAGCAC
ATTTTCCAGGAGCACTAAAGTATTTGGGAGATTAGGGCACGTGAACTGTGCGATGCACGC
AGCGGATTCTCTGTTGCTTGTTGGTGGCCGCCTATTTGACGCGGTCTCACCAGATGGTAT
AGGCGTCGGTGTTTTCTAAGAGCAACTCTAACATATCCCGTAAAACGGTCGGTCCGAAAA
AAATCCGACGACTATACGGGTTTGGGCTCATTTTTTTACCAGAGCACACACTACAAACGC
GGTCCAACCTGGAAATTTTTTTGCGGTGGCCGTAAACGCGACCCCTCGACCGGTATAACT
GCGGGTTCGACCGCTGGATGCGGG