Contig Data
morexGenes
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Map Locations of contig_139650 (4202 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_139650

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_7609 1 790 bp MLOC_7609.1 Available Available LOC_Os05g38940.1, FRAME:-2, EVALUE:1e-11, 13105.m04097 protein hypothetical protein





CDS Structure of MLOC_7609






Contig Sequence (4202 bp)

>contig_139650 4202 assembly3_WGSMorex_rbca.fasta
ATGAGAGGGGGAAGATGATGATTGTGTGATGTAAACTATTAAACCATGCATCAATGATCT
TTATTTTTGTGTCTGTTTGAAGGTTGATTTTGTTTTTCTAGTAAAAATTGTGATATGCCA
AATGACAGATTTAAGGATTAGGGCTGGGGGCTCTGTTATAAGGGTTGGGTTTGAGGGTTC
TAGTCTTTGTCCTTATTTTTCAACCCTTAAAACTGTCAAAAATGATCAATTCTCAACCTT
AAAACAGGTTTTAGATTTAAGGGCTCTGCTACACATGCTCTTGTTCTTGGTAGTGCTTGC
ACCTCACTCATATTTCCAGTTGAGATTTTCTTTGATTTTCACCCGCAAAAAAGACGAGGT
TTCTTTGATTTGTGGTGTATTGGTGGTAGATCTCGAAAGACATTGGTTTCAGATAAATGA
AATCGGGGGGCAGTTCTCTTTGTCAAAGTGAAAATAAAAATACCAGGACAAGATGGATCT
GCCAGTCTCTGAACTCCCTTCAGTCTGTATTTGCTCAGTCGTGCGTTCTACATAGAGCTA
TTTGAGTGAGCCAGATTATAGCGTTGTGAAGAAAACAGGAGTACTGCAAGTCTGCAACTG
CAGGTGAGTATATCACATACGAAAATCAACATAACCTCTCTATCCATCTGTACAATCGGA
CTATCGGGGGACTCTGTACAGTCGGAGAACACCGAGGAAGAAGAACCACTATATATGGAA
CAGTCTCCCAGCTACCAAGTACGCAGTACTAAAAAGCTAATCAGGTCTGAAGCAAGAGGC
GTCCGTGCGAGTGATCGTATCCGACACTCGGCGCCGTCTCGAGCTTCAGTTGTAGGTGCC
GAAGCTGGTGCGAGCCGACGCCCTCTTATCCGCGCCCGCGCCGTCGTTCCTCGGCGCCAT
GAGGTTGCTGATGGTCCTCACGATCTGCCGCTTCAGCTGCCCCCTCTTCAGCGGTGGCCT
CCTCTCCTTTGAGCTGCCGTAGTTGCTGATGCCAACGCCGCTGTTGCTGTAGGAGTGCTC
CATGGCTCTTCTTTCTGTGTTGCTTCTTGCCTTCTCCCTCTTGTGTGTGTGTGTGTGTCT
AGTGTGAAGAGGGCATGAGAGGTGAAAAGCACATTTATAGGCCAGCAAGATCATCTATCT
GTGGTGCGCCTTGCCGCACATGTTAAATTGTCCTTGGGGAAATGATAATTGCCTGCAAGG
CGCTTGACTTTCAAGGTTCAGTGCATAGGCTGCTAGTGCTGGTGGTGAGTGGTGAGTGGT
GAGTGGTGACCTTTTCCTCCGGGAGCGGTGCTGCTGCCTCTTGACTGTTTCCGGCCTCCG
AGATGCATGTGAACGTGACGGCTCTGCTGGTTTGTACTACTACGTACTGTAGGGAGGTTC
AAGGTTCACTGCATCTCTCTCTAGCCACTAGCCCTGCTCCTGGTGGACGTTGGCTCGGGG
TGTCAACTTGGGTGGCGCCCACGTGGTCGACCGTGGAATATCTTGGTCATGAGTCGATCA
TGACCTTATCGCCTACGTGGTGCCTGTGCCTCTTCTTAACTGTGACGAGATATTTGCCAT
GCGGAAAGCAGGTGTCAATGGTCATAGCAACTCCAACCGAACCAATACATTTTATCCGTT
CATATATTATGGATCGTCGCCGACAAAAAACCACCCCAAAAAGAAATGTTCGAACAAATT
CATTTCCGTCTTAAATTTAAATTAGATTTGGATAGGAGGCGGACATGAAACGGACGGCTG
ACCTCTCTTTTTTCTCCGTCTGTGTCCTTCGCCGGCCCACATGGCAGCCAAATAAATCGT
CAATCTCAATATGTACGTTGTTGTGCATGTTAGCTACTCCATCCGTTCCTAATATAATTT
