Contig Data
morexGenes
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Map Locations of contig_139751 (4397 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_139751

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7640 1 1192 bp MLOC_7640.1 Available Available LOC_Os12g17840.1, FRAME:+2, EVALUE:2e-41, 13112.m01891 protein ubiquitin family protein, expressed





CDS Structure of MLOC_7640






Contig Sequence (4397 bp)

>contig_139751 4397 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCACACACACATATGCGTTAATGGGCTGGACTCCCTATTTTTTTCATT
TGATTTTTTTCTTTTCTTTTCTCATTCTGTTTTCTTTCCTTCTTCCAACCAATTCAGGAT
TTTTAAATTTTAAAAGTTGCGATTTTTCAAACACATGTTCAAGAAGTCATAAAATGTATG
TGAATTCAAAAAATGTTAAGGAAATCATAATTTTTTTGTGGATTATAAAATGTTGGTAGT
TTTGCAAAATTGTTCACCAATTATAAAAAAAATTCAGGAAATAAAACCATGTTCATGATT
TTGAAAAAAATGATAGTGTATTCAAAACATATTAAGAATTCTGAAAACAAATGTCCATGA
AATTTTAGAAAATGTTCACACAAATTAAAAAACACAAAATTTTATTTATTTTGTCATATT
TATTTTTGAAAAAAATGATCAATTCAAAAAATGTTGGTGAGTAAAAAAAATGTTCAGGAA
TTCGGAAACTGTTCTTGCATTTCAACTATTCGTCATTTTTTAAAGAATACAAAATTTTAA
AACAATGTTTGTCGATTCAAAAATGCATTCACCAATTAAAAAAATTATGTCTAGGATTTG
ATTTTGAAAGTCTTTACTTGCCTACGCATTGGGAGTAATTCTTGGTCGATGAGTTTTTTT
TTGAAGTTTCAAACATTTCCTTGCACAATATAATGAAAAGTGTAGCGTGCAGTAGCAAGC
CCATAGCCTTGGGATTTACCATGTCGAATTCATTATGATCACGTGGACATCACATCATCA
TCAATGAGGCTGGAAGGAAAAATAAGCGGTAACATAATGAGCCACTGTGTTAAAATAGAA
GATGTTCATATGTCACGATATTGAGTTATACTTATTTGGCTAGCGCATAGTTTGTTTGTC
TCCCGTTGCAACGCACTGACATATTTTGCTAGTATATCTGAGAGATCATTTGTCATAATG
CCTGGATCGGTGCATGCACATACCAAGTATGTCTAAGAATGTATTTTCATAAATGCGTGC
ACAATAACTTTGGCAGATATCAGAATAACATTGAGTAAATATAATGAATGCAAATTTGTT
ATAAATGCACGTACATTAATTTGTACACATATGGTATCCTATCTGAGGATATATGTTATA
AATGCATATATATTACCTGCAATTCTTTTTGCCTATATACGTATTGTACTACCTCTATAT
ACTTGTGAAAGATGTAACCTTAATTTCTATGAATGAATATATACACGGAGGTACTTCAAG
CGGTCAAAAGAAATCTGAGGATAATAACAAGGATCGAGTAAATGATGGATCTGCAATGCA
ATATGTTGTATAAATAAAATGCCCGGCCGCGCCTAGAAATCGCACAAGCGATCGAATCGG
GATGGAGGTGACGTTCGAGACGACGCAGGGTCGCCGATTCATGGTTGAGATTTGGTACTT
GTCCACTGTGCGGAGGATCAAGGAGTACATCCTTAAGCAGGAGGGCATCCCCGTGGAGTC
CCAGCGGCTCTTCTTCCAGGGCAAGGAGCTCGAGGACGACCGCGACACCGAGCACTACCC
CATTGTGGAGGGGTCCCACGTGCTCATCGTCCTGCCGGATGACTCCCCCACTGCCGCCGC
CGACCGCCATGCCCCCGGCGCCGTCGTCGTCCACGTCGTCGCCACCGGGCCGGCCCTCGG
CCAGGGCCGCCGCATCGTGCTCGAACTGGACGCGTCGTGCACCGTCGCCCGCCTCAAGGA
GATGCTCCAGGAGCGCACGGACGAGGCGGTGGCGGCAACCAAGATGAGCGTCTTCTTCGG
CAAGGCGGAGATGGAGGACGACAAGGAGCTGGCGCAGTTCAACCCGCCCGTCGATGGGAT
GGATATGGAGGTGTGCGTGGTCGTGCGCCAGACGCCGCCGCCACCAGCGTGCATCAACGG
GAACGGGGCGGCCATGGTTAACAACCAGCGGCTGCAACAGCGGATATCGGTCGAGGTGAA