TTTTTACAGATTTTACTAGAGGATTACATATGGATGTATATAGACATAATCTAGAATGTA
GATTCATTCATTTTGCTTCGTATGTAGTCATCTAGTGCAATCTCTTAAAAGACTTATATT
TAGGAACGGAGGGAGTACTTGCCAGCTGCTAGCCGACCTGTCGGACGAGCTACCCATGAG
GACCTTGTGGACTCGCGGGGCACTGCGACTAAATCGAGAATGGTTTCATATTTAAACCAT
ATTTGAACCATATACATAGATTTATCTTTTAAAATCATACTTAAACCGTATTCATTTGAT
GTTATTTTCAACCCAACCAAAACTAAACTCATTATTTTTTCCATCCAAACCAACTTAAAT
CCAATACATAACCGTGGGTTTAAAACCAATACATAACTATGGGTTTGCTTTAATATACAT
ATAATTGCACAAGTGGACAAGTTAAGAAGCAAATGAGATAGAAAATACATAAATGCATCT
ACAACAGTTTGAGAACAAAATTATCCTTGAGATACAGTCAACACACAACAAAATGCAAAA
AAAAAATGTCCACGTCTGAATAGCTCACTAATTAACAAGTGTATTAAAATAAAATTACTT
AGCCAAAGCACAAGCAAACACTTCCGTTTTTCATGTGGTATTTCATCATAATACATACTC
CCTCCGTTCCTAAATATATGTCTTTGTAGAGGTTTCACTAGTGAACTACATACGGATGTA
TATAGACATACTTTATAGTATACATTCAATCATTTTTCTCCGTATGTAGACCACTAGTGA
AATAGCTTAAAAGACTTATATTTAGGAACGGAGGGAGTAATTACGTAGTGCACTACAACA
TGCATGCTGATCAAAAATATTCGTTCTTGGTCATCGTTGGTTATTGCACATAACCAATGC
CTAAAGACCGGTTTAGACGCATAGTTTATAACCATTTATAATCAAACTATTTAAACCCAT
AACCAACTATACCCAAACTGGTTTCTCCACATACCCAAACCAAAACCAAACTAAAAAAGG
CTAAGCCGAGTAAAACCTAAACCAATCAAACCCAAAGTAATAACCGAACCGTTACACCCG
GTTTTTTAATAACCATTCCCAGGTTTAACTGCGACATGCACGCCACCGTCTTCGTCATAG
GGCCACCTCCGAAGACTCCCGCAAGACGCCGTCGTAGGCGCGCATGGGGTGCTATGTGTT
GTCTCGCCTAGTCGCCTCACCCATTCTGTGCAACTCCTGGGACTCATAGTCTGCGGTGCG
GGTGGCGGGGCCGACTTGCCGCCTGCTGAAGAAGAGGAGCTCGGAGCGACGGCGAAGGGC
GACGCAGCGGGGCCGCGACATGGATGTGGGCGGCGGCTCGTTGGCGTGGCAGACGGAGGC
GAGCCCGCATGAAGCCGGCGAGGGCACCGTCGGACTAGGCCACCGTAACCCAGTGCGTGT
ATGTGTGCCATCGTCACCGCATTGAGCCACAAAACGCGAGTGCATGCAGCCGTGCGATGG
GCGCCGCCACCACGTGTGTGTGCCACAACGTGTGCTCCCGGCGGCCACCTCGTGTGCGAG
CTGCCACACACGCTCGTTGATGCGGGTAGTTGCGGGGAAGCGCGGAGGTGAGCTCGTGGA
CACGGGCGGCCATCATCCAGCGTCAACACGGTCCTGAGGCTTCCATGTCGTCTCATCATG
GCACCGCGAAGTGGGGCATGTACAACGAAGAAGGGGAGCTAGGACTAGGGACAACAGCAC
CGTCACCACGTGAAAGGGCCCAGCCTCCACCGTCAACGACGATAACCGAACGAACGCAAC
AACAGAAGCATACCAGGCTCGACCAGGCCCTGAGATGCACGTAGAGCTCCCGCCGTCACG
CTGCAAGAGGCACGCCATCAGCGCCTCCACCCCTTGTCCGAACTGCTCCTCCTCCTCACC
GCGCAGTAGGCGTCGAAGCAGCGCTAGAGCCGGTGATGGGGATATGTACCTAGGGTAGGG
CCATAGGNNNGACCTACATGTCCTACCTAAGGGCGCCTCATTAAAGACTTGAAGACTACA
AGGAGGGTTCCGACTAGATAGCCATAGCGTCTGGATCATTCGGTAAGCAATCACTTGGAG
AATTCCCCCCTTCACTCGACAATCATCTTCCACTCGGAAGAAGCAGAAGCCACTCGACGC
AAAAGACCAGAAGCCACTCCAGGGAGGTCGACGGGCGAGCGTTCGGCTGGTCGTCATAAG
TAACATTAATTACGTATGTTATCAGTAACGTAGGCCTTTAAGCTCCATTGATCGAACCCT
TGGTTGCCTAGTATTGATGAGGGGCAACGCACTCTATATAAGCCACCCCTCCCCTCTCCC
AC