GTCGGGCGCCAAGACTGCGACGCTGGAGGTGAGCGACATGGATGCCGTCAAGGAGCTGCG
GGCGGAGCTGGGCACCGCGGCGCCGCACCTCCTCCTGCCCAACGACGGCGCCTACTTCTT
CATCTACAAGCAGAATGTCATGGAGGAGGACCGCACGCTGCGCTGGCACGACGTCAAGAC
CGGCGACACCATCGAGATCTTCAACGGCAGGGTCACCGGTGGCGCTTGATTCATCACACA
CATCACATCTTCCGTCGATCAGGTTTACAGATTCAGTTCAAAAAAGGATCAGGTTTACAG
ATCTGAATTGACCATTGAGTTATTATGTTGGATGGTACTGATCTTATCATTTCTATCGTG
TAAATTGGTGTAATGTTGAGTTATTAACGATCCGGAAAAAAATGATTACACCTGAAGATC
CTATTTGTTGGGTTAATAACTTAATATGTCAACACGAAAACCTATTCGTTTGCTCCTCAA
TGTTAGCGAACTTTGCATCTCTGTCTTTGGTAATTATCAACGGAACAATAGGGGGAACTC
CAACAATCTGTACTTACTTCTTTTTTGTCGCAAAGAAGATACTTTCATTTGCTATGAGCA
GGGGAAAATGGTAAGCTCTCCACTTGAGAGGATTATATAATCTCAGCCGTCTAATTGATT
AAGGGCCAAACTGGGTATACAAATAAGACTCACTCTGTTTCTATCTACTTCGCATATTAA
CTTTGTCTTGAGTCAAATTTTCAAAACTGTGTCCAAGTTTATACAAAAGTATATATTAAC
ATCCCCAATACAAAATCAATACCATTAGAATCAACATTCAATGCAATTTTCATATCATGT
GTATTTGTTATATTAAAAGTTTAGGTTGTTTTCAATGAACTTTGTCAAATTTATAAATTT
TGAATTAGGCCAAAGCTAATATGCCGAGTAAATAAAAAAATAGCATTGAATTAGGCCAAA
GCTTCGGTACTTTCTTTGGAATCTAGACTTCCATATATACTACATGTTCGTAAAAAAACT
ATTAGCACACACGTACTCATTTCACATTCAACGGTTGCAGAAGGAAAATAGTAGTATTAT
GTGCATCACTGGAACATGTAAAGTTCAATATTAATGAGTATATTTTGTATTTAATACATT
TACCATATAAATGCTCGAAGATATATATTATTATTGATGAATATATCTGGGGTACTTAGA
CCATCTACAACTGCAATACCCAAAAACCTCCCCAAACGCCCGTTGCGTGTCCGGCGGACA
GTAACCGGATGCCACACCCGAAACGTCCTCCATAACCTTGAAACTCAAAACTTCGCACCT
CAAATCCATAATACCCATGCAACACTAGTAGAAATAAAGGCTTTCGTCCTAGCCCCGATT
AAGCAATAGTCCCGTCCGACCTACGAACCGGGACTAATTCGTGCATCAGTCATGATTCGA
GCGGCCAGGACGCCGGTCGGGCCTCGGCGGGCACTAGTCCCGGTTTCAGCCATGAATCGG
GACTAAAGGGTCTGGCTCCTGACGCAACCCCTTTTGTCCCAGTTTGTGTCTGGAACCGGG
ACTAAGGGTCCGTCATCAGTCCCGGTTCTAGAAATCAACCGGGACTAAAAGAATGCCTAT
ATATATGCTCGTCCCTGCCTGCACTCACTCCTCTAATTTTTGGCCGGCTAGCGTGTGGGA
GGTGTGTGCTACTTTGTTCTCACCTCCTATGCACATGAGGTGTTCGATGAAATGACCGAG
CCACACTTAAGCTTTCTTTCCTCTCCAAGCTCGACCTCCAAGCTCCATTTCCCCCAAGAT
TTGTCTAGTTTTGACGATGCGCCAACTATCCAAGTGTTCTAAAAAGGTTAGCAACTTCAT
CATCATCTCTCACTACTTGTTTAGCTCATTTCAAATGTTCTAGAAGTAGTGTGGTTTGTG
GGTTTTAGTGGAGGAGTAAGTTTATTTGATTTAGATGCACAATTTGAGGTCAAATTAACT
TTTTAGTTTGCACATGTGTAGGGCGTCGTTCCGACCCCGTGCCCGTCGCCCTCACCCCCG
TAGATTGTCCGTGCCGATCTCGTTGCCTGCACCACCGTGGCGATCCTCTTGTTCTTAGTT
ATCTTTTTTTAGAGAAAAAAAGTTATGACTTGTATGATTTATATACCTACTTCTATAATA
TTCTTAGTTTTATTATTGTTTGTTATTACATAGTGCCATGGTTTTGGTATCCGCCCCATC
CGCTCTGGTCCGGTCTATGATTCAGATGTAGTATATTATCTTTTATCACTATTTGTTTCA
CATAGTGTTTATGACAATTATGCCAACTAACTTGACATAGATGTCTTTATCTAGGAGGTA
TGTGAACCGAAAATTCCAACCGACCCTCTTGTCAAGAGGTTAAATCTAGTTGAAAAAGAA
AACAATTATTTGAAAGA